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Properties
Property Name | Value |
TranscriptId | 507314 |
Track | FilteredModels2 |
ProteinId | 507228 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:712715..715597 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1474 ID=mRNA_1474|Name=jgi.p|Nanoce1779_2|507228|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp ATGGGGACCTTTGTCCTCGCGCTCACCTTGGGTATCGCCTGTCGGGCTTG GTTGTCGAAATGGACTCGTCTACCCTACACGTGTTTGGTGCTGCTTCTAG GCCTGCTGTACGGTTTTGTCCTCTACACTGAGGTGGCCAGGACGGGACCG GACCTGATTAGCCTCTCGGCCGACCTGTGGATCAATATTTCCCCCGAGGC GATTCTGACCGTTATTCTGCCCGTCCTCATTTTTGGCTCCTCCTTTGCCT GTGACCTCCACCTTTTCCTTCAGCTGAAAGGACCTATTCTCACACTCGCA GGACCCGCGGTTCTCATCAACACAGCAATCTTGGGAGTCAGCGTCAAGTA CGTCTTGCCCTATGGGTGGGACTGGCCGACCTCCTTTATGGTCGCCTCCA TCCTTGCCGCCACGGACCCAGTCGCCGTGGTGGCCATTCTTAAGGAGCTG GGAGTGGCAGAATCCCTCTCGACATTAATTGACGGGGAATCATTACTGAA CGATGGTGTAGCGATAGTTCTTTACTCCATCTTTTCTCACCTAGTGGTCC ACGAAGAAAGCTTTTCCCCCATGGGCACATTTGAGGAGGCCTTGGTGCTG TGCCTGGGCGGTCCTGCGATTGGAGTGGGTGTGGGTATTGCAGCCTCAAC TTTCTTAGGCTTCTTAATTAATGACCCAGCCTCGGAGATAACTGTCACTA TTGTTGCCGGCTACGGCTCGTACTTACTCGCTGAGCTTGCCGAGGCGTCT GGGGTCCTTTCCATGGTTGCTGCTGGCTTGTACCTCTCCTATCATGGTCT GGGACGTATTTCAGCGCGTGTTACAGAGAGCCTGCATTCGTTTTGGGAGA TGGCGGAATGGATCGCGAACACCTTGATATTTTTCTTGAGTGGACTCATC ATGGCGGAGAGGGCCTTGGTGTCTGCCACCGTGCACGGCGTCGATTGGGC CTACCTCCTGCTCGTTTACGTTATTTTGAACATAACGAGGGCGTTTGGCG TTTTGATTTGCTTCCCTGTACTCGTGCGAGGTCCATATGGAATATCTTTG CGACAAGCCGTGCTGTTGTCGTGGGGTGGATTGCGAGGAGCTGTTTCGCT CACGTTGTCCATCGCCGTCAGTCAAGTCGAGGGCATTCCCGAGGAGACGC GGGCACGCATTTCTTTTCTGATCGCAGGCATCGTCTTGTTGACTATTCTC ATCAATGGGACGACTTGTAAGCCCTTACTGAACCGTTTAGGCCTCAACAA TCCTAGTGAAGCGGAGCGGGAGTTGTTCATCCGCGCGACCAATATGGTGG AAGGTGGATTGGAAAAAGCCCTCCGGGAGCTGAAGCGCGATAAGTACCTG GGAGACGCCGACTGGAACATCGTATTTCGCTACCTTCCTGTGCCCACCGC CCAAGTTTATTGGCACCGGGAAAATGGCGACCATGCACTTTCCTTTGCTC AGTCCTTGGCCGAGGCCCGCCTTCGACTCATGACCATACTCAAGCATGTC TATTGGGGTTCTTTTCAGTCCGGCCTTCTGTCGCCGACTGGGATCCGTGC CTTTGACAGCAACATGGCCTTGCTGGTGCTGACCCCACATAAGGAGTTGG ATGAGTGGACGGCACTCGAAACTCGTGTGCTCTTGGCTTTGCGTACAATG CAGGAGAACCAACGCTGGCGCCGTCTTCCTCTGGTGGGGAAACTTGTACA GACCATGTTATTTAACCGCCTGGCATTTTTTTTTGAACTGGCCATGGTGT TTATAGAGGCACACAGCAACGTAGACCTTGAAGGGCTCTTTGGCGTCGGG CCGATGGCCCGTCAGCTTGCGCGTGAAGTGGATGCAGAGGTGTTGCGGGC CAAGGCTGCCCTCAAAGAATTTCTCCCCGTATTTCCCGATATTATCAACA GTGTCAAGACCGAGATCGCTGCGCGTTTCCTGCTGAACAAGTACCGCTCA CTTCTCGAGCATGCAGTGGAGTCAGGATCGTTAGAACAGAAGGAGTTCGA CACGGGTATTAAGGCCGTGGATGCCTCCATGGTCAAGCTGTACGATCACA CCCACAATGAGATTGCTGCTCCCCGCCCGGTTCTGCTCAACAACCTCTCC TTCCTC back to topprotein sequence of jgi.p|Nanoce1779_2|507228 >mRNA_1474-protein ID=mRNA_1474-protein|Name=jgi.p|Nanoce1779_2|507228|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp MGTFVLALTLGIACRAWLSKWTRLPYTCLVLLLGLLYGFVLYTEVARTGP DLISLSADLWINISPEAILTVILPVLIFGSSFACDLHLFLQLKGPILTLA GPAVLINTAILGVSVKYVLPYGWDWPTSFMVASILAATDPVAVVAILKEL GVAESLSTLIDGESLLNDGVAIVLYSIFSHLVVHEESFSPMGTFEEALVL CLGGPAIGVGVGIAASTFLGFLINDPASEITVTIVAGYGSYLLAELAEAS GVLSMVAAGLYLSYHGLGRISARVTESLHSFWEMAEWIANTLIFFLSGLI MAERALVSATVHGVDWAYLLLVYVILNITRAFGVLICFPVLVRGPYGISL RQAVLLSWGGLRGAVSLTLSIAVSQVEGIPEETRARISFLIAGIVLLTIL INGTTCKPLLNRLGLNNPSEAERELFIRATNMVEGGLEKALRELKRDKYL GDADWNIVFRYLPVPTAQVYWHRENGDHALSFAQSLAEARLRLMTILKHV YWGSFQSGLLSPTGIRAFDSNMALLVLTPHKELDEWTALETRVLLALRTM QENQRWRRLPLVGKLVQTMLFNRLAFFFELAMVFIEAHSNVDLEGLFGVG PMARQLAREVDAEVLRAKAALKEFLPVFPDIINSVKTEIAARFLLNKYRS LLEHAVESGSLEQKEFDTGIKAVDASMVKLYDHTHNEIAAPRPVLLNNLS FL back to topmRNA from alignment at scaffold_1:712715..715597+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1474 ID=mRNA_1474|Name=jgi.p|Nanoce1779_2|507228|organism=Nannochloropsis oceanica|type=mRNA|length=2883bp|location=Sequence derived from alignment at scaffold_1:712715..715597+ (Nannochloropsis oceanica) ATGGGGACCTTTGTCCTCGCGCTCACCTTGGGTATCGCCTGTCGGGCTTG
GTTGTCGAAATGGACTCGTCTACCCTACACGTGTTTGGTGCTGCTTCTAG
GCCTGCTGTACGGTTTTGTCCTCTACACTGAGGTGGCCAGGACGGGACCG
GACCTGATTAGCCTCTCGGCCGACCTGTGGATCAATATTTCCCCCGAGGC
GATTCTGACCGTTATTCTGCCCGTCCTCATTTTTGGCTCCTCCTTTGCCT
GTGACCTCCACCTTTTCCTTCAGCTGAAAGGACCTATTCTCACACTCGCA
GGACCCGCGGTTCTCATCAACACAGCAATCTTGGGAGTCAGCGTCAAGTA
CGTCTTGCCCTATGGGTGGGACTGGCCGACCTCCTTTATGGTCGCCTCCA
TCCTTGCCGCCACGGACCCAGTCGCCGTGGTGGCCATTCTTAAGGAGCTG
GGAGTGGCAGAATCCCTCTCGACATTAATTGACGGGGAATCATTACTGAA
CGATGGTGTAGCGATAGTTCTTTACTCCATCTTTTCTCACCTAGTGGTCC
ACGAAGAAAGCTTTTCCCCCATGGGCACATTTGAGGAGGCCTTGGTGCTG
TGCCTGGGCGGTCCTGCGATTGGAGTGGGTGTGGGTATTGCAGCCTCAAC
TTTCTTAGGCTTCTTAATTAATGACCCAGCCTCGGAGATAACTGTCACTA
TTGTTGCCGGCTACGGCTCGTACTTACTCGCTGAGCTTGCCGAGGCGTCT
GGGGTCCTTTCCATGGTTGCTGCTGGCTTGTACCTCTCCTATCATGGTCT
GGGACGTATTTCAGCGCGTGTTACAGAGAGCCTGCATTCGTTTTGGGAGA
TGGCGGAATGGATCGCGAACACCTTGATATTTTTCTTGAGTGGACTCATC
ATGGCGGAGAGGGCCTTGGTGTCTGCCACCGTGCACGGCGTCGATTGGGC
CTACCTCCTGCTCGTTTACGTTATTTTGAACATAACGAGGGCGTTTGGCG
TTTTGATTTGCTTCCCTGTACTCGTGCGAGGTCCATATGGAATATCTTTG
CGACAAGCCGTGCTGTTGTCGTGGGGTGGATTGCGAGGAGCTGTTTCGCT
CACGTTGTCCATCGCCGTCAGTCAAGTCGAGGGCATTCCCGAGGAGACGC
GGGCACGCATTTCTTTTCTGATCGCAGGCATCGTCTTGTTGACTATTCTC
ATCAATGGGACGACTTGTAAGCCCTTACTGAACCGTTTAGGCCTCAACAA
TCCTAGTGAAGCGGAGCGGGAGTTGTTCATCCGCGCGACCAATATGGTGG
AAGGTGGATTGGAAAAAGCCCTCCGGGAGCTGAAGCGCGATAAGTACCTG
GGAGACGCCGACTGGAACATCGTATTTCGCTACCTTCCTGTGCCCACCGC
CCAAGTTTATTGGCACCGGGTGCAGGCAGGGCATCTCAAGCTGAATGAGG
AAGAGTTGGCCCTGATTGGCGCCTACGTCCAGGGAGGGGTGGAGGATCGA
ATGCTGACAAACAAGATGAGTGCACAAGAAGCAGCCGGCCTAGGCATACC
AGCAGCACCCATGCCACTGGAACGGCTATCTCCAGCCGTAACATGGATGA
CCTCCCTGGGTCGATGGTTACAGGGGGGGCACTGGTCCCTCATCCCGGGC
AGCAAGTACGAGGAACTTCCTCCTCGGCTGAGGAATAGGTGGCGCCGTTA
CACCCTCGAAAACAACGATTTGGGAGGGGTGCTCCATGGCGACAAGCTCA
TGGTCATTCGTGAGGCCACGTACGAGCGTTTGATTAATCCCTTGGTGCTG
CCCGAGGAAAATTGGGAAGACGATAAGGAGGAAGTGGTGGTTGATGGGGG
CACAGGAAAGGCCATACACGTGCACGAGCTCAACGTTTCGGCGATGATGG
ATGATTATGAGCAGGAGGGCAGTGGAGATTTTAAGAGGAAAAAAAAGCTG
CTGCGAACGAATACCACCGCGGTACCCACCTCCCAGATGCTGGCGGCTTC
GCCGGCCTTTGTCGTCCCACCTGTGCCTCGTGCCAAGAGCTTCACTGTGG
CCGTCACTGCCAATCAACCACGCCTGCACACGGGTCCTATGACGACCACA
CCTGCTCTGGGCCCTATCATCACTGAAGGAGAGGAGGAGGAGTGTGAAGA
TGACGTAGTGGTAGAATGTGGCAAAGCCAGCGGGACAAAAGTTGAGGAAA
ATGGCGACCATGCACTTTCCTTTGCTCAGTCCTTGGCCGAGGCCCGCCTT
CGACTCATGACCATACTCAAGCATGTCTATTGGGGTTCTTTTCAGTCCGG
CCTTCTGTCGCCGACTGGGATCCGTGCCTTTGACAGCAACATGGCCTTGC
TGGTGCTGACCCCACATAAGGAGTTGGATGAGTGGACGGCACTCGAAACT
CGTGTGCTCTTGGCTTTGCGTACAATGCAGGAGAACCAACGCTGGCGCCG
TCTTCCTCTGGTGGGGAAACTTGTACAGACCATGTTATTTAACCGCCTGG
CATTTTTTTTTGAACTGGCCATGGTGTTTATAGAGGCACACAGCAACGTA
GACCTTGAAGGGCTCTTTGGCGTCGGGCCGATGGCCCGTCAGCTTGCGCG
TGAAGTGGATGCAGAGGTGTTGCGGGCCAAGGCTGCCCTCAAAGAATTTC
TCCCCGTATTTCCCGATATTATCAACAGTGTCAAGACCGAGATCGCTGCG
CGTTTCCTGCTGAACAAGTACCGCTCACTTCTCGAGCATGCAGTGGAGTC
AGGATCGTTAGAACAGAAGGAGTTCGACACGGGTATTAAGGCCGTGGATG
CCTCCATGGTCAAGCTGTACGATCACACCCACAATGAGATTGCTGCTCCC
CGCCCGGTTCTGCTCAACAACCTCTCCTTCCTC back to topCoding sequence (CDS) from alignment at scaffold_1:712715..715597+ >mRNA_1474 ID=mRNA_1474|Name=jgi.p|Nanoce1779_2|507228|organism=Nannochloropsis oceanica|type=CDS|length=4212bp|location=Sequence derived from alignment at scaffold_1:712715..715597+ (Nannochloropsis oceanica) ATGGGGACCTTTGTCCTCGCGCTCACCTTGGGTATCGCCTGTCGGGCTTG GTTGTCGAAATGGACTCGTCTACCCTACACGTGTTTGGTGCTGCTTCTAG GCCTGCTGTACGGTTTTGTCCTCTACACTGAGGTGGCCAGGACGGGACCG GACCTGATTAGCCTCTCGGCCGACCTGTGGATCAATATTTCCCCCGAGGC GATTCTGACCGTTATTCTGCCCGTCCTCATTTTTGGCTCCTCCTTTGCCT GTGACCTCCACCTTTTCCTTCAGCTGAAAGGACCTATTCTCACACTCGCA GGACCCGCGGTTCTCATCAACACAGCAATCTTGGGAGTCAGCGTCAAGTA CGTCTTGCCCTATGGGTGGGACTGGCCGACCTCCTTTATGGTCGCCTCCA TCCTTGCCGCCACGGACCCAGTCGCCGTGGTGGCCATTCTTAAGGAGCTG GGAGTGGCAGAATCCCTCTCGACATTAATTGACGGGGAATCATTACTGAA CGATGGTGTAGCGATAGTTCTTTACTCCATCTTTTCTCACCTAGTGGTCC ACGAAGAAAGCTTTTCCCCCATGGGCACATTTGAGGAGGCCTTGGTGCTG TGCCTGGGCGGTCCTGCGATTGGAGTGGGTGTGGGTATTGCAGCCTCAAC TTTCTTAGGCTTCTTAATTAATGACCCAGCCTCGGAGATAACTGTCACTA TTGTTGCCGGCTACGGCTCGTACTTACTCGCTGAGCTTGCCGAGGCGTCT GGGGTCCTTTCCATGGTTGCTGCTGGCTTGTACCTCTCCTATCATGGTCT GGGACGTATTTCAGCGCGTGTTACAGAGAGCCTGCATTCGTTTTGGGAGA TGGCGGAATGGATCGCGAACACCTTGATATTTTTCTTGAGTGGACTCATC ATGGCGGAGAGGGCCTTGGTGTCTGCCACCGTGCACGGCGTCGATTGGGC CTACCTCCTGCTCGTTTACGTTATTTTGAACATAACGAGGGCGTTTGGCG TTTTGATTTGCTTCCCTGTACTCGTGCGAGGTCCATATGGAATATCTTTG CGACAAGCCGTGCTGTTGTCGTGGGGTGGATTGCGAGGAGCTGTTTCGCT CACGTTGTCCATCGCCGTCAGTCAAGTCGAGGGCATTCCCGAGGAGACGC GGGCACGCATTTCTTTTCTGATCGCAGGCATCGTCTTGTTGACTATTCTC ATCAATGGGACGACTTGTAAGCCCTTACTGAACCGTTTAGGCCTCAACAA TCCTAGTGAAGCGGAGCGGGAGTTGTTCATCCGCGCGACCAATATGGTGG AAGGTGGATTGGAAAAAGCCCTCCGGGAGCTGAAGCGCGATAAGTACCTG GGAGACGCCGACTGGAACATCGTATTTCGCTACCTTCCTGTGCCCACCGC CCAAGTTTATTGGCACCGGGAAAATGGCGACCATGCACTTTCCTTTGCTC AGTCCTTGGCCGAGGCCCGCCTTCGACTCATGACCATACTCAAGCATGTC TATTGGGGTTCTTTTCAGTCCGGCCTTCTGTCGCCGACTGGGATCCGTGC CTTTGACAGCAACATGGCCTTGCTGGTGCTGACCCCACATAAGGAGTTGG ATGAGTGGACGGCACTCGAAACTCGTGTGCTCTTGGCTTTGCGTACAATG CAGGAGAACCAACGCTGGCGCCGTCTTCCTCTGGTGGGGAAACTTGTACA GACCATGTTATTTAACCGCCTGGCATTTTTTTTTGAACTGGCCATGGTGT TTATAGAGGCACACAGCAACGTAGACCTTGAAGGGCTCTTTGGCGTCGGG CCGATGGCCCGTCAGCTTGCGCGTGAAGTGGATGCAGAGGTGTTGCGGGC CAAGGCTGCCCTCAAAGAATTTCTCCCCGTATTTCCCGATATTATCAACA GTGTCAAGACCGAGATCGCTGCGCGTTTCCTGCTGAACAAGTACCGCTCA CTTCTCGAGCATGCAGTGGAGTCAGGATCGTTAGAACAGAAGGAGTTCGA CACGGGTATTAAGGCCGTGGATGCCTCCATGGTCAAGCTGTACGATCACA CCCACAATGAGATTGCTGCTCCCCGCCCGGTTCTGCTCAACAACCTCTCC TTCCTCATGGGGACCTTTGTCCTCGCGCTCACCTTGGGTATCGCCTGTCG GGCTTGGTTGTCGAAATGGACTCGTCTACCCTACACGTGTTTGGTGCTGC TTCTAGGCCTGCTGTACGGTTTTGTCCTCTACACTGAGGTGGCCAGGACG GGACCGGACCTGATTAGCCTCTCGGCCGACCTGTGGATCAATATTTCCCC CGAGGCGATTCTGACCGTTATTCTGCCCGTCCTCATTTTTGGCTCCTCCT TTGCCTGTGACCTCCACCTTTTCCTTCAGCTGAAAGGACCTATTCTCACA CTCGCAGGACCCGCGGTTCTCATCAACACAGCAATCTTGGGAGTCAGCGT CAAGTACGTCTTGCCCTATGGGTGGGACTGGCCGACCTCCTTTATGGTCG CCTCCATCCTTGCCGCCACGGACCCAGTCGCCGTGGTGGCCATTCTTAAG GAGCTGGGAGTGGCAGAATCCCTCTCGACATTAATTGACGGGGAATCATT ACTGAACGATGGTGTAGCGATAGTTCTTTACTCCATCTTTTCTCACCTAG TGGTCCACGAAGAAAGCTTTTCCCCCATGGGCACATTTGAGGAGGCCTTG GTGCTGTGCCTGGGCGGTCCTGCGATTGGAGTGGGTGTGGGTATTGCAGC CTCAACTTTCTTAGGCTTCTTAATTAATGACCCAGCCTCGGAGATAACTG TCACTATTGTTGCCGGCTACGGCTCGTACTTACTCGCTGAGCTTGCCGAG GCGTCTGGGGTCCTTTCCATGGTTGCTGCTGGCTTGTACCTCTCCTATCA TGGTCTGGGACGTATTTCAGCGCGTGTTACAGAGAGCCTGCATTCGTTTT GGGAGATGGCGGAATGGATCGCGAACACCTTGATATTTTTCTTGAGTGGA CTCATCATGGCGGAGAGGGCCTTGGTGTCTGCCACCGTGCACGGCGTCGA TTGGGCCTACCTCCTGCTCGTTTACGTTATTTTGAACATAACGAGGGCGT TTGGCGTTTTGATTTGCTTCCCTGTACTCGTGCGAGGTCCATATGGAATA TCTTTGCGACAAGCCGTGCTGTTGTCGTGGGGTGGATTGCGAGGAGCTGT TTCGCTCACGTTGTCCATCGCCGTCAGTCAAGTCGAGGGCATTCCCGAGG AGACGCGGGCACGCATTTCTTTTCTGATCGCAGGCATCGTCTTGTTGACT ATTCTCATCAATGGGACGACTTGTAAGCCCTTACTGAACCGTTTAGGCCT CAACAATCCTAGTGAAGCGGAGCGGGAGTTGTTCATCCGCGCGACCAATA TGGTGGAAGGTGGATTGGAAAAAGCCCTCCGGGAGCTGAAGCGCGATAAG TACCTGGGAGACGCCGACTGGAACATCGTATTTCGCTACCTTCCTGTGCC CACCGCCCAAGTTTATTGGCACCGGGAAAATGGCGACCATGCACTTTCCT TTGCTCAGTCCTTGGCCGAGGCCCGCCTTCGACTCATGACCATACTCAAG CATGTCTATTGGGGTTCTTTTCAGTCCGGCCTTCTGTCGCCGACTGGGAT CCGTGCCTTTGACAGCAACATGGCCTTGCTGGTGCTGACCCCACATAAGG AGTTGGATGAGTGGACGGCACTCGAAACTCGTGTGCTCTTGGCTTTGCGT ACAATGCAGGAGAACCAACGCTGGCGCCGTCTTCCTCTGGTGGGGAAACT TGTACAGACCATGTTATTTAACCGCCTGGCATTTTTTTTTGAACTGGCCA TGGTGTTTATAGAGGCACACAGCAACGTAGACCTTGAAGGGCTCTTTGGC GTCGGGCCGATGGCCCGTCAGCTTGCGCGTGAAGTGGATGCAGAGGTGTT GCGGGCCAAGGCTGCCCTCAAAGAATTTCTCCCCGTATTTCCCGATATTA TCAACAGTGTCAAGACCGAGATCGCTGCGCGTTTCCTGCTGAACAAGTAC CGCTCACTTCTCGAGCATGCAGTGGAGTCAGGATCGTTAGAACAGAAGGA GTTCGACACGGGTATTAAGGCCGTGGATGCCTCCATGGTCAAGCTGTACG ATCACACCCACAATGAGATTGCTGCTCCCCGCCCGGTTCTGCTCAACAAC CTCTCCTTCCTC back to top
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