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Properties
Property Name | Value |
TranscriptId | 231208 |
Track | FilteredModels2 |
ProteinId | 231122 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_3 | supercontig | scaffold_3:378184..381314 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_146 ID=mRNA_146|Name=jgi.p|Nanoce1779_2|231122|organism=Nannochloropsis oceanica|type=mRNA|length=3021bp CCAGATTTGACCTCCCGGCTGTGTCCACCAGCTTGCCGTCACCTTTTATT TAACAACACACGCCAAGTCCACATTCCCTTCGCATCCCACATAGGTAGTG TGGAGAGTAACCCATAAGCAATGGCGCCCGACCCCCCGGCAGCAGCACCC GACGCAGGATTCACGCGGTTATGTGTCAAAAATGTACCGAAGCATGTAGA CGAGCGCCGGCTCAAGGTGCACTTTGGGCAGCAAGGCATGGTGACGGATG CCAAACTGCTGCGGACCAAGAGAGGGGAGTCGCGCAAGATGGCCTTCGTG GGCTTCCGGACTGAGACCGAGGCGCGTGCAGCGCTGGAATATTTCAATCA GACTTTTCTGGACACGTCAAGATTAGTGGTGGAGGCGGCCATGCCGCGAG GGGCTAATACTTTGCCGAGGCCCTGGAGCAAGTACTCAGAGGGTAGTTCC CGCTTTGGCAACAATGGCAGCGGTAGCAGCAGCAGCAGCAGTAGCAAGCG ACGAATGGCTGACGAGGCAGAGATTGGGGAAGAAGATGATGAAGACAATG TCACAGTGGTGGCAGCCAAGGTGAAGAAGCAGCGGCGCGTGAGCAAGGAT GAGTTTTTGGCTACAATGATGCCCCGCTCTCAGACCAAGTTTTGGGGAAA TGACGAGTTGCTCGTCGTACCGGAGGCGCATGTCAAGATGAGCGAGCAGA AGAATCAGGAGAGACAAGGGCAACAACGGCTAAAAGTCATGAAGGGAAAG AATGGGGAGAGGTCAAGCAAGCGCAATCCTGCAGGAGAAGAGGAGCTGTC CGATGACGGGCATCAGAGTGAGGAGGATAGGGAGGAGGAGAGTGAGGAAG AGGAGGATGGAGAGGAGGAAGTTGACAACGAGGAATATGCACCGTTGACA CTGCCGACGCCTATCGCAGGAATTTCGGATCTAGACTATCTGCGTTCTAA AGTGAAAAAGGGGCTGGAGCAAGAGATGGGGGGGGGCACCAGTACTGGCA GTAGAAGTAGTAGTGGCGAGACAACGAAGAAGAAGGAAGAAGAGGATGTA GAAGAGAAAATTTATGAGGATGGAAGTAGCAAAAACGGAAAACACAAGGA AGAGGAGGAGGAAGAAAGTGCGGGGCCTTCCGGCTTGGAAGAACATGATG ATGACAAGGAGAGTCACAACACCAAGCCTCTCTCCCAACCCCAAGAGCTA CCGAACGTCGAAGAGACAGGCCGGCTCTTCCTCCGAAACCTTCCCTTCTC CACCACCGAAGAAGACCTAATGGAGTTGCTAACCCACCACGGGCAAGTCG CCGAAGTCCACCTTCCCCTCGACGACACTAAGCGGCCCAAAGGTTTCGCC TTCGCTTCCTTCCTCCTTCCTGAGGATGCCGCACGGGCACTCGCCGCCGT TGATGGACAGGCATTTCAAGGGCGATTGTTGCATGTGTTACCCGCCAAGG AACCACCCAAAGACCCTCTGGCCGAGCTGGACCCGATGCAAGCACGGACG TACAAGGAAAAGAAGGAGATTGAACGCCGACAGAAAGCGGGAGACGAACG AGGGTGGAATGCCAGCTATCTCCGTAGTGAGACCGTTGTGGAAGCCGTGG CGGATAGGTTGCAATTGGAAAAGGGCCAGGTTCTGGATAGGGATGGAGGA GAAATGGCAGTCAAGCTGGCGTTAGGCGAGACCTTCCTCTTGGCAGAAAA CAGAGAGTTTTTCAAGAATGAAGGGGTGGATCTGACTGTCCTGGAAAGCG CGGCTGCGCAGCAGGCACGGAGGAAACAGCAGCAGGCAGCAAAAGGAAAC GGAGGAGCAGTGGCGACGGTCTCGAGGAGTAAGACGACGTTGTTGGTGAA GAATCTACCGTATAGTACAACACAGGAAGAGCTGACGCAGCTATTTGGTA GGTTTGGACAGTTGGGGAGGGTGATCTTGCCCCCAAGTCGCACCATAGCG CTGGTGGACTTCTTGGAGGCAGCAGATGCGAAGAAGGCATTCAAAGGATT GGCTTACAAGAGGTTTCAGCATGTACCGCTATATTTGGAGTGGGCACCGA TGCATACCTTTAAGGCGGGGGGGAGTAGGAACAGCGATGTAGAGGTTGGG AAGGAGGTAACTGCTGACGTTGCTGCTCCTGTGGAGACTACACAGCCGCA AAAGGTCAAGAAGATTGCACTAGTGGAGGTGGTGGAGAAGAAAGTGGAGG AGGAAGAGCCCGATGGGTCATTCACGCTCTTCGTAAAAAATCTTAACTTC GCGACGACGGAGGAGAAGCTTTTGGCTTACTTTAAGAGTAAGACTCAGGG GGTTCGGACGGTGGCGATACCCAAAAAGAGTGCTCCTGTAAGTGCGGCGG GCAAGGAGAAGGAGAAATGCAGCAGCAGCAGCAGTGCGGTCTTGTCGATG GGGTATGGTTTCGTGGAGTACAGGAGCGTGGCAGAAGCCAAGGCAGCCCT CAGGGAGATGGAAGGGGCTATGCTAGATGGCCATCGATTGCAGTGCAAGC TATCCGATAAGCGACTGACGGCCCGTCCTCTCACTGCAGCGAAGAACAAG CAAAAGCGTACGAAGCTTGTGGTGCGAAACGTGGCTTTCCAAGCCACTTC GAAAGAGCTGAAGGAATTGTTTGGGAGTTTTGGGAAGGTTAAGACGGTGA GGCTGCCAAAGAAGTTCGATGGGAGTCATAGGGGGTTTGCGTTTGTGGAG TTTTTGACGGCACAGGAAGCGGGGAATGCTTTCGTGGCGTTGTCGTCGAC ACACTTATACGGCAAGAGGTTGGTGTTGGAATGGGCGGAGGATAAGGAGG ACATAGAGACCTTGAGGGAAAAGGCCTCGAAGGACGCGAGGAAGGGGGCG GCGTCGGCGTTGAGCAATGAGGGGGGTGGAGGAGGGGCAGGTGAAGGGAA GAAGAAGTGGGAGAGTGCTTTTGATGAGGGGTTTGATTAAGAAGGATTGG GAGAAATGTTTGAGAATAGAAGAAAGGAAAAGCAGATGGCAAAAGCAAAT AAAGTATCAGACTATTCAATA back to topprotein sequence of jgi.p|Nanoce1779_2|231122 >mRNA_146-protein ID=mRNA_146-protein|Name=jgi.p|Nanoce1779_2|231122|organism=Nannochloropsis oceanica|type=polypeptide|length=940bp MAPDPPAAAPDAGFTRLCVKNVPKHVDERRLKVHFGQQGMVTDAKLLRTK RGESRKMAFVGFRTETEARAALEYFNQTFLDTSRLVVEAAMPRGANTLPR PWSKYSEGSSRFGNNGSGSSSSSSSKRRMADEAEIGEEDDEDNVTVVAAK VKKQRRVSKDEFLATMMPRSQTKFWGNDELLVVPEAHVKMSEQKNQERQG QQRLKVMKGKNGERSSKRNPAGEEELSDDGHQSEEDREEESEEEEDGEEE VDNEEYAPLTLPTPIAGISDLDYLRSKVKKGLEQEMGGGTSTGSRSSSGE TTKKKEEEDVEEKIYEDGSSKNGKHKEEEEEESAGPSGLEEHDDDKESHN TKPLSQPQELPNVEETGRLFLRNLPFSTTEEDLMELLTHHGQVAEVHLPL DDTKRPKGFAFASFLLPEDAARALAAVDGQAFQGRLLHVLPAKEPPKDPL AELDPMQARTYKEKKEIERRQKAGDERGWNASYLRSETVVEAVADRLQLE KGQVLDRDGGEMAVKLALGETFLLAENREFFKNEGVDLTVLESAAAQQAR RKQQQAAKGNGGAVATVSRSKTTLLVKNLPYSTTQEELTQLFGRFGQLGR VILPPSRTIALVDFLEAADAKKAFKGLAYKRFQHVPLYLEWAPMHTFKAG GSRNSDVEVGKEVTADVAAPVETTQPQKVKKIALVEVVEKKVEEEEPDGS FTLFVKNLNFATTEEKLLAYFKSKTQGVRTVAIPKKSAPVSAAGKEKEKC SSSSSAVLSMGYGFVEYRSVAEAKAALREMEGAMLDGHRLQCKLSDKRLT ARPLTAAKNKQKRTKLVVRNVAFQATSKELKELFGSFGKVKTVRLPKKFD GSHRGFAFVEFLTAQEAGNAFVALSSTHLYGKRLVLEWAEDKEDIETLRE KASKDARKGAASALSNEGGGGGAGEGKKKWESAFDEGFD* back to topmRNA from alignment at scaffold_3:378184..381314+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_146 ID=mRNA_146|Name=jgi.p|Nanoce1779_2|231122|organism=Nannochloropsis oceanica|type=mRNA|length=3131bp|location=Sequence derived from alignment at scaffold_3:378184..381314+ (Nannochloropsis oceanica) CCAGATTTGACCTCCCGGCTGTGTCCACCAGCTTGCCGTCACCTTTTATT
TAACAACACACGCCAAGTCCACATTCCCTTCGCATCCCACATAGGTAGTG
TGGAGAGGTATATCTTTTACACGATCACCAGAATCCGGCGGGTGGTATGA
TTTGGCTGGGCTTCCAGAGATGTCTCATCTAGGCTCTTGCCTCCACCCAC
ACCTACACGTACCACAGTAACCCATAAGCAATGGCGCCCGACCCCCCGGC
AGCAGCACCCGACGCAGGATTCACGCGGTTATGTGTCAAAAATGTACCGA
AGCATGTAGACGAGCGCCGGCTCAAGGTGCACTTTGGGCAGCAAGGCATG
GTGACGGATGCCAAACTGCTGCGGACCAAGAGAGGGGAGTCGCGCAAGAT
GGCCTTCGTGGGCTTCCGGACTGAGACCGAGGCGCGTGCAGCGCTGGAAT
ATTTCAATCAGACTTTTCTGGACACGTCAAGATTAGTGGTGGAGGCGGCC
ATGCCGCGAGGGGCTAATACTTTGCCGAGGCCCTGGAGCAAGTACTCAGA
GGGTAGTTCCCGCTTTGGCAACAATGGCAGCGGTAGCAGCAGCAGCAGCA
GTAGCAAGCGACGAATGGCTGACGAGGCAGAGATTGGGGAAGAAGATGAT
GAAGACAATGTCACAGTGGTGGCAGCCAAGGTGAAGAAGCAGCGGCGCGT
GAGCAAGGATGAGTTTTTGGCTACAATGATGCCCCGCTCTCAGACCAAGT
TTTGGGGAAATGACGAGTTGCTCGTCGTACCGGAGGCGCATGTCAAGATG
AGCGAGCAGAAGAATCAGGAGAGACAAGGGCAACAACGGCTAAAAGTCAT
GAAGGGAAAGAATGGGGAGAGGTCAAGCAAGCGCAATCCTGCAGGAGAAG
AGGAGCTGTCCGATGACGGGCATCAGAGTGAGGAGGATAGGGAGGAGGAG
AGTGAGGAAGAGGAGGATGGAGAGGAGGAAGTTGACAACGAGGAATATGC
ACCGTTGACACTGCCGACGCCTATCGCAGGAATTTCGGATCTAGACTATC
TGCGTTCTAAAGTGAAAAAGGGGCTGGAGCAAGAGATGGGGGGGGGCACC
AGTACTGGCAGTAGAAGTAGTAGTGGCGAGACAACGAAGAAGAAGGAAGA
AGAGGATGTAGAAGAGAAAATTTATGAGGATGGAAGTAGCAAAAACGGAA
AACACAAGGAAGAGGAGGAGGAAGAAAGTGCGGGGCCTTCCGGCTTGGAA
GAACATGATGATGACAAGGAGAGTCACAACACCAAGCCTCTCTCCCAACC
CCAAGAGCTACCGAACGTCGAAGAGACAGGCCGGCTCTTCCTCCGAAACC
TTCCCTTCTCCACCACCGAAGAAGACCTAATGGAGTTGCTAACCCACCAC
GGGCAAGTCGCCGAAGTCCACCTTCCCCTCGACGACACTAAGCGGCCCAA
AGGTTTCGCCTTCGCTTCCTTCCTCCTTCCTGAGGATGCCGCACGGGCAC
TCGCCGCCGTTGATGGACAGGCATTTCAAGGGCGATTGTTGCATGTGTTA
CCCGCCAAGGAACCACCCAAAGACCCTCTGGCCGAGCTGGACCCGATGCA
AGCACGGACGTACAAGGAAAAGAAGGAGATTGAACGCCGACAGAAAGCGG
GAGACGAACGAGGGTGGAATGCCAGCTATCTCCGTAGTGAGACCGTTGTG
GAAGCCGTGGCGGATAGGTTGCAATTGGAAAAGGGCCAGGTTCTGGATAG
GGATGGAGGAGAAATGGCAGTCAAGCTGGCGTTAGGCGAGACCTTCCTCT
TGGCAGAAAACAGAGAGTTTTTCAAGAATGAAGGGGTGGATCTGACTGTC
CTGGAAAGCGCGGCTGCGCAGCAGGCACGGAGGAAACAGCAGCAGGCAGC
AAAAGGAAACGGAGGAGCAGTGGCGACGGTCTCGAGGAGTAAGACGACGT
TGTTGGTGAAGAATCTACCGTATAGTACAACACAGGAAGAGCTGACGCAG
CTATTTGGTAGGTTTGGACAGTTGGGGAGGGTGATCTTGCCCCCAAGTCG
CACCATAGCGCTGGTGGACTTCTTGGAGGCAGCAGATGCGAAGAAGGCAT
TCAAAGGATTGGCTTACAAGAGGTTTCAGCATGTACCGCTATATTTGGAG
TGGGCACCGATGCATACCTTTAAGGCGGGGGGGAGTAGGAACAGCGATGT
AGAGGTTGGGAAGGAGGTAACTGCTGACGTTGCTGCTCCTGTGGAGACTA
CACAGCCGCAAAAGGTCAAGAAGATTGCACTAGTGGAGGTGGTGGAGAAG
AAAGTGGAGGAGGAAGAGCCCGATGGGTCATTCACGCTCTTCGTAAAAAA
TCTTAACTTCGCGACGACGGAGGAGAAGCTTTTGGCTTACTTTAAGAGTA
AGACTCAGGGGGTTCGGACGGTGGCGATACCCAAAAAGAGTGCTCCTGTA
AGTGCGGCGGGCAAGGAGAAGGAGAAATGCAGCAGCAGCAGCAGTGCGGT
CTTGTCGATGGGGTATGGTTTCGTGGAGTACAGGAGCGTGGCAGAAGCCA
AGGCAGCCCTCAGGGAGATGGAAGGGGCTATGCTAGATGGCCATCGATTG
CAGTGCAAGCTATCCGATAAGCGACTGACGGCCCGTCCTCTCACTGCAGC
GAAGAACAAGCAAAAGCGTACGAAGCTTGTGGTGCGAAACGTGGCTTTCC
AAGCCACTTCGAAAGAGCTGAAGGAATTGTTTGGGAGTTTTGGGAAGGTT
AAGACGGTGAGGCTGCCAAAGAAGTTCGATGGGAGTCATAGGGGGTTTGC
GTTTGTGGAGTTTTTGACGGCACAGGAAGCGGGGAATGCTTTCGTGGCGT
TGTCGTCGACACACTTATACGGCAAGAGGTTGGTGTTGGAATGGGCGGAG
GATAAGGAGGACATAGAGACCTTGAGGGAAAAGGCCTCGAAGGACGCGAG
GAAGGGGGCGGCGTCGGCGTTGAGCAATGAGGGGGGTGGAGGAGGGGCAG
GTGAAGGGAAGAAGAAGTGGGAGAGTGCTTTTGATGAGGGGTTTGATTAA
GAAGGATTGGGAGAAATGTTTGAGAATAGAAGAAAGGAAAAGCAGATGGC
AAAAGCAAATAAAGTATCAGACTATTCAATA back to topCoding sequence (CDS) from alignment at scaffold_3:378184..381314+ >mRNA_146 ID=mRNA_146|Name=jgi.p|Nanoce1779_2|231122|organism=Nannochloropsis oceanica|type=CDS|length=2820bp|location=Sequence derived from alignment at scaffold_3:378184..381314+ (Nannochloropsis oceanica) ATGGCGCCCGACCCCCCGGCAGCAGCACCCGACGCAGGATTCACGCGGTT ATGTGTCAAAAATGTACCGAAGCATGTAGACGAGCGCCGGCTCAAGGTGC ACTTTGGGCAGCAAGGCATGGTGACGGATGCCAAACTGCTGCGGACCAAG AGAGGGGAGTCGCGCAAGATGGCCTTCGTGGGCTTCCGGACTGAGACCGA GGCGCGTGCAGCGCTGGAATATTTCAATCAGACTTTTCTGGACACGTCAA GATTAGTGGTGGAGGCGGCCATGCCGCGAGGGGCTAATACTTTGCCGAGG CCCTGGAGCAAGTACTCAGAGGGTAGTTCCCGCTTTGGCAACAATGGCAG CGGTAGCAGCAGCAGCAGCAGTAGCAAGCGACGAATGGCTGACGAGGCAG AGATTGGGGAAGAAGATGATGAAGACAATGTCACAGTGGTGGCAGCCAAG GTGAAGAAGCAGCGGCGCGTGAGCAAGGATGAGTTTTTGGCTACAATGAT GCCCCGCTCTCAGACCAAGTTTTGGGGAAATGACGAGTTGCTCGTCGTAC CGGAGGCGCATGTCAAGATGAGCGAGCAGAAGAATCAGGAGAGACAAGGG CAACAACGGCTAAAAGTCATGAAGGGAAAGAATGGGGAGAGGTCAAGCAA GCGCAATCCTGCAGGAGAAGAGGAGCTGTCCGATGACGGGCATCAGAGTG AGGAGGATAGGGAGGAGGAGAGTGAGGAAGAGGAGGATGGAGAGGAGGAA GTTGACAACGAGGAATATGCACCGTTGACACTGCCGACGCCTATCGCAGG AATTTCGGATCTAGACTATCTGCGTTCTAAAGTGAAAAAGGGGCTGGAGC AAGAGATGGGGGGGGGCACCAGTACTGGCAGTAGAAGTAGTAGTGGCGAG ACAACGAAGAAGAAGGAAGAAGAGGATGTAGAAGAGAAAATTTATGAGGA TGGAAGTAGCAAAAACGGAAAACACAAGGAAGAGGAGGAGGAAGAAAGTG CGGGGCCTTCCGGCTTGGAAGAACATGATGATGACAAGGAGAGTCACAAC ACCAAGCCTCTCTCCCAACCCCAAGAGCTACCGAACGTCGAAGAGACAGG CCGGCTCTTCCTCCGAAACCTTCCCTTCTCCACCACCGAAGAAGACCTAA TGGAGTTGCTAACCCACCACGGGCAAGTCGCCGAAGTCCACCTTCCCCTC GACGACACTAAGCGGCCCAAAGGTTTCGCCTTCGCTTCCTTCCTCCTTCC TGAGGATGCCGCACGGGCACTCGCCGCCGTTGATGGACAGGCATTTCAAG GGCGATTGTTGCATGTGTTACCCGCCAAGGAACCACCCAAAGACCCTCTG GCCGAGCTGGACCCGATGCAAGCACGGACGTACAAGGAAAAGAAGGAGAT TGAACGCCGACAGAAAGCGGGAGACGAACGAGGGTGGAATGCCAGCTATC TCCGTAGTGAGACCGTTGTGGAAGCCGTGGCGGATAGGTTGCAATTGGAA AAGGGCCAGGTTCTGGATAGGGATGGAGGAGAAATGGCAGTCAAGCTGGC GTTAGGCGAGACCTTCCTCTTGGCAGAAAACAGAGAGTTTTTCAAGAATG AAGGGGTGGATCTGACTGTCCTGGAAAGCGCGGCTGCGCAGCAGGCACGG AGGAAACAGCAGCAGGCAGCAAAAGGAAACGGAGGAGCAGTGGCGACGGT CTCGAGGAGTAAGACGACGTTGTTGGTGAAGAATCTACCGTATAGTACAA CACAGGAAGAGCTGACGCAGCTATTTGGTAGGTTTGGACAGTTGGGGAGG GTGATCTTGCCCCCAAGTCGCACCATAGCGCTGGTGGACTTCTTGGAGGC AGCAGATGCGAAGAAGGCATTCAAAGGATTGGCTTACAAGAGGTTTCAGC ATGTACCGCTATATTTGGAGTGGGCACCGATGCATACCTTTAAGGCGGGG GGGAGTAGGAACAGCGATGTAGAGGTTGGGAAGGAGGTAACTGCTGACGT TGCTGCTCCTGTGGAGACTACACAGCCGCAAAAGGTCAAGAAGATTGCAC TAGTGGAGGTGGTGGAGAAGAAAGTGGAGGAGGAAGAGCCCGATGGGTCA TTCACGCTCTTCGTAAAAAATCTTAACTTCGCGACGACGGAGGAGAAGCT TTTGGCTTACTTTAAGAGTAAGACTCAGGGGGTTCGGACGGTGGCGATAC CCAAAAAGAGTGCTCCTGTAAGTGCGGCGGGCAAGGAGAAGGAGAAATGC AGCAGCAGCAGCAGTGCGGTCTTGTCGATGGGGTATGGTTTCGTGGAGTA CAGGAGCGTGGCAGAAGCCAAGGCAGCCCTCAGGGAGATGGAAGGGGCTA TGCTAGATGGCCATCGATTGCAGTGCAAGCTATCCGATAAGCGACTGACG GCCCGTCCTCTCACTGCAGCGAAGAACAAGCAAAAGCGTACGAAGCTTGT GGTGCGAAACGTGGCTTTCCAAGCCACTTCGAAAGAGCTGAAGGAATTGT TTGGGAGTTTTGGGAAGGTTAAGACGGTGAGGCTGCCAAAGAAGTTCGAT GGGAGTCATAGGGGGTTTGCGTTTGTGGAGTTTTTGACGGCACAGGAAGC GGGGAATGCTTTCGTGGCGTTGTCGTCGACACACTTATACGGCAAGAGGT TGGTGTTGGAATGGGCGGAGGATAAGGAGGACATAGAGACCTTGAGGGAA AAGGCCTCGAAGGACGCGAGGAAGGGGGCGGCGTCGGCGTTGAGCAATGA GGGGGGTGGAGGAGGGGCAGGTGAAGGGAAGAAGAAGTGGGAGAGTGCTT TTGATGAGGGGTTTGATTAA back to top
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