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Properties
Property Name | Value |
TranscriptId | 522488 |
Track | FilteredModels2 |
ProteinId | 522402 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:1075364..1077383 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1612 ID=mRNA_1612|Name=jgi.p|Nanoce1779_2|522402|organism=Nannochloropsis oceanica|type=mRNA|length=1497bp ATGGCTAAAGAACAAAGACATCCATTCTTTCTTCCCTCATCCCTTTTGTC ACATCTCAAAGTGCTCAAACTCCCCCCAAAACCCCAACCCCCCTGCTCTT TTTTCTTCCCCTTCCCGCACAGCGCCCCAAACGAGCTCCTCCTTGAGCCA CCTGACGAGAACACGCTCCGCATCATGATCGCAACCGACAACCACGTAGG CTTCCTGGAGCGGGACCCCGTCCGAGGTCCTGACTCGTTCGCGGCGTTGG AGGAAATCTTCCTCCGCGCCAAGGAATACCACGTGGATTTCGTCCTGCTC GGTGGGGACTTGTTTCACGACAATAAACCCTCGCGCAAGACCATGCATTC GACGATAAGCATCCTCCGTCGCCATTGCCTCGGGGATGATCCCGTCTCTT TTCAAGTTATATCCGAGCCCCCGCCCCAGGGCGGGACGGAAGGCACGATG GACGGCATGAACAAAGTAGGGAACTTCGCGCACGTCAATTATGAAGACCC GAATTACGCGGTGGGACTGCCAATTTTTTCGATTCATGGCAATCATGATG ACCCCTCCAGGGACGGGAACACGGAGCCTTTGTCGGCGATGGACTTGTTG AGTGTCACCAACCTGGTCAATTATTTCGGAAAGGCATCCGCTACTGACAA TGTGGAGGTGAGCCCTCTGTTGTTGCGGAAGGGGGGCACCCTGATGGCGT TGTACGGGCTGGGGAACATGAGGGATGAACGCTTGAATCGGATGTGGCAG AAAAAGAAGATCAGGTTCCTTAGGCACCGACCCACGGGCAGGGACGAGGA GCAGAAGGATTTCTTCTCGCTTTTTGCATTGCACCAGAACAGGGATACGG GAAGGGGACAGAAAAATTGTGTGCAGGAGAGCATGATTCCCGAGTGGATG GATCTGGTGGTGTGGGGACACGAACACGAATGCCTCGTCCGCCCCACCCG TTCGCTTGCCGGTGGTTTCTTCATCTCCCAGCCCGGGTCCTCTGTTGCCA CCTCGCTGGTGGAAGGAGAGGCGACTCCGAAGCAAGTCGGCGTCCTAGAT GTGAGGGAAGGAAATTTTCGTCTCTTCCCCGTTCTCCTCCGACAGGTCCG TCCCTTCATCCTGAAGGCAATCCGCCTCTCGGCTATCGAGGGCCTGGATC CCAATCATCCCAAGGTCGAAGAACACGTCACCCTCGTCCTCGAAAAGCAG GTGTGGGCGCTGATCGAGGAAGCGAGGGAGGAGCACCCGCCCCCTGGCCC CCTTCCTGGACAGACCTTCTCTTTGCTTCACCCAGAGCAGGTTCTCGTGC GGCTTAAGGTTGAATACACCGGATTTTTTACGATCAACAATCAGCGGTTT GGGCAGCGATTCGTTGGACACGTGGCGAACCCCTCCGACATTTTGTTGTT TCACAAGGCGCGGAGGCTGGGGGGGAGGGAGGAGGAGGAGGAGGAGGAGG GAGGGGGGGGGGGGGAAGAGGAGGAAGGGCGGGAGGGGGGGGGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|522402 >mRNA_1612-protein ID=mRNA_1612-protein|Name=jgi.p|Nanoce1779_2|522402|organism=Nannochloropsis oceanica|type=polypeptide|length=499bp MAKEQRHPFFLPSSLLSHLKVLKLPPKPQPPCSFFFPFPHSAPNELLLEP PDENTLRIMIATDNHVGFLERDPVRGPDSFAALEEIFLRAKEYHVDFVLL GGDLFHDNKPSRKTMHSTISILRRHCLGDDPVSFQVISEPPPQGGTEGTM DGMNKVGNFAHVNYEDPNYAVGLPIFSIHGNHDDPSRDGNTEPLSAMDLL SVTNLVNYFGKASATDNVEVSPLLLRKGGTLMALYGLGNMRDERLNRMWQ KKKIRFLRHRPTGRDEEQKDFFSLFALHQNRDTGRGQKNCVQESMIPEWM DLVVWGHEHECLVRPTRSLAGGFFISQPGSSVATSLVEGEATPKQVGVLD VREGNFRLFPVLLRQVRPFILKAIRLSAIEGLDPNHPKVEEHVTLVLEKQ VWALIEEAREEHPPPGPLPGQTFSLLHPEQVLVRLKVEYTGFFTINNQRF GQRFVGHVANPSDILLFHKARRLGGREEEEEEEGGGGGEEEEGREGGG* back to topmRNA from alignment at scaffold_1:1075364..1077383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1612 ID=mRNA_1612|Name=jgi.p|Nanoce1779_2|522402|organism=Nannochloropsis oceanica|type=mRNA|length=2020bp|location=Sequence derived from alignment at scaffold_1:1075364..1077383+ (Nannochloropsis oceanica) ATGGCTAAAGAACAAAGACATCCATTCTTTCTTCCCTCATCCCTTTTGTC
ACATCTCAAAGTGCTCAAACTCCCCCCAAAACCCCAACCCCCCTGCTCTT
TTTTCTTCCCCTTCCCGCACAGCGCCCCAAACGAGCTCCTCCTTGAGCCA
CCTGACGAGAACACGCTCCGCATCATGATCGCAACCGACAACCACGTAGG
CTTCCTGGAGCGGGACCCCGTCCGAGGTCCTGACTCGTTCGCGGCGTTGG
AGGGTAGGTCTGGTCGACTAAATTGGCCTGCGTACTGGAGAGGATAGCTT
TTGGCTATCGATTCTTAATATCACCTTTTCATTACCCCCGTGTATCTCAA
TCACTGTCATAAATATAACCATAAGTATGATTTGTTTGTTCAAGAAGAAA
ATGTGGTCCTGGAGGGGATTTCCGGGTCCTCTGCGCAAGACTCACCGCCC
ACCACCTATCTACCCACCCACCCTCCCCTCCCTCCCTCCCTCCCACCCTC
CCCTTTTCTGCGCCTAGAAATCTTCCTCCGCGCCAAGGAATACCACGTGG
ATTTCGTCCTGCTCGGTGGGGACTTGTTTCACGACAATAAACCCTCGCGC
AAGACCATGCATTCGACGATAAGCATCCTCCGTCGCCATTGCCTCGGGGA
TGATCCCGTCTCTTTTCAAGTTATATCCGAGCCCCCGCCCCAGGGCGGGA
CGGAAGGCACGATGGACGGCATGAACAAAGTAGGGAACTTCGCGCACGTC
AATTATGAAGACCCGAATTACGCGGTGGGACTGCCAATTTTTTCGATTCA
TGGCAATCATGATGACCCCTCCAGGGACGGGAACACGGAGCCTTTGTCGG
CGATGGACTTGTTGAGTGTCACCAACCTGGTCAATTATTTCGGAAAGGCA
TCCGCTACTGACAATGTGGAGGTGAGCCCTCTGTTGTTGCGGAAGGGGGG
CACCCTGATGGCGTTGTACGGGCTGGGGAACATGAGGGATGAACGCTTGA
ATCGGATGTGGCAGAAAAAGAAGATCAGGTTCCTTAGGCACCGACCCACG
GGCAGGGACGAGGAGCAGAAGGATTTCTTCTCGCTTTTTGCATTGCACCA
GAACAGGGATACGGGAAGGGGACAGAAAAATTGTGTGCAGGAGAGCATGA
TTCCCGAGTGGATGGATCTGGTGGTGTGGGGGTACGTCAAGTGAGGGGGA
GGGAGGGAGGGAGGGAGGGAGGGAAAAGGAAAAGTGAATGAGTTTTCATT
TTCCTGTGGCCAAAACAACCAATTACATATTTCCTCCCTCCCTCCCCATC
CCTCCCCCTCCCTCCCCCCCCCCCCGCATCCAGACACGAACACGAATGCC
TCGTCCGCCCCACCCGTTCGCTTGCCGGTGGTTTCTTCATCTCCCAGCCC
GGGTCCTCTGTTGCCACCTCGCTGGTGGAAGGAGAGGCGACTCCGAAGCA
AGTCGGCGTCCTAGATGTGAGGGAAGGAAATTTTCGTCTCTTCCCCGTTC
TCCTCCGACAGGTATGGCCCTCTTCTCTCTGTGCTCCTCTGTCTTCTTCC
CTTCCTTCCTCTTCTTCAAGGACACAATTTTATTACACACCTCTCCCTCC
CGCCTTCGCATTTCTCAGGTCCGTCCCTTCATCCTGAAGGCAATCCGCCT
CTCGGCTATCGAGGGCCTGGATCCCAATCATCCCAAGGTCGAAGAACACG
TCACCCTCGTCCTCGAAAAGCAGGTGTGGGCGCTGATCGAGGAAGCGAGG
GAGGAGCACCCGCCCCCTGGCCCCCTTCCTGGACAGACCTTCTCTTTGCT
TCACCCAGAGCAGGTTCTCGTGCGGCTTAAGGTTGAATACACCGGATTTT
TTACGATCAACAATCAGCGGTTTGGGCAGCGATTCGTTGGACACGTGGCG
AACCCCTCCGACATTTTGTTGTTTCACAAGGCGCGGAGGCTGGGGGGGAG
GGAGGAGGAGGAGGAGGAGGAGGGAGGGGGGGGGGGGGAAGAGGAGGAAG
GGCGGGAGGGGGGGGGATGA back to topCoding sequence (CDS) from alignment at scaffold_1:1075364..1077383+ >mRNA_1612 ID=mRNA_1612|Name=jgi.p|Nanoce1779_2|522402|organism=Nannochloropsis oceanica|type=CDS|length=5988bp|location=Sequence derived from alignment at scaffold_1:1075364..1077383+ (Nannochloropsis oceanica) ATGGCTAAAGAACAAAGACATCCATTCTTTCTTCCCTCATCCCTTTTGTC ACATCTCAAAGTGCTCAAACTCCCCCCAAAACCCCAACCCCCCTGCTCTT TTTTCTTCCCCTTCCCGCACAGCGCCCCAAACGAGCTCCTCCTTGAGCCA CCTGACGAGAACACGCTCCGCATCATGATCGCAACCGACAACCACGTAGG CTTCCTGGAGCGGGACCCCGTCCGAGGTCCTGACTCGTTCGCGGCGTTGG AGGAAATCTTCCTCCGCGCCAAGGAATACCACGTGGATTTCGTCCTGCTC GGTGGGGACTTGTTTCACGACAATAAACCCTCGCGCAAGACCATGCATTC GACGATAAGCATCCTCCGTCGCCATTGCCTCGGGGATGATCCCGTCTCTT TTCAAGTTATATCCGAGCCCCCGCCCCAGGGCGGGACGGAAGGCACGATG GACGGCATGAACAAAGTAGGGAACTTCGCGCACGTCAATTATGAAGACCC GAATTACGCGGTGGGACTGCCAATTTTTTCGATTCATGGCAATCATGATG ACCCCTCCAGGGACGGGAACACGGAGCCTTTGTCGGCGATGGACTTGTTG AGTGTCACCAACCTGGTCAATTATTTCGGAAAGGCATCCGCTACTGACAA TGTGGAGGTGAGCCCTCTGTTGTTGCGGAAGGGGGGCACCCTGATGGCGT TGTACGGGCTGGGGAACATGAGGGATGAACGCTTGAATCGGATGTGGCAG AAAAAGAAGATCAGGTTCCTTAGGCACCGACCCACGGGCAGGGACGAGGA GCAGAAGGATTTCTTCTCGCTTTTTGCATTGCACCAGAACAGGGATACGG GAAGGGGACAGAAAAATTGTGTGCAGGAGAGCATGATTCCCGAGTGGATG GATCTGGTGGTGTGGGGACACGAACACGAATGCCTCGTCCGCCCCACCCG TTCGCTTGCCGGTGGTTTCTTCATCTCCCAGCCCGGGTCCTCTGTTGCCA CCTCGCTGGTGGAAGGAGAGGCGACTCCGAAGCAAGTCGGCGTCCTAGAT GTGAGGGAAGGAAATTTTCGTCTCTTCCCCGTTCTCCTCCGACAGGTCCG TCCCTTCATCCTGAAGGCAATCCGCCTCTCGGCTATCGAGGGCCTGGATC CCAATCATCCCAAGGTCGAAGAACACGTCACCCTCGTCCTCGAAAAGCAG GTGTGGGCGCTGATCGAGGAAGCGAGGGAGGAGCACCCGCCCCCTGGCCC CCTTCCTGGACAGACCTTCTCTTTGCTTCACCCAGAGCAGGTTCTCGTGC GGCTTAAGGTTGAATACACCGGATTTTTTACGATCAACAATCAGCGGTTT GGGCAGCGATTCGTTGGACACGTGGCGAACCCCTCCGACATTTTGTTGTT TCACAAGGCGCGGAGGCTGGGGGGGAGGGAGGAGGAGGAGGAGGAGGAGG GAGGGGGGGGGGGGGAAGAGGAGGAAGGGCGGGAGGGGGGGGGATGAATG GCTAAAGAACAAAGACATCCATTCTTTCTTCCCTCATCCCTTTTGTCACA TCTCAAAGTGCTCAAACTCCCCCCAAAACCCCAACCCCCCTGCTCTTTTT TCTTCCCCTTCCCGCACAGCGCCCCAAACGAGCTCCTCCTTGAGCCACCT GACGAGAACACGCTCCGCATCATGATCGCAACCGACAACCACGTAGGCTT CCTGGAGCGGGACCCCGTCCGAGGTCCTGACTCGTTCGCGGCGTTGGAGG AAATCTTCCTCCGCGCCAAGGAATACCACGTGGATTTCGTCCTGCTCGGT GGGGACTTGTTTCACGACAATAAACCCTCGCGCAAGACCATGCATTCGAC GATAAGCATCCTCCGTCGCCATTGCCTCGGGGATGATCCCGTCTCTTTTC AAGTTATATCCGAGCCCCCGCCCCAGGGCGGGACGGAAGGCACGATGGAC GGCATGAACAAAGTAGGGAACTTCGCGCACGTCAATTATGAAGACCCGAA TTACGCGGTGGGACTGCCAATTTTTTCGATTCATGGCAATCATGATGACC CCTCCAGGGACGGGAACACGGAGCCTTTGTCGGCGATGGACTTGTTGAGT GTCACCAACCTGGTCAATTATTTCGGAAAGGCATCCGCTACTGACAATGT GGAGGTGAGCCCTCTGTTGTTGCGGAAGGGGGGCACCCTGATGGCGTTGT ACGGGCTGGGGAACATGAGGGATGAACGCTTGAATCGGATGTGGCAGAAA AAGAAGATCAGGTTCCTTAGGCACCGACCCACGGGCAGGGACGAGGAGCA GAAGGATTTCTTCTCGCTTTTTGCATTGCACCAGAACAGGGATACGGGAA GGGGACAGAAAAATTGTGTGCAGGAGAGCATGATTCCCGAGTGGATGGAT CTGGTGGTGTGGGGACACGAACACGAATGCCTCGTCCGCCCCACCCGTTC GCTTGCCGGTGGTTTCTTCATCTCCCAGCCCGGGTCCTCTGTTGCCACCT CGCTGGTGGAAGGAGAGGCGACTCCGAAGCAAGTCGGCGTCCTAGATGTG AGGGAAGGAAATTTTCGTCTCTTCCCCGTTCTCCTCCGACAGGTCCGTCC CTTCATCCTGAAGGCAATCCGCCTCTCGGCTATCGAGGGCCTGGATCCCA ATCATCCCAAGGTCGAAGAACACGTCACCCTCGTCCTCGAAAAGCAGGTG TGGGCGCTGATCGAGGAAGCGAGGGAGGAGCACCCGCCCCCTGGCCCCCT TCCTGGACAGACCTTCTCTTTGCTTCACCCAGAGCAGGTTCTCGTGCGGC TTAAGGTTGAATACACCGGATTTTTTACGATCAACAATCAGCGGTTTGGG CAGCGATTCGTTGGACACGTGGCGAACCCCTCCGACATTTTGTTGTTTCA CAAGGCGCGGAGGCTGGGGGGGAGGGAGGAGGAGGAGGAGGAGGAGGGAG GGGGGGGGGGGGAAGAGGAGGAAGGGCGGGAGGGGGGGGGATGAATGGCT AAAGAACAAAGACATCCATTCTTTCTTCCCTCATCCCTTTTGTCACATCT CAAAGTGCTCAAACTCCCCCCAAAACCCCAACCCCCCTGCTCTTTTTTCT TCCCCTTCCCGCACAGCGCCCCAAACGAGCTCCTCCTTGAGCCACCTGAC GAGAACACGCTCCGCATCATGATCGCAACCGACAACCACGTAGGCTTCCT GGAGCGGGACCCCGTCCGAGGTCCTGACTCGTTCGCGGCGTTGGAGGAAA TCTTCCTCCGCGCCAAGGAATACCACGTGGATTTCGTCCTGCTCGGTGGG GACTTGTTTCACGACAATAAACCCTCGCGCAAGACCATGCATTCGACGAT AAGCATCCTCCGTCGCCATTGCCTCGGGGATGATCCCGTCTCTTTTCAAG TTATATCCGAGCCCCCGCCCCAGGGCGGGACGGAAGGCACGATGGACGGC ATGAACAAAGTAGGGAACTTCGCGCACGTCAATTATGAAGACCCGAATTA CGCGGTGGGACTGCCAATTTTTTCGATTCATGGCAATCATGATGACCCCT CCAGGGACGGGAACACGGAGCCTTTGTCGGCGATGGACTTGTTGAGTGTC ACCAACCTGGTCAATTATTTCGGAAAGGCATCCGCTACTGACAATGTGGA GGTGAGCCCTCTGTTGTTGCGGAAGGGGGGCACCCTGATGGCGTTGTACG GGCTGGGGAACATGAGGGATGAACGCTTGAATCGGATGTGGCAGAAAAAG AAGATCAGGTTCCTTAGGCACCGACCCACGGGCAGGGACGAGGAGCAGAA GGATTTCTTCTCGCTTTTTGCATTGCACCAGAACAGGGATACGGGAAGGG GACAGAAAAATTGTGTGCAGGAGAGCATGATTCCCGAGTGGATGGATCTG GTGGTGTGGGGACACGAACACGAATGCCTCGTCCGCCCCACCCGTTCGCT TGCCGGTGGTTTCTTCATCTCCCAGCCCGGGTCCTCTGTTGCCACCTCGC TGGTGGAAGGAGAGGCGACTCCGAAGCAAGTCGGCGTCCTAGATGTGAGG GAAGGAAATTTTCGTCTCTTCCCCGTTCTCCTCCGACAGGTCCGTCCCTT CATCCTGAAGGCAATCCGCCTCTCGGCTATCGAGGGCCTGGATCCCAATC ATCCCAAGGTCGAAGAACACGTCACCCTCGTCCTCGAAAAGCAGGTGTGG GCGCTGATCGAGGAAGCGAGGGAGGAGCACCCGCCCCCTGGCCCCCTTCC TGGACAGACCTTCTCTTTGCTTCACCCAGAGCAGGTTCTCGTGCGGCTTA AGGTTGAATACACCGGATTTTTTACGATCAACAATCAGCGGTTTGGGCAG CGATTCGTTGGACACGTGGCGAACCCCTCCGACATTTTGTTGTTTCACAA GGCGCGGAGGCTGGGGGGGAGGGAGGAGGAGGAGGAGGAGGAGGGAGGGG GGGGGGGGGAAGAGGAGGAAGGGCGGGAGGGGGGGGGATGAATGGCTAAA GAACAAAGACATCCATTCTTTCTTCCCTCATCCCTTTTGTCACATCTCAA AGTGCTCAAACTCCCCCCAAAACCCCAACCCCCCTGCTCTTTTTTCTTCC CCTTCCCGCACAGCGCCCCAAACGAGCTCCTCCTTGAGCCACCTGACGAG AACACGCTCCGCATCATGATCGCAACCGACAACCACGTAGGCTTCCTGGA GCGGGACCCCGTCCGAGGTCCTGACTCGTTCGCGGCGTTGGAGGAAATCT TCCTCCGCGCCAAGGAATACCACGTGGATTTCGTCCTGCTCGGTGGGGAC TTGTTTCACGACAATAAACCCTCGCGCAAGACCATGCATTCGACGATAAG CATCCTCCGTCGCCATTGCCTCGGGGATGATCCCGTCTCTTTTCAAGTTA TATCCGAGCCCCCGCCCCAGGGCGGGACGGAAGGCACGATGGACGGCATG AACAAAGTAGGGAACTTCGCGCACGTCAATTATGAAGACCCGAATTACGC GGTGGGACTGCCAATTTTTTCGATTCATGGCAATCATGATGACCCCTCCA GGGACGGGAACACGGAGCCTTTGTCGGCGATGGACTTGTTGAGTGTCACC AACCTGGTCAATTATTTCGGAAAGGCATCCGCTACTGACAATGTGGAGGT GAGCCCTCTGTTGTTGCGGAAGGGGGGCACCCTGATGGCGTTGTACGGGC TGGGGAACATGAGGGATGAACGCTTGAATCGGATGTGGCAGAAAAAGAAG ATCAGGTTCCTTAGGCACCGACCCACGGGCAGGGACGAGGAGCAGAAGGA TTTCTTCTCGCTTTTTGCATTGCACCAGAACAGGGATACGGGAAGGGGAC AGAAAAATTGTGTGCAGGAGAGCATGATTCCCGAGTGGATGGATCTGGTG GTGTGGGGACACGAACACGAATGCCTCGTCCGCCCCACCCGTTCGCTTGC CGGTGGTTTCTTCATCTCCCAGCCCGGGTCCTCTGTTGCCACCTCGCTGG TGGAAGGAGAGGCGACTCCGAAGCAAGTCGGCGTCCTAGATGTGAGGGAA GGAAATTTTCGTCTCTTCCCCGTTCTCCTCCGACAGGTCCGTCCCTTCAT CCTGAAGGCAATCCGCCTCTCGGCTATCGAGGGCCTGGATCCCAATCATC CCAAGGTCGAAGAACACGTCACCCTCGTCCTCGAAAAGCAGGTGTGGGCG CTGATCGAGGAAGCGAGGGAGGAGCACCCGCCCCCTGGCCCCCTTCCTGG ACAGACCTTCTCTTTGCTTCACCCAGAGCAGGTTCTCGTGCGGCTTAAGG TTGAATACACCGGATTTTTTACGATCAACAATCAGCGGTTTGGGCAGCGA TTCGTTGGACACGTGGCGAACCCCTCCGACATTTTGTTGTTTCACAAGGC GCGGAGGCTGGGGGGGAGGGAGGAGGAGGAGGAGGAGGAGGGAGGGGGGG GGGGGGAAGAGGAGGAAGGGCGGGAGGGGGGGGGATGA back to top
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