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Properties
| Property Name | Value |
|---|
| TranscriptId | 572947 |
| Track | FilteredModels2 |
| ProteinId | 572861 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:1057402..1059407 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1605 ID=mRNA_1605|Name=jgi.p|Nanoce1779_2|572861|organism=Nannochloropsis oceanica|type=mRNA|length=1551bp
ACAGGTCAAGGCATGGGATCACCACCCCCATTGCCGCAGCACGAGCTAAG
TGACTATGACCATGGCAGCGCACAATTCGACGAGATCTTAAAGAGCATCC
CGCCCGTGGACTTTTGCTTTGCCTACGGTAGCGGCGTCTTTGATCAGCAT
GGCTACCACGACGACGACCACAACTACTCGACCGTGGCGCACAAGCAGGC
TACGACGAGCCGCGGCGACCCAATAATATTGCCAAAGTCTCCATCAGAAC
GCGAGAGGGACCCGGCGCGGCAGCCGATGCTGGATTTAGTGCTGGCCGTG
CGCAACCCTATTGAATGGCACCGGGAGAACCTCGCCCGGAACTGGAAACA
TTATTCTGTCTTGCGCTACCTGGGTGCGGAGCGGCTGGGGCAGATTGAAG
AGGACCATGGTGCCGCAATGTACTACAACACAGCCATCCCGGTCCCCGGA
CAGCCGGGCCGAGTTATGAAATATGGTATTATCAGCATGCATGCTCTCCG
TGAAGATCTATTGGACTGGCGATGGATGTACGCGGCAGGACGGCTGCAAA
AGCCAGTCCGAGTCATCAAGGCCTCCAACGCACTTACCGAGGCCCACCAA
GCTAACCTCGCCAGTGCCACCCGTGCCGCCCTCCTCCTACTTCCCGAAAC
CTTCTCCGATTTCGATCTCTTCACCATGATAGCTGGCCTCTCCTACCGAG
GCGACTTTCGCATGACCTTCGGCGAAAACCCACAAAAAGTCAAAAATATT
GTCACTGCCAATTTACCCCATTTCCACCGCCTCTACACACCTCACGTCCT
TTCGGCTGTCCCGTCTCTCATGGCCACTACTTCTGACCGCACTCGTTTTA
CCCAAGACTTGAGCCAGTCGACCCGTGCGGGCCTGCTAGGCCAGCTTCCA
TCGGCGGTACGACAGCATTTGGTACCGCCGAGCATGCGGGGAAGCGGTGG
AAGTGTCCTGATACCTGCAGTGCCAGCAGGAAGGGTACCTGCAGCAGGTG
AGGTCGAGTCGGCGCTGCGGACGGCATGGGAGGGGCTGCCTGTCAAAACG
ACGGCCAAGATGGTGAAACTGGGCATTCACAAGGTCGTGGCACGGTCGAG
TTTGACGCAAGGAATCAAGGGCATATTTACGGCGGGTGTGTGGAAGGCGC
TCGTGTACGGCTTAAGTAAGGTAAACAAATACCGAGTGGGGATGGGAAAA
TTGGAGGCGGCAGGCAAAATGTGAAGAAATACCAAGTGGGGATGGGAAAA
ATGGGAGCGGCAGGGGAAATGTGGTTTGGGTCTCGATCGGTGTACATAGC
GTGGTAATAATGTTTCAATACACAAACGCAAAGCAATCGATTTAAGTAAT
AAATAGAATGAAGTTCCGTGCATTCTTTTTTGTTTTCATTCAATGATTGT
CTTTACAAAGCGATGACGTCATGGAGGCTCCTCATAAATCCAGCATGAGA
CGAGTACATGAACCTCGCGAAAAAGAACGTCCACGAACATAATGCTGGGA
TATTCTACAAGGTACAGCATTTTTCAAAAAATATATTGGAATTTTGCAAT
G back to topprotein sequence of jgi.p|Nanoce1779_2|572861 >mRNA_1605-protein ID=mRNA_1605-protein|Name=jgi.p|Nanoce1779_2|572861|organism=Nannochloropsis oceanica|type=polypeptide|length=404bp
MGSPPPLPQHELSDYDHGSAQFDEILKSIPPVDFCFAYGSGVFDQHGYHD
DDHNYSTVAHKQATTSRGDPIILPKSPSERERDPARQPMLDLVLAVRNPI
EWHRENLARNWKHYSVLRYLGAERLGQIEEDHGAAMYYNTAIPVPGQPGR
VMKYGIISMHALREDLLDWRWMYAAGRLQKPVRVIKASNALTEAHQANLA
SATRAALLLLPETFSDFDLFTMIAGLSYRGDFRMTFGENPQKVKNIVTAN
LPHFHRLYTPHVLSAVPSLMATTSDRTRFTQDLSQSTRAGLLGQLPSAVR
QHLVPPSMRGSGGSVLIPAVPAGRVPAAGEVESALRTAWEGLPVKTTAKM
VKLGIHKVVARSSLTQGIKGIFTAGVWKALVYGLSKVNKYRVGMGKLEAA
GKM* back to topmRNA from alignment at scaffold_1:1057402..1059407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1605 ID=mRNA_1605|Name=jgi.p|Nanoce1779_2|572861|organism=Nannochloropsis oceanica|type=mRNA|length=2006bp|location=Sequence derived from alignment at scaffold_1:1057402..1059407- (Nannochloropsis oceanica)
ACAGGTCAAGGCATGGGATCACCACCCCCATTGCCGCAGCACGAGCTAAG
TGACTATGACCATGGCAGCGCACAATTCGACGAGATCTTAAAGAGCATCC
CGCCCGTGGACTTTTGCTTTGCCTACGGTAGCGGCGTCTTTGATCAGCAT
GGCTACCACGACGACGACCACAACTACTCGACCGTGGCGCACAAGCAGGC
TACGACGAGCCGCGGCGACCCAATAATATTGCCAAAGTCTCCATCAGAAC
GCGAGAGGGACCCGGCGCGGCAGCCGATGCTGGATTTAGTGCTGGCCGTG
CGCAACCCTATTGAATGGCACCGGGAGAACCTCGCCCGGAACTGGAAACA
TTATTCTGTCTTGCGCTACCTGGGTGCGGAGCGGCTGGGGCAGATTGAAG
GTAAGAATATGCCTTGATGTTGAGAGATCGGGGTGATTATATATATAATG
CTTGAGTGGTGAATACTACTACGTTCCAATCTTCTTTGTGTTTGGAGGGA
AAACAATCGAACAAGAAGAAATCCTTTACATGGACGGTAAGGGAATGAGC
GCTAGCGATCAAGCCCGAGCAAATACACACAAGCTCATGATCTATACTTC
AGCGACGATGTTGGACAAATAGAAAAAATGGCCGGAATCATCTCACCTTT
CTCGACTTGTCCAACTGCCCCAACCACAGAGGACCATGGTGCCGCAATGT
ACTACAACACAGCCATCCCGGTCCCCGGACAGCCGGGCCGAGTTATGAAA
TATGGTATTATCAGCATGCATGCTCTCCGTGAAGATCTATTGGACTGGCG
ATGGATGTACGCGGCAGGTACGTGAATGAAGTATTGAGTAGAGGGGGGTT
GATTCATTAGAGGAAGACTTGCCATGAAATTTGACAGGGGGGATGCGCCT
GCTAGCCTGACATTGAAGGGATTTGATATCAAAGGGATGTGCGTTGAGTC
ACACCTCTTCGTTATTTCTTCCTCTCTTTCATTCTATTTGCAGGACGGCT
GCAAAAGCCAGTCCGAGTCATCAAGGCCTCCAACGCACTTACCGAGGCCC
ACCAAGCTAACCTCGCCAGTGCCACCCGTGCCGCCCTCCTCCTACTTCCC
GAAACCTTCTCCGATTTCGATCTCTTCACCATGATAGCTGGCCTCTCCTA
CCGAGGCGACTTTCGCATGACCTTCGGCGAAAACCCACAAAAAGTCAAAA
ATATTGTCACTGCCAATTTACCCCATTTCCACCGCCTCTACACACCTCAC
GTCCTTTCGGCTGTCCCGTCTCTCATGGCCACTACTTCTGACCGCACTCG
TTTTACCCAAGACTTGAGCCAGTCGACCCGTGCGGGCCTGCTAGGCCAGC
TTCCATCGGCGGTACGACAGCATTTGGTACCGCCGAGCATGCGGGGAAGC
GGTGGAAGTGTCCTGATACCTGCAGTGCCAGCAGGAAGGGTACCTGCAGC
AGGTGAGGTCGAGTCGGCGCTGCGGACGGCATGGGAGGGGCTGCCTGTCA
AAACGACGGCCAAGATGGTGAAACTGGGCATTCACAAGGTCGTGGCACGG
TCGAGTTTGACGCAAGGAATCAAGGGCATATTTACGGCGGGTGTGTGGAA
GGCGCTCGTGTACGGCTTAAGTAAGGTAAACAAATACCGAGTGGGGATGG
GAAAATTGGAGGCGGCAGGCAAAATGTGAAGAAATACCAAGTGGGGATGG
GAAAAATGGGAGCGGCAGGGGAAATGTGGTTTGGGTCTCGATCGGTGTAC
ATAGCGTGGTAATAATGTTTCAATACACAAACGCAAAGCAATCGATTTAA
GTAATAAATAGAATGAAGTTCCGTGCATTCTTTTTTGTTTTCATTCAATG
ATTGTCTTTACAAAGCGATGACGTCATGGAGGCTCCTCATAAATCCAGCA
TGAGACGAGTACATGAACCTCGCGAAAAAGAACGTCCACGAACATAATGC
TGGGATATTCTACAAGGTACAGCATTTTTCAAAAAATATATTGGAATTTT
GCAATG back to topCoding sequence (CDS) from alignment at scaffold_1:1057402..1059407- >mRNA_1605 ID=mRNA_1605|Name=jgi.p|Nanoce1779_2|572861|organism=Nannochloropsis oceanica|type=CDS|length=3636bp|location=Sequence derived from alignment at scaffold_1:1057402..1059407- (Nannochloropsis oceanica)
GACGGCTGCAAAAGCCAGTCCGAGTCATCAAGGCCTCCAACGCACTTACC
GAGGCCCACCAAGCTAACCTCGCCAGTGCCACCCGTGCCGCCCTCCTCCT
ACTTCCCGAAACCTTCTCCGATTTCGATCTCTTCACCATGATAGCTGGCC
TCTCCTACCGAGGCGACTTTCGCATGACCTTCGGCGAAAACCCACAAAAA
GTCAAAAATATTGTCACTGCCAATTTACCCCATTTCCACCGCCTCTACAC
ACCTCACGTCCTTTCGGCTGTCCCGTCTCTCATGGCCACTACTTCTGACC
GCACTCGTTTTACCCAAGACTTGAGCCAGTCGACCCGTGCGGGCCTGCTA
GGCCAGCTTCCATCGGCGGTACGACAGCATTTGGTACCGCCGAGCATGCG
GGGAAGCGGTGGAAGTGTCCTGATACCTGCAGTGCCAGCAGGAAGGGTAC
CTGCAGCAGGTGAGGTCGAGTCGGCGCTGCGGACGGCATGGGAGGGGCTG
CCTGTCAAAACGACGGCCAAGATGGTGAAACTGGGCATTCACAAGGTCGT
GGCACGGTCGAGTTTGACGCAAGGAATCAAGGGCATATTTACGGCGGGTG
TGTGGAAGGCGCTCGTGTACGGCTTAAGTAAGGTAAACAAATACCGAGTG
GGGATGGGAAAATTGGAGGCGGCAGGCAAAATGTGAAGGACCATGGTGCC
GCAATGTACTACAACACAGCCATCCCGGTCCCCGGACAGCCGGGCCGAGT
TATGAAATATGGTATTATCAGCATGCATGCTCTCCGTGAAGATCTATTGG
ACTGGCGATGGATGTACGCGGCAGATGGGATCACCACCCCCATTGCCGCA
GCACGAGCTAAGTGACTATGACCATGGCAGCGCACAATTCGACGAGATCT
TAAAGAGCATCCCGCCCGTGGACTTTTGCTTTGCCTACGGTAGCGGCGTC
TTTGATCAGCATGGCTACCACGACGACGACCACAACTACTCGACCGTGGC
GCACAAGCAGGCTACGACGAGCCGCGGCGACCCAATAATATTGCCAAAGT
CTCCATCAGAACGCGAGAGGGACCCGGCGCGGCAGCCGATGCTGGATTTA
GTGCTGGCCGTGCGCAACCCTATTGAATGGCACCGGGAGAACCTCGCCCG
GAACTGGAAACATTATTCTGTCTTGCGCTACCTGGGTGCGGAGCGGCTGG
GGCAGATTGAAGGACGGCTGCAAAAGCCAGTCCGAGTCATCAAGGCCTCC
AACGCACTTACCGAGGCCCACCAAGCTAACCTCGCCAGTGCCACCCGTGC
CGCCCTCCTCCTACTTCCCGAAACCTTCTCCGATTTCGATCTCTTCACCA
TGATAGCTGGCCTCTCCTACCGAGGCGACTTTCGCATGACCTTCGGCGAA
AACCCACAAAAAGTCAAAAATATTGTCACTGCCAATTTACCCCATTTCCA
CCGCCTCTACACACCTCACGTCCTTTCGGCTGTCCCGTCTCTCATGGCCA
CTACTTCTGACCGCACTCGTTTTACCCAAGACTTGAGCCAGTCGACCCGT
GCGGGCCTGCTAGGCCAGCTTCCATCGGCGGTACGACAGCATTTGGTACC
GCCGAGCATGCGGGGAAGCGGTGGAAGTGTCCTGATACCTGCAGTGCCAG
CAGGAAGGGTACCTGCAGCAGGTGAGGTCGAGTCGGCGCTGCGGACGGCA
TGGGAGGGGCTGCCTGTCAAAACGACGGCCAAGATGGTGAAACTGGGCAT
TCACAAGGTCGTGGCACGGTCGAGTTTGACGCAAGGAATCAAGGGCATAT
TTACGGCGGGTGTGTGGAAGGCGCTCGTGTACGGCTTAAGTAAGGTAAAC
AAATACCGAGTGGGGATGGGAAAATTGGAGGCGGCAGGCAAAATGTGAAG
GACCATGGTGCCGCAATGTACTACAACACAGCCATCCCGGTCCCCGGACA
GCCGGGCCGAGTTATGAAATATGGTATTATCAGCATGCATGCTCTCCGTG
AAGATCTATTGGACTGGCGATGGATGTACGCGGCAGATGGGATCACCACC
CCCATTGCCGCAGCACGAGCTAAGTGACTATGACCATGGCAGCGCACAAT
TCGACGAGATCTTAAAGAGCATCCCGCCCGTGGACTTTTGCTTTGCCTAC
GGTAGCGGCGTCTTTGATCAGCATGGCTACCACGACGACGACCACAACTA
CTCGACCGTGGCGCACAAGCAGGCTACGACGAGCCGCGGCGACCCAATAA
TATTGCCAAAGTCTCCATCAGAACGCGAGAGGGACCCGGCGCGGCAGCCG
ATGCTGGATTTAGTGCTGGCCGTGCGCAACCCTATTGAATGGCACCGGGA
GAACCTCGCCCGGAACTGGAAACATTATTCTGTCTTGCGCTACCTGGGTG
CGGAGCGGCTGGGGCAGATTGAAGGACGGCTGCAAAAGCCAGTCCGAGTC
ATCAAGGCCTCCAACGCACTTACCGAGGCCCACCAAGCTAACCTCGCCAG
TGCCACCCGTGCCGCCCTCCTCCTACTTCCCGAAACCTTCTCCGATTTCG
ATCTCTTCACCATGATAGCTGGCCTCTCCTACCGAGGCGACTTTCGCATG
ACCTTCGGCGAAAACCCACAAAAAGTCAAAAATATTGTCACTGCCAATTT
ACCCCATTTCCACCGCCTCTACACACCTCACGTCCTTTCGGCTGTCCCGT
CTCTCATGGCCACTACTTCTGACCGCACTCGTTTTACCCAAGACTTGAGC
CAGTCGACCCGTGCGGGCCTGCTAGGCCAGCTTCCATCGGCGGTACGACA
GCATTTGGTACCGCCGAGCATGCGGGGAAGCGGTGGAAGTGTCCTGATAC
CTGCAGTGCCAGCAGGAAGGGTACCTGCAGCAGGTGAGGTCGAGTCGGCG
CTGCGGACGGCATGGGAGGGGCTGCCTGTCAAAACGACGGCCAAGATGGT
GAAACTGGGCATTCACAAGGTCGTGGCACGGTCGAGTTTGACGCAAGGAA
TCAAGGGCATATTTACGGCGGGTGTGTGGAAGGCGCTCGTGTACGGCTTA
AGTAAGGTAAACAAATACCGAGTGGGGATGGGAAAATTGGAGGCGGCAGG
CAAAATGTGAAGGACCATGGTGCCGCAATGTACTACAACACAGCCATCCC
GGTCCCCGGACAGCCGGGCCGAGTTATGAAATATGGTATTATCAGCATGC
ATGCTCTCCGTGAAGATCTATTGGACTGGCGATGGATGTACGCGGCAGAT
GGGATCACCACCCCCATTGCCGCAGCACGAGCTAAGTGACTATGACCATG
GCAGCGCACAATTCGACGAGATCTTAAAGAGCATCCCGCCCGTGGACTTT
TGCTTTGCCTACGGTAGCGGCGTCTTTGATCAGCATGGCTACCACGACGA
CGACCACAACTACTCGACCGTGGCGCACAAGCAGGCTACGACGAGCCGCG
GCGACCCAATAATATTGCCAAAGTCTCCATCAGAACGCGAGAGGGACCCG
GCGCGGCAGCCGATGCTGGATTTAGTGCTGGCCGTGCGCAACCCTATTGA
ATGGCACCGGGAGAACCTCGCCCGGAACTGGAAACATTATTCTGTCTTGC
GCTACCTGGGTGCGGAGCGGCTGGGGCAGATTGAAG back to top
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