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Properties
| Property Name | Value |
| TranscriptId | 667518 |
| Track | FilteredModels2 |
| ProteinId | 667432 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_1 | supercontig | scaffold_1:800461..802654 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1506 ID=mRNA_1506|Name=jgi.p|Nanoce1779_2|667432|organism=Nannochloropsis oceanica|type=mRNA|length=1270bp AAACGATTGAAAGACTCTTCCACTTGGAAATCAAAAACAATTCCAAAAAG GCAAGCAGCCCTCAACAGTCCATCCCCCCCTTGCCACTTCATCAGCCATG GAAGAAGCCGGCGAGGAGGAAGAGGGCGTACTATACGTCCACTGCAATCG GTGCCAGCAGAGCCTCTCCTCCTTCTACAAATCCTCTTGTGGGCACTGCT TTTGCGTGGACTGTGCCACCACTCATTTCGCTAAAGACCCCTGCTGCCCC GTCTGTGGCCTTCGCCTCTCCCAAAAGCACTTCCGGGGACCCTTCGACGT AGGCATCTCTGCAGGCGAGCCCGTGGAAGCGGCCATGTACAAGAACGTCT TCACTTCCAATCGATTGGATGAGGTTCTGCAAAAGGCCTTATTGTGCTTA CCAGCGGTCGAAGACGTCATCAACCTCGTTACCACCCAGTTGTACCTGGA GAATCAACGCAGTCAGATCCTGCGGGAGAAGGTGGAGCGGAAGCTCAGGA AGGCACGGGGGGATCTGAAGCTCACGGTGCAGGAGGCCAGGAGTAAGATT GCCATCCTTTCCTCCCAGCTTACAGAGGCAGAGGCTTGGAAACGCAAACT TAATGACGAGCTATCCACGGCCAAGCAGGAGGTGTATGAGGTCCACCGCA AGAATAAGTCCATGGAGCAGATGCTTGCACGTCTTCGCAACGACGGCCAC GCCATCCCTGCCGCCCTTCCACTCCCCAGCCCGGCCTCGACACCTCCCCA TCAATACCAACACCTCCGCCAGCAACCGCAGCGATCGCAGCAGCAGCAGC AGCAGTACTACCCCCCTCCTTCCCCACGTATCAGCGCCAGCAGCAGCAAG TCCCCCAGTGGGCTCCAATTCCCGCAGCAGCAGCTGCTGCATCGTCCCGC CTCCGCCGCCCGCACTATCTCCCCTCACCACCCAGGAGAAGGAGGCGGAG GAGGAGGAGATGGAGGGAGGGGGTTCCAAAATTCTTTGGTTCAGCCTACC CCATCTCGGAGTATGAGTGCTGGCAGCAGCAACGGCAGCATTTCATTGTC TCGCTCTCTGTCGCCGCATCATTATCATCATCATCGTGGGGGGGGCTTGG CCGTCGGTGTAGGGGTGGGGGGGACGGGCGCTTGTTCACCCGCCGGGGGT CGTTCCTCCCACGCGTCCTCCTCCTCGCCTTTTGGAGGGAGATCTTTTGG CGCGAAGCAACAACACCGCGACCAACAGACTGACAGATCTGGCAGCAGCA GCAGCAGCCACAAAAATTAG back to topprotein sequence of jgi.p|Nanoce1779_2|667432 >mRNA_1506-protein ID=mRNA_1506-protein|Name=jgi.p|Nanoce1779_2|667432|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp MEEAGEEEEGVLYVHCNRCQQSLSSFYKSSCGHCFCVDCATTHFAKDPCC PVCGLRLSQKHFRGPFDVGISAGEPVEAAMYKNVFTSNRLDEVLQKALLC LPAVEDVINLVTTQLYLENQRSQILREKVERKLRKARGDLKLTVQEARSK IAILSSQLTEAEAWKRKLNDELSTAKQEVYEVHRKNKSMEQMLARLRNDG HAIPAALPLPSPASTPPHQYQHLRQQPQRSQQQQQQYYPPPSPRISASSS KSPSGLQFPQQQLLHRPASAARTISPHHPGEGGGGGGDGGRGFQNSLVQP TPSRSMSAGSSNGSISLSRSLSPHHYHHHRGGGLAVGVGVGGTGACSPAG GRSSHASSSSPFGGRSFGAKQQHRDQQTDRSGSSSSSHKN* back to topmRNA from alignment at scaffold_1:800461..802654+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1506 ID=mRNA_1506|Name=jgi.p|Nanoce1779_2|667432|organism=Nannochloropsis oceanica|type=mRNA|length=2194bp|location=Sequence derived from alignment at scaffold_1:800461..802654+ (Nannochloropsis oceanica) AAACGATTGAAAGACTCTTCCACTTGGAAATCAAAAACAATTCCAAAAAG
GTCGGAAGTGACTGGTAATGAAGTTTCATGCATATGCGTTTGCTTATGTC
GTTGTACGAGCTTTGAATTCGCTGGGCTATGTGTAGAGTGTCTGGGGTGG
TATTACTGGGGGGGTACGCCCAGCTATAGAGTGGGCCGCTCCAGTGCTTC
CTCCTCCTTCCCCCTCCTCTTCCTCCTCCTTCCCCTTCTCCTCCGCCTCC
TGTACCTCCTTCTGGACCTTTTTTACACGACACTACTACACAGGCAAGCA
GCCCTCAACAGTCCATCCCCCCCTTGCCACTTCATCAGCCATGGAAGAAG
CCGGCGAGGAGGAAGAGGGCGTACTATACGTCCACTGCAATCGGTGCCAG
CAGAGCCTCTCCTCCTTCTACAAATCCTCTTGTGGGCACTGCTTTTGCGT
GGACTGTGCCACCACTCATTTCGCTAAAGACCCCTGCTGCCCCGTCTGTG
GCCTTCGCCTCTCCCAAAAGCACTTCCGGGGACCCTTCGACGTAGGCATC
TCTGCAGGCGAGCCCGTGGAAGCGGCCATGTACAAGAACGTCTTCACTTC
CAATCGATTGGATGAGGTTCTGCAAAAGGCCTTATTGTGCTTACCAGCGG
TCGAAGACGTCATCAACCTCGTTACCACCCAGTTGTACCTGGAGAATCAA
CGCAGTCAGATCCTGCGGGAGAAGGTGGAGCGGAAGCTCAGGAAGGCACG
GGGGGATCTGAAGCTCACGGTGCAGGAGGCCAGGAGTAAGATTGCCATCC
TTTCCTCCCAGCTTACAGAGGCAGAGGCTTGGAAACGCAAACTTAGTACG
TAGAGGGAGGGGGGAAGGGATGGTGAGGAGCGAGGGAAGGCGATATTTGT
GTGTATGAGGAAGACGTAGGAAAGGTTCTTCATAACGAGTTTTCATTCAT
CCCTCTCTTCCTCCCTCCCCTCCTTCCTTCTTTCCTCGGCATAGATGACG
AGCTATCCACGGCCAAGCAGGAGGTGTATGAGGTCCACCGCAAGAATAAG
TCCATGGAGCAGGTAAGGGGGCGAGAAATTGGGAGAGAGAGACAAAGTTA
AATCCCGTGGGTGTCCTCATCTATGCTCCTCCTCGCTTGGCACCGCAATC
TCCTCCTCCTTCTCCTCCTCCTCCTTCTTCTCCTTTTTCCTTCTTTGCCT
CATCTCCTCCCTCCCCCCTCTCCTTCCCCCTTGCCTTGCCCAGATGCTTG
CACGTCTTCGCAACGACGGCCACGCCATCCCTGCCGCCCTTCCACTCCCC
AGCCCGGCCTCGACACCTCCCCATCAATACCAACACCTCCGCCAGCAACC
GCAGCGATCGCAGCAGCAGCAGCAGCAGTACTACCCCCCTCCTTCCCCAC
GTATCAGCGCCAGCAGCAGCAAGGTAAGTGGGGAAATGCACAGAGCAAAT
GTCATTCACTCCTCCCTCCTTCCCGCCACTTCTTCTCAATTCGCCCCTCC
CTCCCTCCTTTCCTACCTACCTACATCCTCACCTCAGTCCCCCAGTGGGC
TCCAATTCCCGCAGCAGCAGCTGCTGCATCGTCCCGCCTCCGCCGCCCGC
ACTATCTCCCCTCACCACCCAGGAGAAGGAGGCGGAGGAGGAGGAGATGG
AGGGAGGGGGTTCCAAAATTCTTTGGTTCAGCCTACCCCATCTCGGAGTA
TGAGTGCTGGCAGCAGCAACGGCAGCATTTCATTGTCTCGCTCTCTGTCG
CCGCATCATTATCATCATCATCGTGGGGGGGGCTTGGCCGTCGGTGTAGG
GGTGGGGGGGACGGGCGCTTGTTCACCCGCCGGGGGTCGTTCCTCCCACG
CGTCCTCCTCCTCGCCTTTTGGAGGGAGATCTTTTGGCGCGGTAAGTGAT
TACAGAGTGCCTTATTGAGGGAGGGAGAGACGGAGGGAGGAAGGGGAAAA
GAGAAGGAGGGAGGAATGCTTTCTTTTCTTGCTCCTCTCTGTAGGTACTC
CTCTTTGTAGAAGGTCTTCTTCCGTACTGGAGGGGAAGAAATGGAGAGAG
GGGGGGGGAAGGACGAGAGGGGGGGAGGGAGGGCGAGATGTACCCTCGTA
AGGCTGAGATTTACAACTACAACTACAGAAGCAACAACACCGCGACCAAC
AGACTGACAGATCTGGCAGCAGCAGCAGCAGCCACAAAAATTAG back to topCoding sequence (CDS) from alignment at scaffold_1:800461..802654+ >mRNA_1506 ID=mRNA_1506|Name=jgi.p|Nanoce1779_2|667432|organism=Nannochloropsis oceanica|type=CDS|length=5865bp|location=Sequence derived from alignment at scaffold_1:800461..802654+ (Nannochloropsis oceanica) ATGGAAGAAGCCGGCGAGGAGGAAGAGGGCGTACTATACGTCCACTGCAA TCGGTGCCAGCAGAGCCTCTCCTCCTTCTACAAATCCTCTTGTGGGCACT GCTTTTGCGTGGACTGTGCCACCACTCATTTCGCTAAAGACCCCTGCTGC CCCGTCTGTGGCCTTCGCCTCTCCCAAAAGCACTTCCGGGGACCCTTCGA CGTAGGCATCTCTGCAGGCGAGCCCGTGGAAGCGGCCATGTACAAGAACG TCTTCACTTCCAATCGATTGGATGAGGTTCTGCAAAAGGCCTTATTGTGC TTACCAGCGGTCGAAGACGTCATCAACCTCGTTACCACCCAGTTGTACCT GGAGAATCAACGCAGTCAGATCCTGCGGGAGAAGGTGGAGCGGAAGCTCA GGAAGGCACGGGGGGATCTGAAGCTCACGGTGCAGGAGGCCAGGAGTAAG ATTGCCATCCTTTCCTCCCAGCTTACAGAGGCAGAGGCTTGGAAACGCAA ACTTAATGACGAGCTATCCACGGCCAAGCAGGAGGTGTATGAGGTCCACC GCAAGAATAAGTCCATGGAGCAGATGCTTGCACGTCTTCGCAACGACGGC CACGCCATCCCTGCCGCCCTTCCACTCCCCAGCCCGGCCTCGACACCTCC CCATCAATACCAACACCTCCGCCAGCAACCGCAGCGATCGCAGCAGCAGC AGCAGCAGTACTACCCCCCTCCTTCCCCACGTATCAGCGCCAGCAGCAGC AAGTCCCCCAGTGGGCTCCAATTCCCGCAGCAGCAGCTGCTGCATCGTCC CGCCTCCGCCGCCCGCACTATCTCCCCTCACCACCCAGGAGAAGGAGGCG GAGGAGGAGGAGATGGAGGGAGGGGGTTCCAAAATTCTTTGGTTCAGCCT ACCCCATCTCGGAGTATGAGTGCTGGCAGCAGCAACGGCAGCATTTCATT GTCTCGCTCTCTGTCGCCGCATCATTATCATCATCATCGTGGGGGGGGCT TGGCCGTCGGTGTAGGGGTGGGGGGGACGGGCGCTTGTTCACCCGCCGGG GGTCGTTCCTCCCACGCGTCCTCCTCCTCGCCTTTTGGAGGGAGATCTTT TGGCGCGAAGCAACAACACCGCGACCAACAGACTGACAGATCTGGCAGCA GCAGCAGCAGCCACAAAAATTAGATGGAAGAAGCCGGCGAGGAGGAAGAG GGCGTACTATACGTCCACTGCAATCGGTGCCAGCAGAGCCTCTCCTCCTT CTACAAATCCTCTTGTGGGCACTGCTTTTGCGTGGACTGTGCCACCACTC ATTTCGCTAAAGACCCCTGCTGCCCCGTCTGTGGCCTTCGCCTCTCCCAA AAGCACTTCCGGGGACCCTTCGACGTAGGCATCTCTGCAGGCGAGCCCGT GGAAGCGGCCATGTACAAGAACGTCTTCACTTCCAATCGATTGGATGAGG TTCTGCAAAAGGCCTTATTGTGCTTACCAGCGGTCGAAGACGTCATCAAC CTCGTTACCACCCAGTTGTACCTGGAGAATCAACGCAGTCAGATCCTGCG GGAGAAGGTGGAGCGGAAGCTCAGGAAGGCACGGGGGGATCTGAAGCTCA CGGTGCAGGAGGCCAGGAGTAAGATTGCCATCCTTTCCTCCCAGCTTACA GAGGCAGAGGCTTGGAAACGCAAACTTAATGACGAGCTATCCACGGCCAA GCAGGAGGTGTATGAGGTCCACCGCAAGAATAAGTCCATGGAGCAGATGC TTGCACGTCTTCGCAACGACGGCCACGCCATCCCTGCCGCCCTTCCACTC CCCAGCCCGGCCTCGACACCTCCCCATCAATACCAACACCTCCGCCAGCA ACCGCAGCGATCGCAGCAGCAGCAGCAGCAGTACTACCCCCCTCCTTCCC CACGTATCAGCGCCAGCAGCAGCAAGTCCCCCAGTGGGCTCCAATTCCCG CAGCAGCAGCTGCTGCATCGTCCCGCCTCCGCCGCCCGCACTATCTCCCC TCACCACCCAGGAGAAGGAGGCGGAGGAGGAGGAGATGGAGGGAGGGGGT TCCAAAATTCTTTGGTTCAGCCTACCCCATCTCGGAGTATGAGTGCTGGC AGCAGCAACGGCAGCATTTCATTGTCTCGCTCTCTGTCGCCGCATCATTA TCATCATCATCGTGGGGGGGGCTTGGCCGTCGGTGTAGGGGTGGGGGGGA CGGGCGCTTGTTCACCCGCCGGGGGTCGTTCCTCCCACGCGTCCTCCTCC TCGCCTTTTGGAGGGAGATCTTTTGGCGCGAAGCAACAACACCGCGACCA ACAGACTGACAGATCTGGCAGCAGCAGCAGCAGCCACAAAAATTAGATGG AAGAAGCCGGCGAGGAGGAAGAGGGCGTACTATACGTCCACTGCAATCGG TGCCAGCAGAGCCTCTCCTCCTTCTACAAATCCTCTTGTGGGCACTGCTT TTGCGTGGACTGTGCCACCACTCATTTCGCTAAAGACCCCTGCTGCCCCG TCTGTGGCCTTCGCCTCTCCCAAAAGCACTTCCGGGGACCCTTCGACGTA GGCATCTCTGCAGGCGAGCCCGTGGAAGCGGCCATGTACAAGAACGTCTT CACTTCCAATCGATTGGATGAGGTTCTGCAAAAGGCCTTATTGTGCTTAC CAGCGGTCGAAGACGTCATCAACCTCGTTACCACCCAGTTGTACCTGGAG AATCAACGCAGTCAGATCCTGCGGGAGAAGGTGGAGCGGAAGCTCAGGAA GGCACGGGGGGATCTGAAGCTCACGGTGCAGGAGGCCAGGAGTAAGATTG CCATCCTTTCCTCCCAGCTTACAGAGGCAGAGGCTTGGAAACGCAAACTT AATGACGAGCTATCCACGGCCAAGCAGGAGGTGTATGAGGTCCACCGCAA GAATAAGTCCATGGAGCAGATGCTTGCACGTCTTCGCAACGACGGCCACG CCATCCCTGCCGCCCTTCCACTCCCCAGCCCGGCCTCGACACCTCCCCAT CAATACCAACACCTCCGCCAGCAACCGCAGCGATCGCAGCAGCAGCAGCA GCAGTACTACCCCCCTCCTTCCCCACGTATCAGCGCCAGCAGCAGCAAGT CCCCCAGTGGGCTCCAATTCCCGCAGCAGCAGCTGCTGCATCGTCCCGCC TCCGCCGCCCGCACTATCTCCCCTCACCACCCAGGAGAAGGAGGCGGAGG AGGAGGAGATGGAGGGAGGGGGTTCCAAAATTCTTTGGTTCAGCCTACCC CATCTCGGAGTATGAGTGCTGGCAGCAGCAACGGCAGCATTTCATTGTCT CGCTCTCTGTCGCCGCATCATTATCATCATCATCGTGGGGGGGGCTTGGC CGTCGGTGTAGGGGTGGGGGGGACGGGCGCTTGTTCACCCGCCGGGGGTC GTTCCTCCCACGCGTCCTCCTCCTCGCCTTTTGGAGGGAGATCTTTTGGC GCGAAGCAACAACACCGCGACCAACAGACTGACAGATCTGGCAGCAGCAG CAGCAGCCACAAAAATTAGATGGAAGAAGCCGGCGAGGAGGAAGAGGGCG TACTATACGTCCACTGCAATCGGTGCCAGCAGAGCCTCTCCTCCTTCTAC AAATCCTCTTGTGGGCACTGCTTTTGCGTGGACTGTGCCACCACTCATTT CGCTAAAGACCCCTGCTGCCCCGTCTGTGGCCTTCGCCTCTCCCAAAAGC ACTTCCGGGGACCCTTCGACGTAGGCATCTCTGCAGGCGAGCCCGTGGAA GCGGCCATGTACAAGAACGTCTTCACTTCCAATCGATTGGATGAGGTTCT GCAAAAGGCCTTATTGTGCTTACCAGCGGTCGAAGACGTCATCAACCTCG TTACCACCCAGTTGTACCTGGAGAATCAACGCAGTCAGATCCTGCGGGAG AAGGTGGAGCGGAAGCTCAGGAAGGCACGGGGGGATCTGAAGCTCACGGT GCAGGAGGCCAGGAGTAAGATTGCCATCCTTTCCTCCCAGCTTACAGAGG CAGAGGCTTGGAAACGCAAACTTAATGACGAGCTATCCACGGCCAAGCAG GAGGTGTATGAGGTCCACCGCAAGAATAAGTCCATGGAGCAGATGCTTGC ACGTCTTCGCAACGACGGCCACGCCATCCCTGCCGCCCTTCCACTCCCCA GCCCGGCCTCGACACCTCCCCATCAATACCAACACCTCCGCCAGCAACCG CAGCGATCGCAGCAGCAGCAGCAGCAGTACTACCCCCCTCCTTCCCCACG TATCAGCGCCAGCAGCAGCAAGTCCCCCAGTGGGCTCCAATTCCCGCAGC AGCAGCTGCTGCATCGTCCCGCCTCCGCCGCCCGCACTATCTCCCCTCAC CACCCAGGAGAAGGAGGCGGAGGAGGAGGAGATGGAGGGAGGGGGTTCCA AAATTCTTTGGTTCAGCCTACCCCATCTCGGAGTATGAGTGCTGGCAGCA GCAACGGCAGCATTTCATTGTCTCGCTCTCTGTCGCCGCATCATTATCAT CATCATCGTGGGGGGGGCTTGGCCGTCGGTGTAGGGGTGGGGGGGACGGG CGCTTGTTCACCCGCCGGGGGTCGTTCCTCCCACGCGTCCTCCTCCTCGC CTTTTGGAGGGAGATCTTTTGGCGCGAAGCAACAACACCGCGACCAACAG ACTGACAGATCTGGCAGCAGCAGCAGCAGCCACAAAAATTAGATGGAAGA AGCCGGCGAGGAGGAAGAGGGCGTACTATACGTCCACTGCAATCGGTGCC AGCAGAGCCTCTCCTCCTTCTACAAATCCTCTTGTGGGCACTGCTTTTGC GTGGACTGTGCCACCACTCATTTCGCTAAAGACCCCTGCTGCCCCGTCTG TGGCCTTCGCCTCTCCCAAAAGCACTTCCGGGGACCCTTCGACGTAGGCA TCTCTGCAGGCGAGCCCGTGGAAGCGGCCATGTACAAGAACGTCTTCACT TCCAATCGATTGGATGAGGTTCTGCAAAAGGCCTTATTGTGCTTACCAGC GGTCGAAGACGTCATCAACCTCGTTACCACCCAGTTGTACCTGGAGAATC AACGCAGTCAGATCCTGCGGGAGAAGGTGGAGCGGAAGCTCAGGAAGGCA CGGGGGGATCTGAAGCTCACGGTGCAGGAGGCCAGGAGTAAGATTGCCAT CCTTTCCTCCCAGCTTACAGAGGCAGAGGCTTGGAAACGCAAACTTAATG ACGAGCTATCCACGGCCAAGCAGGAGGTGTATGAGGTCCACCGCAAGAAT AAGTCCATGGAGCAGATGCTTGCACGTCTTCGCAACGACGGCCACGCCAT CCCTGCCGCCCTTCCACTCCCCAGCCCGGCCTCGACACCTCCCCATCAAT ACCAACACCTCCGCCAGCAACCGCAGCGATCGCAGCAGCAGCAGCAGCAG TACTACCCCCCTCCTTCCCCACGTATCAGCGCCAGCAGCAGCAAGTCCCC CAGTGGGCTCCAATTCCCGCAGCAGCAGCTGCTGCATCGTCCCGCCTCCG CCGCCCGCACTATCTCCCCTCACCACCCAGGAGAAGGAGGCGGAGGAGGA GGAGATGGAGGGAGGGGGTTCCAAAATTCTTTGGTTCAGCCTACCCCATC TCGGAGTATGAGTGCTGGCAGCAGCAACGGCAGCATTTCATTGTCTCGCT CTCTGTCGCCGCATCATTATCATCATCATCGTGGGGGGGGCTTGGCCGTC GGTGTAGGGGTGGGGGGGACGGGCGCTTGTTCACCCGCCGGGGGTCGTTC CTCCCACGCGTCCTCCTCCTCGCCTTTTGGAGGGAGATCTTTTGGCGCGA AGCAACAACACCGCGACCAACAGACTGACAGATCTGGCAGCAGCAGCAGC AGCCACAAAAATTAG back to top
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