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Properties
| Property Name | Value |
|---|
| TranscriptId | 573139 |
| Track | FilteredModels2 |
| ProteinId | 573053 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1204264..1205436 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1671 ID=mRNA_1671|Name=jgi.p|Nanoce1779_2|573053|organism=Nannochloropsis oceanica|type=mRNA|length=815bp
AGGCAGCCATGGCATCGACGCTTCTGGCGAAGACGATGCTCCGCCAGGCC
GTGGTAGTGGGAGCCCGCGGGCCAGCAGTTGCAGCGAGAGCGGCCGGCGT
AGGGAGCACCGGGAGCAGCAGAGGTCTTTCTTGGGTCAAGGACGTGACAG
TGAACGTCACCTTTATCAACCATGAAGGTCTGAGGATAACAGTGCCGGGC
CGAGTGGGACAAAGCTTGCTGGACGTGGCGCAGATGCACGACATCGAGTT
GGAGTCAGGATGCGGGGGTGGTGGGGCCGAGCAGCAGAAAAAGCATTCGG
AACGGTGGACGGAGGACTTGTTTGGACGAGGCCCCTGCTGCCACTTCTGC
CACGTTAAGATTCCTTCCCCCTGGATCGACTTTGTGGAGGATAAACAGCC
GGCGACGGATAAGGAGAATGAGCTGCTACAGGAGCATTGGGTGGAGGAAG
CCTCGGCAAACTCTCGATTGGGGTGTCAAGTGACGTTGACCAAATCCTTG
GACGGAATTCAGGTATTTATCCCGGATGGACCGCCGGCAGATTGCCCGTA
GACTCACTTGACCGATTGATATGGATGGATGGACGGATTGAGAGGAGGGA
GGGAAGGAGGGAGGTTTGTCGCGGCGTTCAGGAACGAGGTGTGGGCAGGG
GCTTCAGAGCCCTAGGGTAGTTAGTACAAGCGACAAGCGAGCTAGGAAGT
GCAGAGGCCTTTTTTATACGAGTAGGGGAAGTGGAGTGGAAACAGTGAGG
ATGACGAATAGAGGAATACGGGGAAAGAACACCGTGCACAAATGATGAAA
TCAGTTGAGAACAGA back to topprotein sequence of jgi.p|Nanoce1779_2|573053 >mRNA_1671-protein ID=mRNA_1671-protein|Name=jgi.p|Nanoce1779_2|573053|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MASTLLAKTMLRQAVVVGARGPAVAARAAGVGSTGSSRGLSWVKDVTVNV
TFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAEQQKKHSERW
TEDLFGRGPCCHFCHVKIPSPWIDFVEDKQPATDKENELLQEHWVEEASA
NSRLGCQVTLTKSLDGIQVFIPDGPPADCP* back to topmRNA from alignment at scaffold_1:1204264..1205436- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1671 ID=mRNA_1671|Name=jgi.p|Nanoce1779_2|573053|organism=Nannochloropsis oceanica|type=mRNA|length=1173bp|location=Sequence derived from alignment at scaffold_1:1204264..1205436- (Nannochloropsis oceanica)
AGGCAGCCATGGCATCGACGCTTCTGGCGAAGACGATGCTCCGCCAGGCC
GTGGTAGTGGGAGCCCGCGGGCCAGCAGTTGCAGCGAGAGCGGCCGGCGT
AGGGAGCACCGGGAGCAGCAGAGGTCTTTCTTGGGTCAAGGACGTGACAG
TGAACGTCACCTTTATCAACCATGAAGTAAGTATAGAGTGTGTGTATGTG
TTGAATGCGACAAAATGTAGGGATAATATGGACCGTTGGCATTTAAAAGG
CCTCAATCAGCCACTAATGCCTTCCCCTATCCCCTCGCACCTCTCGCACA
CACATATCAGGGTCTGAGGATAACAGTGCCGGGCCGAGTGGGACAAAGCT
TGCTGGACGTGGCGCAGATGCACGACATCGAGTTGGAGTCAGGATGCGGG
GGTGGTGGGGCCGAGCAGCAGAAAAAGCATTCGGAACGGTGGACGGAGGA
CTTGTTTGGACGAGGTGAGTGAGCGTGGGAGGAAAGCGAGAGGGGAATGA
GGACGGCAATTCTATGGCAACGACTGTCGATTTAGTGGAGCAGGAAACAG
GTATAAGTAGCGTTACCACCTGAGTGTGAATGGTTTGGTAGCGTCGCTTT
GCGACACCGTTAATGCCAGGGCCCAAATTCTTCTCTAGAGTAGTTGCTCA
CTTCCTCTCCCTCCTTCCCCCTCATTCATCCTCTACAGGCCCCTGCTGCC
ACTTCTGCCACGTTAAGATTCCTTCCCCCTGGATCGACTTTGTGGAGGAT
AAACAGCCGGCGACGGATAAGGAGAATGAGCTGCTACAGGAGCATTGGGT
GGAGGAAGCCTCGGCAAACTCTCGATTGGGGTGTCAAGTGACGTTGACCA
AATCCTTGGACGGAATTCAGGTATTTATCCCGGATGGACCGCCGGCAGAT
TGCCCGTAGACTCACTTGACCGATTGATATGGATGGATGGACGGATTGAG
AGGAGGGAGGGAAGGAGGGAGGTTTGTCGCGGCGTTCAGGAACGAGGTGT
GGGCAGGGGCTTCAGAGCCCTAGGGTAGTTAGTACAAGCGACAAGCGAGC
TAGGAAGTGCAGAGGCCTTTTTTATACGAGTAGGGGAAGTGGAGTGGAAA
CAGTGAGGATGACGAATAGAGGAATACGGGGAAAGAACACCGTGCACAAA
TGATGAAATCAGTTGAGAACAGA back to topCoding sequence (CDS) from alignment at scaffold_1:1204264..1205436- >mRNA_1671 ID=mRNA_1671|Name=jgi.p|Nanoce1779_2|573053|organism=Nannochloropsis oceanica|type=CDS|length=1629bp|location=Sequence derived from alignment at scaffold_1:1204264..1205436- (Nannochloropsis oceanica)
GCCCCTGCTGCCACTTCTGCCACGTTAAGATTCCTTCCCCCTGGATCGAC
TTTGTGGAGGATAAACAGCCGGCGACGGATAAGGAGAATGAGCTGCTACA
GGAGCATTGGGTGGAGGAAGCCTCGGCAAACTCTCGATTGGGGTGTCAAG
TGACGTTGACCAAATCCTTGGACGGAATTCAGGTATTTATCCCGGATGGA
CCGCCGGCAGATTGCCCGTAGGGTCTGAGGATAACAGTGCCGGGCCGAGT
GGGACAAAGCTTGCTGGACGTGGCGCAGATGCACGACATCGAGTTGGAGT
CAGGATGCGGGGGTGGTGGGGCCGAGCAGCAGAAAAAGCATTCGGAACGG
TGGACGGAGGACTTGTTTGGACGAGATGGCATCGACGCTTCTGGCGAAGA
CGATGCTCCGCCAGGCCGTGGTAGTGGGAGCCCGCGGGCCAGCAGTTGCA
GCGAGAGCGGCCGGCGTAGGGAGCACCGGGAGCAGCAGAGGTCTTTCTTG
GGTCAAGGACGTGACAGTGAACGTCACCTTTATCAACCATGAAGCCCCTG
CTGCCACTTCTGCCACGTTAAGATTCCTTCCCCCTGGATCGACTTTGTGG
AGGATAAACAGCCGGCGACGGATAAGGAGAATGAGCTGCTACAGGAGCAT
TGGGTGGAGGAAGCCTCGGCAAACTCTCGATTGGGGTGTCAAGTGACGTT
GACCAAATCCTTGGACGGAATTCAGGTATTTATCCCGGATGGACCGCCGG
CAGATTGCCCGTAGGGTCTGAGGATAACAGTGCCGGGCCGAGTGGGACAA
AGCTTGCTGGACGTGGCGCAGATGCACGACATCGAGTTGGAGTCAGGATG
CGGGGGTGGTGGGGCCGAGCAGCAGAAAAAGCATTCGGAACGGTGGACGG
AGGACTTGTTTGGACGAGATGGCATCGACGCTTCTGGCGAAGACGATGCT
CCGCCAGGCCGTGGTAGTGGGAGCCCGCGGGCCAGCAGTTGCAGCGAGAG
CGGCCGGCGTAGGGAGCACCGGGAGCAGCAGAGGTCTTTCTTGGGTCAAG
GACGTGACAGTGAACGTCACCTTTATCAACCATGAAGCCCCTGCTGCCAC
TTCTGCCACGTTAAGATTCCTTCCCCCTGGATCGACTTTGTGGAGGATAA
ACAGCCGGCGACGGATAAGGAGAATGAGCTGCTACAGGAGCATTGGGTGG
AGGAAGCCTCGGCAAACTCTCGATTGGGGTGTCAAGTGACGTTGACCAAA
TCCTTGGACGGAATTCAGGTATTTATCCCGGATGGACCGCCGGCAGATTG
CCCGTAGGGTCTGAGGATAACAGTGCCGGGCCGAGTGGGACAAAGCTTGC
TGGACGTGGCGCAGATGCACGACATCGAGTTGGAGTCAGGATGCGGGGGT
GGTGGGGCCGAGCAGCAGAAAAAGCATTCGGAACGGTGGACGGAGGACTT
GTTTGGACGAGATGGCATCGACGCTTCTGGCGAAGACGATGCTCCGCCAG
GCCGTGGTAGTGGGAGCCCGCGGGCCAGCAGTTGCAGCGAGAGCGGCCGG
CGTAGGGAGCACCGGGAGCAGCAGAGGTCTTTCTTGGGTCAAGGACGTGA
CAGTGAACGTCACCTTTATCAACCATGAA back to top
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