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Properties
| Property Name | Value |
|---|
| TranscriptId | 231391 |
| Track | FilteredModels2 |
| ProteinId | 231305 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:388874..391394 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_150 ID=mRNA_150|Name=jgi.p|Nanoce1779_2|231305|organism=Nannochloropsis oceanica|type=mRNA|length=2264bp
GGCGCAGGTGGTCATGGATAAAACAAGTGCCGAATTCTGGGAAGGATGAA
CGTATAATGGAATGTGTGTGTACTTATAAATCTGTAAAGAAGGGAAACGC
AAATGTCGCCGTGAATCACTTTTGATGCATGGGCCGCAACGTACTTGTTC
GATGTTGCAGTCTTTCAAAGATGGGCAAAGCCATAGGACATCATTCACCA
CAATGAATGTATTGCTTGGAGGCAACCTTCAGTCCTAAAGCCAGCCGATA
ATTAGTGCTCTTTAATTTTGTTCTCTCTATATGATCCTCTTGTGCTGTGG
TAGGATTTATTTTACAATATGTATGTGGCTTTTGCTGGCCAAGCCAATGC
TAGATAACAGCACTTCCAGAGACACATACCCACATCACGACGATCATTCT
TATACACACAAAACGAAAGCAACCCATTTATCCACCAAATGATGAGGCTG
GCGGGATAAGCACACATGCTTTACTACATGCCCACATCTTTGCTGTCCTG
AAGACCCACTTGTTCTGCTGCTGCGCCCCTCACTTGACTGGCCCATTGCC
CGAGGCATTGCCGCTGCTCCTCTCCCCCCTCTCTCTCTATCTACAATGCG
ATGCGCATCGCTTCTCTTCCTGCTGTTGACCACCTCGATCCACGCATACC
CTGCTTATGACAACCCAATTCTTGCCAACCCTGCCCTCGTGCGCCCGGGT
CAACTCCTCTGCACGGTTGACCTGGTTCGGAACGCCGCGTGCGACGCGTA
TAACAAAATCACAACGCAGCCCTTCCCCGCGCCCTCTGACGTGCCAGCCT
GCCGCGGGTATGTGTCAAGAGTAGTCGTAGACTTTTATGGCTTTGTCAAG
GGCGTGCAATTTGATCGAAGTGGAGGGGTCTTCCTGGGGGATATTGAATT
GTTGCGGACCACCACGCCGGAGCCTTCCCCGTCGGGGATTGCATGGCACG
TGGAAAAGGATGTGAGCGACTACATACTCTACATTCTCTCCGGTCCCAAA
AATGCGACCTTGGGAATCACTAACATTGTCGACAAGACTTACACGGGCGT
TATATATGTCAACGCCACCCTTTCCTTCTATGGCCGCCCGTTTTCTTCTA
CTGATACCGCGGACGATGGTGCACAAAGCACCACTTCGTCTCCTGCCCTC
CTTCGTGGAGGCAGCAACAGCGTCGGCTTCACCACAGCCATGGATGATGA
TAATGTTGCCACCAGCAGCAGTACCAATGGCAAGAAGCACCTCAATCCCT
CCCCACAATATCGCGAGGAAGACACCGAACTTCTCCCCGAACATGGCGCC
TCTCCACCCCTTATCCTCCCCCTCGTCTTCCCCTTCAATCCCAGCACTGG
GCAATGGACCTCTCCCCCCAATTTGAACGGGGACGCAAATTTGTCTGTCT
CCCTCCCTTCTTGGCCTCAACCCAACATCGCCCGAGTCTACCTTGACTTA
ATAGCATCCCCCCACGGGTGCGAAGAATTTTTCTATACCAACCTCCCCTC
GGAAGCGGAGGATGTAGACGGAACTTCTTGCGGAGGGGGTGTCTATCGCG
AGCTACAGGTGTGGGTAGACGATACACTAGCTGGAAGTTTGTATCCAGCT
GTGGTGGTGTATACAGGGGGTGTGAATCCTTTTTTGTGGCGGCCTTTGTC
GGGGATTGGGAGTTTTGATATTCCGACATATCGATTCGACCTCACACCGT
TTGTGGGTTTATTTAATTCTGCGGCGCCTGTACCTGTGACTATGAATACG
GCAGTCACACTTTCAGCACCAGTAGCAGAAGCAGCACTGGTGGAGAATGA
GGAAAAAGAGAGAAAGAGTGCCTATGACAGTGTAACGACGATTCTGATGC
CAGCGCCTGTAGAACCAGAAACAACAGCAGCAACAGCAGCAACAGCTCGT
CCGAAGATCACTTTAAGGGCCTATGGGAACAATAATAAAGGATTTTGGTC
GATCACAAGCGCGCTGCTCCTTCATCCGGATCCTGACGTGGACAAAAGTG
TGACTTTATCGGGAGGCATTGATTCCGCCACGGACTCGGGCCCCCAATTT
ACAGTTGATATGACAGAGGGTCAAAACGACGGCAGAAACGGCATCCACGG
TAACGACAGCAGCAGCAACACCAGCAGCATTAGCAGCAGCAACACCAGCA
GCACTATTGTCATTACTTACAAGACGGTTGGGGAACAATACCCAGCAGAC
CCGCGGAAACATGGCGGATCAAGCGACCATTGAGCGACACAGCAGCGATG
GAACCAAGCTCGGA back to topprotein sequence of jgi.p|Nanoce1779_2|231305 >mRNA_150-protein ID=mRNA_150-protein|Name=jgi.p|Nanoce1779_2|231305|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp
MRCASLLFLLLTTSIHAYPAYDNPILANPALVRPGQLLCTVDLVRNAACD
AYNKITTQPFPAPSDVPACRGYVSRVVVDFYGFVKGVQFDRSGGVFLGDI
ELLRTTTPEPSPSGIAWHVEKDVSDYILYILSGPKNATLGITNIVDKTYT
GVIYVNATLSFYGRPFSSTDTADDGAQSTTSSPALLRGGSNSVGFTTAMD
DDNVATSSSTNGKKHLNPSPQYREEDTELLPEHGASPPLILPLVFPFNPS
TGQWTSPPNLNGDANLSVSLPSWPQPNIARVYLDLIASPHGCEEFFYTNL
PSEAEDVDGTSCGGGVYRELQVWVDDTLAGSLYPAVVVYTGGVNPFLWRP
LSGIGSFDIPTYRFDLTPFVGLFNSAAPVPVTMNTAVTLSAPVAEAALVE
NEEKERKSAYDSVTTILMPAPVEPETTAATAATARPKITLRAYGNNNKGF
WSITSALLLHPDPDVDKSVTLSGGIDSATDSGPQFTVDMTEGQNDGRNGI
HGNDSSSNTSSISSSNTSSTIVITYKTVGEQYPADPRKHGGSSDH* back to topmRNA from alignment at scaffold_3:388874..391394- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_150 ID=mRNA_150|Name=jgi.p|Nanoce1779_2|231305|organism=Nannochloropsis oceanica|type=mRNA|length=2521bp|location=Sequence derived from alignment at scaffold_3:388874..391394- (Nannochloropsis oceanica)
GGCGCAGGTGGTCATGGATAAAACAAGTGCCGAATTCTGGGAAGGATGAA
CGTATAATGGAATGTGTGTGTACTTATAAATCTGTAAAGAAGGGAAACGC
AAATGTCGCCGTGAATCACTTTTGATGCATGGGCCGCAACGTACTTGTTC
GATGTTGCAGTCTTTCAAAGATGGGCAAAGCCATAGGACATCATTCACCA
CAATGAATGTATTGCTTGGAGGCAACCTTCAGTCCTAAAGCCAGCCGATA
ATTAGTGCTCTTTAATTTTGTTCTCTCTATATGATCCTCTTGTGCTGTGG
TAGGATTTATTTTACAATATGTATGTGGCTTTTGCTGGCCAAGCCAATGC
TAGATAACAGCACTTCCAGAGACACATACCCACATCACGACGATCATTCT
TATACACACAAAACGAAAGCAACCCATTTATCCACCAAATGATGAGGCTG
GCGGGATAAGCACACATGCTTTACTACATGCCCACATCTTTGCTGTCCTG
AAGACCCACTTGTTCTGCTGCTGCGCCCCTCACTTGACTGGCCCATTGCC
CGAGGTAAGTCCAGTATCCCCCTCCCAAGAAAGTGAGCGTCGTGTGCATT
GCCAATATGTCTCGCCGCCGTGTGGATGTGTTTAAATATCGATATAAAAG
TCGGCTCAGCAACACATCCTCACGCTATTACGCCCTACGGCACACCGACA
GGCATTGCCGCTGCTCCTCTCCCCCCTCTCTCTCTATCTACAATGCGATG
CGCATCGCTTCTCTTCCTGCTGTTGACCACCTCGATCCACGCATACCCTG
CTTATGACAACCCAATTCTTGCCAACCCTGCCCTCGTGCGCCCGGGTCAA
CTCCTCTGCACGGTTGACCTGGTTCGGAACGCCGCGTGCGACGCGTATAA
CAAAATCACAACGCAGCCCTTCCCCGCGCCCTCTGACGTGCCAGCCTGCC
GCGGGTATGTGTCAAGAGTAGTCGTAGACTTTTATGGCTTTGTCAAGGGC
GTGCAATTTGATCGAAGTGGAGGGGTCTTCCTGGGGGATATTGAATTGTT
GCGGACCACCACGCCGGAGCCTTCCCCGTCGGGGATTGCATGGCACGTGG
AAAAGGATGTGAGCGACTACATACTCTACATTCTCTCCGGTCCCAAAAAT
GCGACCTTGGGAATCACTAACATTGTCGACAAGACTTACACGGGCGTTAT
ATATGTCAACGCCACCCTTTCCTTCTATGGCCGCCCGTTTTCTTCTACTG
ATACCGCGGACGATGGTGCACAAAGCACCACTTCGTCTCCTGCCCTCCTT
CGTGGAGGCAGCAACAGCGTCGGCTTCACCACAGCCATGGATGATGATAA
TGTTGCCACCAGCAGCAGTACCAATGGCAAGAAGCACCTCAATCCCTCCC
CACAATATCGCGAGGAAGACACCGAACTTCTCCCCGAACATGGCGCCTCT
CCACCCCTTATCCTCCCCCTCGTCTTCCCCTTCAATCCCAGCACTGGGCA
ATGGACCTCTCCCCCCAATTTGAACGGGGACGCAAATTTGTCTGTCTCCC
TCCCTTCTTGGCCTCAACCCAACATCGCCCGAGTCTACCTTGACTTAATA
GCATCCCCCCACGGGTGCGAAGAATTTTTCTATACCAACCTCCCCTCGGA
AGCGGAGGATGTAGACGGAACTTCTTGCGGAGGGGGTGTCTATCGCGAGC
TACAGGTGTGGGTAGACGATACACTAGCTGGAAGTTTGTATCCAGCTGTG
GTGGTGTATACAGGGGGTGTGAATCCTTTTTTGTGGCGGCCTTTGTCGGG
GATTGGGAGTTTTGATATTCCGACATATCGATTCGACCTCACACCGTTTG
TGGGTTTATTTAATTCTGCGGCGCCTGTACCTGTGACTATGAATACGGCA
GTCACACTTTCAGCACCAGTAGCAGAAGCAGCACTGGTGGAGAATGAGGA
AAAAGAGAGAAAGAGTGCCTATGACAGTGTAACGACGATTCTGATGCCAG
CGCCTGTAGAACCAGAAACAACAGCAGCAACAGCAGCAACAGCTCGTCCG
AAGATCACTTTAAGGGCCTATGGGAACAATAATAAAGGATTTTGGTCGAT
CACAAGCGCGCTGCTCCTTCATCCGGATCCTGACGTGGACAAAAGTGTGA
CTTTATCGGGAGGCATTGATTCCGCCACGGACTCGGGCCCCCAATTTACA
GTTGATATGACAGAGGGTCAAAACGACGGCAGAAACGGCATCCACGGTAA
CGACAGCAGCAGCAACACCAGCAGCATTAGCAGCAGCAACACCAGCAGCA
CTATTGTCATTACTTACAAGACGGTTGGGTATCATGCGTTTTCGGTCTCG
GGCAGCCTGCATTACCCTAATGGCACCTTTTCGACGACCACCACCGTGAC
TGCTCACCTCTCTTCGTGGAATGAAAATATATTCTTAGGGAACAATACCC
AGCAGACCCGCGGAAACATGGCGGATCAAGCGACCATTGAGCGACACAGC
AGCGATGGAACCAAGCTCGGA back to topCoding sequence (CDS) from alignment at scaffold_3:388874..391394- >mRNA_150 ID=mRNA_150|Name=jgi.p|Nanoce1779_2|231305|organism=Nannochloropsis oceanica|type=CDS|length=3276bp|location=Sequence derived from alignment at scaffold_3:388874..391394- (Nannochloropsis oceanica)
GGAACAATACCCAGCAGACCCGCGGAAACATGGCGGATCAAGCGACCATT
GAATGCGATGCGCATCGCTTCTCTTCCTGCTGTTGACCACCTCGATCCAC
GCATACCCTGCTTATGACAACCCAATTCTTGCCAACCCTGCCCTCGTGCG
CCCGGGTCAACTCCTCTGCACGGTTGACCTGGTTCGGAACGCCGCGTGCG
ACGCGTATAACAAAATCACAACGCAGCCCTTCCCCGCGCCCTCTGACGTG
CCAGCCTGCCGCGGGTATGTGTCAAGAGTAGTCGTAGACTTTTATGGCTT
TGTCAAGGGCGTGCAATTTGATCGAAGTGGAGGGGTCTTCCTGGGGGATA
TTGAATTGTTGCGGACCACCACGCCGGAGCCTTCCCCGTCGGGGATTGCA
TGGCACGTGGAAAAGGATGTGAGCGACTACATACTCTACATTCTCTCCGG
TCCCAAAAATGCGACCTTGGGAATCACTAACATTGTCGACAAGACTTACA
CGGGCGTTATATATGTCAACGCCACCCTTTCCTTCTATGGCCGCCCGTTT
TCTTCTACTGATACCGCGGACGATGGTGCACAAAGCACCACTTCGTCTCC
TGCCCTCCTTCGTGGAGGCAGCAACAGCGTCGGCTTCACCACAGCCATGG
ATGATGATAATGTTGCCACCAGCAGCAGTACCAATGGCAAGAAGCACCTC
AATCCCTCCCCACAATATCGCGAGGAAGACACCGAACTTCTCCCCGAACA
TGGCGCCTCTCCACCCCTTATCCTCCCCCTCGTCTTCCCCTTCAATCCCA
GCACTGGGCAATGGACCTCTCCCCCCAATTTGAACGGGGACGCAAATTTG
TCTGTCTCCCTCCCTTCTTGGCCTCAACCCAACATCGCCCGAGTCTACCT
TGACTTAATAGCATCCCCCCACGGGTGCGAAGAATTTTTCTATACCAACC
TCCCCTCGGAAGCGGAGGATGTAGACGGAACTTCTTGCGGAGGGGGTGTC
TATCGCGAGCTACAGGTGTGGGTAGACGATACACTAGCTGGAAGTTTGTA
TCCAGCTGTGGTGGTGTATACAGGGGGTGTGAATCCTTTTTTGTGGCGGC
CTTTGTCGGGGATTGGGAGTTTTGATATTCCGACATATCGATTCGACCTC
ACACCGTTTGTGGGTTTATTTAATTCTGCGGCGCCTGTACCTGTGACTAT
GAATACGGCAGTCACACTTTCAGCACCAGTAGCAGAAGCAGCACTGGTGG
AGAATGAGGAAAAAGAGAGAAAGAGTGCCTATGACAGTGTAACGACGATT
CTGATGCCAGCGCCTGTAGAACCAGAAACAACAGCAGCAACAGCAGCAAC
AGCTCGTCCGAAGATCACTTTAAGGGCCTATGGGAACAATAATAAAGGAT
TTTGGTCGATCACAAGCGCGCTGCTCCTTCATCCGGATCCTGACGTGGAC
AAAAGTGTGACTTTATCGGGAGGCATTGATTCCGCCACGGACTCGGGCCC
CCAATTTACAGTTGATATGACAGAGGGTCAAAACGACGGCAGAAACGGCA
TCCACGGTAACGACAGCAGCAGCAACACCAGCAGCATTAGCAGCAGCAAC
ACCAGCAGCACTATTGTCATTACTTACAAGACGGTTGGGGAACAATACCC
AGCAGACCCGCGGAAACATGGCGGATCAAGCGACCATTGAATGCGATGCG
CATCGCTTCTCTTCCTGCTGTTGACCACCTCGATCCACGCATACCCTGCT
TATGACAACCCAATTCTTGCCAACCCTGCCCTCGTGCGCCCGGGTCAACT
CCTCTGCACGGTTGACCTGGTTCGGAACGCCGCGTGCGACGCGTATAACA
AAATCACAACGCAGCCCTTCCCCGCGCCCTCTGACGTGCCAGCCTGCCGC
GGGTATGTGTCAAGAGTAGTCGTAGACTTTTATGGCTTTGTCAAGGGCGT
GCAATTTGATCGAAGTGGAGGGGTCTTCCTGGGGGATATTGAATTGTTGC
GGACCACCACGCCGGAGCCTTCCCCGTCGGGGATTGCATGGCACGTGGAA
AAGGATGTGAGCGACTACATACTCTACATTCTCTCCGGTCCCAAAAATGC
GACCTTGGGAATCACTAACATTGTCGACAAGACTTACACGGGCGTTATAT
ATGTCAACGCCACCCTTTCCTTCTATGGCCGCCCGTTTTCTTCTACTGAT
ACCGCGGACGATGGTGCACAAAGCACCACTTCGTCTCCTGCCCTCCTTCG
TGGAGGCAGCAACAGCGTCGGCTTCACCACAGCCATGGATGATGATAATG
TTGCCACCAGCAGCAGTACCAATGGCAAGAAGCACCTCAATCCCTCCCCA
CAATATCGCGAGGAAGACACCGAACTTCTCCCCGAACATGGCGCCTCTCC
ACCCCTTATCCTCCCCCTCGTCTTCCCCTTCAATCCCAGCACTGGGCAAT
GGACCTCTCCCCCCAATTTGAACGGGGACGCAAATTTGTCTGTCTCCCTC
CCTTCTTGGCCTCAACCCAACATCGCCCGAGTCTACCTTGACTTAATAGC
ATCCCCCCACGGGTGCGAAGAATTTTTCTATACCAACCTCCCCTCGGAAG
CGGAGGATGTAGACGGAACTTCTTGCGGAGGGGGTGTCTATCGCGAGCTA
CAGGTGTGGGTAGACGATACACTAGCTGGAAGTTTGTATCCAGCTGTGGT
GGTGTATACAGGGGGTGTGAATCCTTTTTTGTGGCGGCCTTTGTCGGGGA
TTGGGAGTTTTGATATTCCGACATATCGATTCGACCTCACACCGTTTGTG
GGTTTATTTAATTCTGCGGCGCCTGTACCTGTGACTATGAATACGGCAGT
CACACTTTCAGCACCAGTAGCAGAAGCAGCACTGGTGGAGAATGAGGAAA
AAGAGAGAAAGAGTGCCTATGACAGTGTAACGACGATTCTGATGCCAGCG
CCTGTAGAACCAGAAACAACAGCAGCAACAGCAGCAACAGCTCGTCCGAA
GATCACTTTAAGGGCCTATGGGAACAATAATAAAGGATTTTGGTCGATCA
CAAGCGCGCTGCTCCTTCATCCGGATCCTGACGTGGACAAAAGTGTGACT
TTATCGGGAGGCATTGATTCCGCCACGGACTCGGGCCCCCAATTTACAGT
TGATATGACAGAGGGTCAAAACGACGGCAGAAACGGCATCCACGGTAACG
ACAGCAGCAGCAACACCAGCAGCATTAGCAGCAGCAACACCAGCAGCACT
ATTGTCATTACTTACAAGACGGTTGG back to top
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