|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 572609 |
| Track | FilteredModels2 |
| ProteinId | 572523 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:859964..861211 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1526 ID=mRNA_1526|Name=jgi.p|Nanoce1779_2|572523|organism=Nannochloropsis oceanica|type=mRNA|length=895bp
CAGCATCGTTAAGGGTGCTAGATCACACTAGGAGAGCAGGAGGAATGAGC
TGCCGGGGTGAGCACATTGATTCCTGTGGGCACGGCCACGACCACGGTCA
CGGAGAAGAATGCGACCATGAGGCCGAGGACCCCGATGGGCAGTCCATGT
ATTCAGCTATTGATACGAGCAAGGTCCGCTGTTTAAACGAGAGTGAGTTC
GGTGCGTGCCTGCATCCTTTCAAGCCCTACAGTCGACGCCGGGAGGCCGA
ACCCTGCCTAGACAGCCACGACGACGACCCGGAGCTACTGCTCTTTGTGC
CGTTTACCCGCGTTGTCAAACTCAAGAGCATCAATATAATTGGGGGCCAT
GCAGGTGAGGGCACAGCACCGACCAAGATCAAACTCTTCATGAATCGAGA
CGACATCGATTTCAGCAACTGTGGGGAGCTACCTGCGGCACAAGAATTGG
AGCTGGTAGCGAACGCGGCCTCTATGGGAGATGGGGGTGGAATCGATTAT
CCTTTAAAAGTGAGCAAGTTTCAGAATGTTGACAGCTTGACCATTTTCTT
TAGTGAAAATGAGGGGAGTGATGTGACGTCGGTGTCGTATGTGGGGTTTA
AAGGCGAGGTGACGACGGCGCGGCATGGGGTGGTGGAATGTGTATACGAG
TCGGCGCCTCAGGCGGCGGATCACAAGCAGGATGCGGGGGAATTTTTATT
GCCGGATGTGTCAGGAAATTAAGATGATAAAAAACAGTAAAACGAGACGG
CTGGAAGCGCAAAAAAATGACATGTCGTACTTGTAGATACATCAAAATGG
AGCTAAACGAAAAGAAAGAGACGAAGAGGGTGCGGAGACAAAGAGAGTGT
GCATGTATGAGTGTGTGTGGATGAGCGGGTTTTACTCCACGCCTT back to topprotein sequence of jgi.p|Nanoce1779_2|572523 >mRNA_1526-protein ID=mRNA_1526-protein|Name=jgi.p|Nanoce1779_2|572523|organism=Nannochloropsis oceanica|type=polypeptide|length=226bp
MSCRGEHIDSCGHGHDHGHGEECDHEAEDPDGQSMYSAIDTSKVRCLNES
EFGACLHPFKPYSRRREAEPCLDSHDDDPELLLFVPFTRVVKLKSINIIG
GHAGEGTAPTKIKLFMNRDDIDFSNCGELPAAQELELVANAASMGDGGGI
DYPLKVSKFQNVDSLTIFFSENEGSDVTSVSYVGFKGEVTTARHGVVECV
YESAPQAADHKQDAGEFLLPDVSGN* back to topmRNA from alignment at scaffold_1:859964..861211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1526 ID=mRNA_1526|Name=jgi.p|Nanoce1779_2|572523|organism=Nannochloropsis oceanica|type=mRNA|length=1248bp|location=Sequence derived from alignment at scaffold_1:859964..861211- (Nannochloropsis oceanica)
CAGCATCGTTAAGGGTGCTAGATCACACTAGGAGAGCAGGAGGAATGAGC
TGCCGGGGTGAGCACATTGATTCCTGTGGGCACGGCCACGACCACGGTCA
CGGAGAAGAATGGTGAGCGAGCGCTGGAAGTATCATGACTTAGCGTCGAG
AAGGACATAAGTGGTGGTAGAGTGCTTGTTTGCAGCGTGCGGAGTAGGGA
TTTTGTGTATACTTGTTTCTATCAGTGGCATCGTGCGTCTCTTTAGGGAA
GAGCCGCGGTCAGCCTCCTCCTTTGCCTCCTCTCTCTCCCCTTCACCAAT
CTTACACTCCTCATTCATTCGTTCCTGTAACACAGCGACCATGAGGCCGA
GGACCCCGATGGGCAGTCCATGTATTCAGCTATTGATACGAGCAAGGTCC
GCTGTTTAAACGAGAGTGAGTTCGGTGCGTGCCTGCATCCTTTCAAGCCC
TACAGTCGACGCCGGGAGGCCGAACCCTGCCTAGACAGCCACGACGACGA
CCCGGAGCTACTGCTCTTTGTGCCGTTTACCCGCGTTGTCAAACTCAAGA
GCATCAATATAATTGGGGGCCATGCAGGTGAGGGCACAGCACCGACCAAG
ATCAAACTGTAAGTAGGAAGGGTTGAGTTTTTTAATGCGGACCTCTGATG
TTGTAGCGCTTCTTCCTTTTCTCGTTCTCTCCCTACTTCTCTTATTCCCA
TGCCATTCCTTTGTCTACCCCATTTTAACTCCTCTTAGCTTCATGAATCG
AGACGACATCGATTTCAGCAACTGTGGGGAGCTACCTGCGGCACAAGAAT
TGGAGCTGGTAGCGAACGCGGCCTCTATGGGAGATGGGGGTGGAATCGAT
TATCCTTTAAAAGTGAGCAAGTTTCAGAATGTTGACAGCTTGACCATTTT
CTTTAGTGAAAATGAGGGGAGTGATGTGACGTCGGTGTCGTATGTGGGGT
TTAAAGGCGAGGTGACGACGGCGCGGCATGGGGTGGTGGAATGTGTATAC
GAGTCGGCGCCTCAGGCGGCGGATCACAAGCAGGATGCGGGGGAATTTTT
ATTGCCGGATGTGTCAGGAAATTAAGATGATAAAAAACAGTAAAACGAGA
CGGCTGGAAGCGCAAAAAAATGACATGTCGTACTTGTAGATACATCAAAA
TGGAGCTAAACGAAAAGAAAGAGACGAAGAGGGTGCGGAGACAAAGAGAG
TGTGCATGTATGAGTGTGTGTGGATGAGCGGGTTTTACTCCACGCCTT back to topCoding sequence (CDS) from alignment at scaffold_1:859964..861211- >mRNA_1526 ID=mRNA_1526|Name=jgi.p|Nanoce1779_2|572523|organism=Nannochloropsis oceanica|type=CDS|length=2034bp|location=Sequence derived from alignment at scaffold_1:859964..861211- (Nannochloropsis oceanica)
CTTCATGAATCGAGACGACATCGATTTCAGCAACTGTGGGGAGCTACCTG
CGGCACAAGAATTGGAGCTGGTAGCGAACGCGGCCTCTATGGGAGATGGG
GGTGGAATCGATTATCCTTTAAAAGTGAGCAAGTTTCAGAATGTTGACAG
CTTGACCATTTTCTTTAGTGAAAATGAGGGGAGTGATGTGACGTCGGTGT
CGTATGTGGGGTTTAAAGGCGAGGTGACGACGGCGCGGCATGGGGTGGTG
GAATGTGTATACGAGTCGGCGCCTCAGGCGGCGGATCACAAGCAGGATGC
GGGGGAATTTTTATTGCCGGATGTGTCAGGAAATTAACGACCATGAGGCC
GAGGACCCCGATGGGCAGTCCATGTATTCAGCTATTGATACGAGCAAGGT
CCGCTGTTTAAACGAGAGTGAGTTCGGTGCGTGCCTGCATCCTTTCAAGC
CCTACAGTCGACGCCGGGAGGCCGAACCCTGCCTAGACAGCCACGACGAC
GACCCGGAGCTACTGCTCTTTGTGCCGTTTACCCGCGTTGTCAAACTCAA
GAGCATCAATATAATTGGGGGCCATGCAGGTGAGGGCACAGCACCGACCA
AGATCAAACTATGAGCTGCCGGGGTGAGCACATTGATTCCTGTGGGCACG
GCCACGACCACGGTCACGGAGAAGAATGCTTCATGAATCGAGACGACATC
GATTTCAGCAACTGTGGGGAGCTACCTGCGGCACAAGAATTGGAGCTGGT
AGCGAACGCGGCCTCTATGGGAGATGGGGGTGGAATCGATTATCCTTTAA
AAGTGAGCAAGTTTCAGAATGTTGACAGCTTGACCATTTTCTTTAGTGAA
AATGAGGGGAGTGATGTGACGTCGGTGTCGTATGTGGGGTTTAAAGGCGA
GGTGACGACGGCGCGGCATGGGGTGGTGGAATGTGTATACGAGTCGGCGC
CTCAGGCGGCGGATCACAAGCAGGATGCGGGGGAATTTTTATTGCCGGAT
GTGTCAGGAAATTAACGACCATGAGGCCGAGGACCCCGATGGGCAGTCCA
TGTATTCAGCTATTGATACGAGCAAGGTCCGCTGTTTAAACGAGAGTGAG
TTCGGTGCGTGCCTGCATCCTTTCAAGCCCTACAGTCGACGCCGGGAGGC
CGAACCCTGCCTAGACAGCCACGACGACGACCCGGAGCTACTGCTCTTTG
TGCCGTTTACCCGCGTTGTCAAACTCAAGAGCATCAATATAATTGGGGGC
CATGCAGGTGAGGGCACAGCACCGACCAAGATCAAACTATGAGCTGCCGG
GGTGAGCACATTGATTCCTGTGGGCACGGCCACGACCACGGTCACGGAGA
AGAATGCTTCATGAATCGAGACGACATCGATTTCAGCAACTGTGGGGAGC
TACCTGCGGCACAAGAATTGGAGCTGGTAGCGAACGCGGCCTCTATGGGA
GATGGGGGTGGAATCGATTATCCTTTAAAAGTGAGCAAGTTTCAGAATGT
TGACAGCTTGACCATTTTCTTTAGTGAAAATGAGGGGAGTGATGTGACGT
CGGTGTCGTATGTGGGGTTTAAAGGCGAGGTGACGACGGCGCGGCATGGG
GTGGTGGAATGTGTATACGAGTCGGCGCCTCAGGCGGCGGATCACAAGCA
GGATGCGGGGGAATTTTTATTGCCGGATGTGTCAGGAAATTAACGACCAT
GAGGCCGAGGACCCCGATGGGCAGTCCATGTATTCAGCTATTGATACGAG
CAAGGTCCGCTGTTTAAACGAGAGTGAGTTCGGTGCGTGCCTGCATCCTT
TCAAGCCCTACAGTCGACGCCGGGAGGCCGAACCCTGCCTAGACAGCCAC
GACGACGACCCGGAGCTACTGCTCTTTGTGCCGTTTACCCGCGTTGTCAA
ACTCAAGAGCATCAATATAATTGGGGGCCATGCAGGTGAGGGCACAGCAC
CGACCAAGATCAAACTATGAGCTGCCGGGGTGAGCACATTGATTCCTGTG
GGCACGGCCACGACCACGGTCACGGAGAAGAATG back to top
|