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Properties
| Property Name | Value |
|---|
| TranscriptId | 549614 |
| Track | FilteredModels2 |
| ProteinId | 549528 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1135160..1136235 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1638 ID=mRNA_1638|Name=jgi.p|Nanoce1779_2|549528|organism=Nannochloropsis oceanica|type=mRNA|length=885bp
ACAGACACTTGTCCTGTAACAACTACGAAGATGCAGCAGGTCGAAAGGCT
GCAGCGGGGCCTGAATTTTGACCTGCCGGCGGCTGCTGGTAACCCTGCCT
TCAATACCAACAAGGGCTTAGGCCGCGTTGGCCTGGCGGGTTTTGTGCTG
GGCGGGCTCTGGGGTGTCCATTTCACAGCCTTTTTCGTGTCCCTTTTCTT
CTTATCAAGGAGCGCACTATGGTTGTTACGTTGGAGTGCATATATGGTCT
CGCTGTGTCTCTTTCATTTCATGGAGTTCCTCAGCACGGCGCTGTATAAG
CCAGAGACGGTTACGTATGATTCCTTCATCATCAACCACTCAAAAGAATA
CACCATCGCTGCCTTGGCCGCTTGGGTGGAATTCTGGGTCGAGCTCTGGC
TCTTCCCTGGACTCAAGACCCGTGGCGTGTTCACCTTTCTGGTGGGAGGT
CTGTTGCTGGTTGCGGGACAAGCATGTCGCATCGTCGCCATGCACACAGC
CCGGGGCCACTTTTCGCACACCATCATGGAGAAACATTCGGAGGGACACC
AGCTCGTGACGCATGGAATTTATTCCTACCTACGCCATCCTTCTTATTGT
GGGTGGTTCTGGTGGGTTGTTGGGATGCAGGTGCTGCTTTGTAATCCTGT
GTGTGCTTTAGCCTATGCGTGGGTGAGCTGGAACTTCTTTGCGTCGAGAA
TAGAGTATGAAGAGGTGACGTTGAGGAGATTTTATCCACATCAGTACCCA
GAATATTGCCGGCGGACGGTGGTGGGGATTCCGTTTACTAGATGAGGAGG
AGGGAGCGATGCAGAGAGGGGGAGCGAGGGAGGGAGGGAGAGGTCTCGAA
TGAAGTACATAGAAAAAAGCATGTGATTAGTTGGG back to topprotein sequence of jgi.p|Nanoce1779_2|549528 >mRNA_1638-protein ID=mRNA_1638-protein|Name=jgi.p|Nanoce1779_2|549528|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MQQVERLQRGLNFDLPAAAGNPAFNTNKGLGRVGLAGFVLGGLWGVHFTA
FFVSLFFLSRSALWLLRWSAYMVSLCLFHFMEFLSTALYKPETVTYDSFI
INHSKEYTIAALAAWVEFWVELWLFPGLKTRGVFTFLVGGLLLVAGQACR
IVAMHTARGHFSHTIMEKHSEGHQLVTHGIYSYLRHPSYCGWFWWVVGMQ
VLLCNPVCALAYAWVSWNFFASRIEYEEVTLRRFYPHQYPEYCRRTVVGI
PFTR* back to topmRNA from alignment at scaffold_1:1135160..1136235- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1638 ID=mRNA_1638|Name=jgi.p|Nanoce1779_2|549528|organism=Nannochloropsis oceanica|type=mRNA|length=1076bp|location=Sequence derived from alignment at scaffold_1:1135160..1136235- (Nannochloropsis oceanica)
ACAGACACTTGTCCTGTAACAACTACGAAGATGCAGCAGGTCGAAAGGCT
GCAGCGGGGCCTGAATTTTGACCTGCCGGCGGCTGCTGGTAACCCTGCCT
TCAATACCAACAAGGGCTTAGGCCGCGTTGGCCTGGCGGGTTTTGTGCTG
GGCGGGCTCTGGGGTGTCCATTTCACAGCCTTTTTCGTGTCCCTTTTCTT
CTTATCAAGGAGCGCACTATGGTTGTTACGTTGGAGTGCATATATGGTCT
CGCTGTGTCTCTTTCATTTCATGGAGTTCCTCAGCACGGCGCTGTATAAG
CCAGAGACGGTTACGTATGATTGTAAGTTGTGATCGGGGGGAGCCCATGG
TTGTGTCTCTGTGATTGCTGCACTAACCGCCACCTGATCTTTCATTTACC
CTTCCTTATTTACCCCTCCAACCTCTCGGACAAACCTTTCTACAACCCCA
CCCCTCACGAAGCCCCCCCCTCCCATCTTACCACTCCTCTCTCCCACATT
CTCACTCCCAAAGCCTTCATCATCAACCACTCAAAAGAATACACCATCGC
TGCCTTGGCCGCTTGGGTGGAATTCTGGGTCGAGCTCTGGCTCTTCCCTG
GACTCAAGACCCGTGGCGTGTTCACCTTTCTGGTGGGAGGTCTGTTGCTG
GTTGCGGGACAAGCATGTCGCATCGTCGCCATGCACACAGCCCGGGGCCA
CTTTTCGCACACCATCATGGAGAAACATTCGGAGGGACACCAGCTCGTGA
CGCATGGAATTTATTCCTACCTACGCCATCCTTCTTATTGTGGGTGGTTC
TGGTGGGTTGTTGGGATGCAGGTGCTGCTTTGTAATCCTGTGTGTGCTTT
AGCCTATGCGTGGGTGAGCTGGAACTTCTTTGCGTCGAGAATAGAGTATG
AAGAGGTGACGTTGAGGAGATTTTATCCACATCAGTACCCAGAATATTGC
CGGCGGACGGTGGTGGGGATTCCGTTTACTAGATGAGGAGGAGGGAGCGA
TGCAGAGAGGGGGAGCGAGGGAGGGAGGGAGAGGTCTCGAATGAAGTACA
TAGAAAAAAGCATGTGATTAGTTGGG back to topCoding sequence (CDS) from alignment at scaffold_1:1135160..1136235- >mRNA_1638 ID=mRNA_1638|Name=jgi.p|Nanoce1779_2|549528|organism=Nannochloropsis oceanica|type=CDS|length=1530bp|location=Sequence derived from alignment at scaffold_1:1135160..1136235- (Nannochloropsis oceanica)
CCTTCATCATCAACCACTCAAAAGAATACACCATCGCTGCCTTGGCCGCT
TGGGTGGAATTCTGGGTCGAGCTCTGGCTCTTCCCTGGACTCAAGACCCG
TGGCGTGTTCACCTTTCTGGTGGGAGGTCTGTTGCTGGTTGCGGGACAAG
CATGTCGCATCGTCGCCATGCACACAGCCCGGGGCCACTTTTCGCACACC
ATCATGGAGAAACATTCGGAGGGACACCAGCTCGTGACGCATGGAATTTA
TTCCTACCTACGCCATCCTTCTTATTGTGGGTGGTTCTGGTGGGTTGTTG
GGATGCAGGTGCTGCTTTGTAATCCTGTGTGTGCTTTAGCCTATGCGTGG
GTGAGCTGGAACTTCTTTGCGTCGAGAATAGAGTATGAAGAGGTGACGTT
GAGGAGATTTTATCCACATCAGTACCCAGAATATTGCCGGCGGACGGTGG
TGGGGATTCCGTTTACTAGATGAATGCAGCAGGTCGAAAGGCTGCAGCGG
GGCCTGAATTTTGACCTGCCGGCGGCTGCTGGTAACCCTGCCTTCAATAC
CAACAAGGGCTTAGGCCGCGTTGGCCTGGCGGGTTTTGTGCTGGGCGGGC
TCTGGGGTGTCCATTTCACAGCCTTTTTCGTGTCCCTTTTCTTCTTATCA
AGGAGCGCACTATGGTTGTTACGTTGGAGTGCATATATGGTCTCGCTGTG
TCTCTTTCATTTCATGGAGTTCCTCAGCACGGCGCTGTATAAGCCAGAGA
CGGTTACGTATGATTCCTTCATCATCAACCACTCAAAAGAATACACCATC
GCTGCCTTGGCCGCTTGGGTGGAATTCTGGGTCGAGCTCTGGCTCTTCCC
TGGACTCAAGACCCGTGGCGTGTTCACCTTTCTGGTGGGAGGTCTGTTGC
TGGTTGCGGGACAAGCATGTCGCATCGTCGCCATGCACACAGCCCGGGGC
CACTTTTCGCACACCATCATGGAGAAACATTCGGAGGGACACCAGCTCGT
GACGCATGGAATTTATTCCTACCTACGCCATCCTTCTTATTGTGGGTGGT
TCTGGTGGGTTGTTGGGATGCAGGTGCTGCTTTGTAATCCTGTGTGTGCT
TTAGCCTATGCGTGGGTGAGCTGGAACTTCTTTGCGTCGAGAATAGAGTA
TGAAGAGGTGACGTTGAGGAGATTTTATCCACATCAGTACCCAGAATATT
GCCGGCGGACGGTGGTGGGGATTCCGTTTACTAGATGAATGCAGCAGGTC
GAAAGGCTGCAGCGGGGCCTGAATTTTGACCTGCCGGCGGCTGCTGGTAA
CCCTGCCTTCAATACCAACAAGGGCTTAGGCCGCGTTGGCCTGGCGGGTT
TTGTGCTGGGCGGGCTCTGGGGTGTCCATTTCACAGCCTTTTTCGTGTCC
CTTTTCTTCTTATCAAGGAGCGCACTATGGTTGTTACGTTGGAGTGCATA
TATGGTCTCGCTGTGTCTCTTTCATTTCATGGAGTTCCTCAGCACGGCGC
TGTATAAGCCAGAGACGGTTACGTATGATT back to top
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