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Properties
| Property Name | Value |
|---|
| TranscriptId | 572150 |
| Track | FilteredModels2 |
| ProteinId | 572064 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:529564..531044 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1429 ID=mRNA_1429|Name=jgi.p|Nanoce1779_2|572064|organism=Nannochloropsis oceanica|type=mRNA|length=1481bp
GAGAAGGGTCCTTCCTCAGAGCCCTCTCCCTGCTGGGCGGCGAGTCAGAG
CAGCAGCACCAGCACCAGCAGTACCAGCACCAGCAGCACCAGCACCAGTT
TCTACTGCCTTCCAATTCCTTAAGTGGTGTCAGTAGTCTTACGTCCCCCG
CGCTTCGTTGCGGTGGGGTTTATTCACGCCCCGCTCCCGATGCCGAGCTA
GTCTACCAAAAGCAGCAGCAGCAGCAGCATCAGTCATACCACAAGCTATA
TCCCACGTCTCCCTCACCTGTCGTTGCTTCATCTCCACCTTCAACGTCGC
CTGGTACCCATTCCTTCATGCAATCCTCTTCCTCGCGGTCCTTGTCAGGT
GGACATTCTAGTGCTCGCACGGGCGGCGCTGTGCCTCACTCTTCCTTCCC
TCACTACCACCAAAATGGCGGAAGGATAAAAAGAGACATCCCACTTTCTG
GTGCTAAATATGCTGCTGCTGCTGCTTTATCTTCTCTTGTTTCTCCTTGG
GCTTCTCTTGCAATGCATATTCAGGAGGCGCGTGAAATTGCGGATCTGTG
TCAAGCCAATGCTGAAATCATGGACCATTACGGACACCCCGCACAGCGCG
CCCAAGAGCTGGTAAAGCTGTGGTCGATGCTCTTTATCTCAACATCAGCT
TGTCTAGACGCGTTATGCACGGAAGCCACGAGAATAGTAAGAACAGCAGC
GGCGGGACAATTGGCACCTGCTTTATCGTCAGAAGCATTGCGACCTTGGA
GGGATGGGCCGCTAGGCCGGCCATTTGTGGCCAAATTATTGGCGGCGTAT
GAAAGAGAAGGGGATGTTCAAACCCTCGCAACGATTGTGTGTGTATTGAA
AGTGCGACATCCATATTCATTGCTGTTGGAGAGCAAGCGCGAGGAGTATG
ATGGATACTTGAGGGCGTATGCCGAGTTGCTTTATCGTTGGGGGGCACTC
GAGACAAGGACAGAGGTCCTGAAACGACTGTCCTCCTCCTCGGTTTATAT
CGATGTGTCGTCGCCCAAAACGTATAATACTTCTTCTAGGCCTGGAGCAA
CGGTGTTAGACAAAGGAATGGTGGTCGCCGTGAGGTGCGAGGAGTGCGGG
AGCGCGGTGGAAGGGGTGGAACCAGAGAAAGGGGTGTGTAAACATTGCAA
AGCCTTTGCTTTTCGCTGCGTTGTCTGTCAGTTAGCAGTACGAGGCCAAA
GCATGTTTTGTCTCCAGTGTTCCCATGGTGGGCACACGCCGCATATGTGC
GAGTGGTTTTCTGAGAACGATGTGTGCCCGAGTGGGTGTGGCTGTCGGTG
CATCTTTGGGCAGAGCGAGGAAATCAAGGTTGGTGGAGCTGGAAAAGGAG
CTTTGGCGCCTGTCAGTGACAGGTGAGGGTGGGCGTGAAATGCAGCTTGT
CGCAAAACAGATCGTTGATATCATGCACAGGAAAAGAAAAGGGGCGAAAA
AGAATGAAGACTAAAATAGACATTGCGTGAG back to topprotein sequence of jgi.p|Nanoce1779_2|572064 >mRNA_1429-protein ID=mRNA_1429-protein|Name=jgi.p|Nanoce1779_2|572064|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MQSSSSRSLSGGHSSARTGGAVPHSSFPHYHQNGGRIKRDIPLSGAKYAA
AAALSSLVSPWASLAMHIQEAREIADLCQANAEIMDHYGHPAQRAQELVK
LWSMLFISTSACLDALCTEATRIVRTAAAGQLAPALSSEALRPWRDGPLG
RPFVAKLLAAYEREGDVQTLATIVCVLKVRHPYSLLLESKREEYDGYLRA
YAELLYRWGALETRTEVLKRLSSSSVYIDVSSPKTYNTSSRPGATVLDKG
MVVAVRCEECGSAVEGVEPEKGVCKHCKAFAFRCVVCQLAVRGQSMFCLQ
CSHGGHTPHMCEWFSENDVCPSGCGCRCIFGQSEEIKVGGAGKGALAPVS
DR* back to topmRNA from alignment at scaffold_1:529564..531044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1429 ID=mRNA_1429|Name=jgi.p|Nanoce1779_2|572064|organism=Nannochloropsis oceanica|type=mRNA|length=1481bp|location=Sequence derived from alignment at scaffold_1:529564..531044- (Nannochloropsis oceanica)
GAGAAGGGTCCTTCCTCAGAGCCCTCTCCCTGCTGGGCGGCGAGTCAGAG
CAGCAGCACCAGCACCAGCAGTACCAGCACCAGCAGCACCAGCACCAGTT
TCTACTGCCTTCCAATTCCTTAAGTGGTGTCAGTAGTCTTACGTCCCCCG
CGCTTCGTTGCGGTGGGGTTTATTCACGCCCCGCTCCCGATGCCGAGCTA
GTCTACCAAAAGCAGCAGCAGCAGCAGCATCAGTCATACCACAAGCTATA
TCCCACGTCTCCCTCACCTGTCGTTGCTTCATCTCCACCTTCAACGTCGC
CTGGTACCCATTCCTTCATGCAATCCTCTTCCTCGCGGTCCTTGTCAGGT
GGACATTCTAGTGCTCGCACGGGCGGCGCTGTGCCTCACTCTTCCTTCCC
TCACTACCACCAAAATGGCGGAAGGATAAAAAGAGACATCCCACTTTCTG
GTGCTAAATATGCTGCTGCTGCTGCTTTATCTTCTCTTGTTTCTCCTTGG
GCTTCTCTTGCAATGCATATTCAGGAGGCGCGTGAAATTGCGGATCTGTG
TCAAGCCAATGCTGAAATCATGGACCATTACGGACACCCCGCACAGCGCG
CCCAAGAGCTGGTAAAGCTGTGGTCGATGCTCTTTATCTCAACATCAGCT
TGTCTAGACGCGTTATGCACGGAAGCCACGAGAATAGTAAGAACAGCAGC
GGCGGGACAATTGGCACCTGCTTTATCGTCAGAAGCATTGCGACCTTGGA
GGGATGGGCCGCTAGGCCGGCCATTTGTGGCCAAATTATTGGCGGCGTAT
GAAAGAGAAGGGGATGTTCAAACCCTCGCAACGATTGTGTGTGTATTGAA
AGTGCGACATCCATATTCATTGCTGTTGGAGAGCAAGCGCGAGGAGTATG
ATGGATACTTGAGGGCGTATGCCGAGTTGCTTTATCGTTGGGGGGCACTC
GAGACAAGGACAGAGGTCCTGAAACGACTGTCCTCCTCCTCGGTTTATAT
CGATGTGTCGTCGCCCAAAACGTATAATACTTCTTCTAGGCCTGGAGCAA
CGGTGTTAGACAAAGGAATGGTGGTCGCCGTGAGGTGCGAGGAGTGCGGG
AGCGCGGTGGAAGGGGTGGAACCAGAGAAAGGGGTGTGTAAACATTGCAA
AGCCTTTGCTTTTCGCTGCGTTGTCTGTCAGTTAGCAGTACGAGGCCAAA
GCATGTTTTGTCTCCAGTGTTCCCATGGTGGGCACACGCCGCATATGTGC
GAGTGGTTTTCTGAGAACGATGTGTGCCCGAGTGGGTGTGGCTGTCGGTG
CATCTTTGGGCAGAGCGAGGAAATCAAGGTTGGTGGAGCTGGAAAAGGAG
CTTTGGCGCCTGTCAGTGACAGGTGAGGGTGGGCGTGAAATGCAGCTTGT
CGCAAAACAGATCGTTGATATCATGCACAGGAAAAGAAAAGGGGCGAAAA
AGAATGAAGACTAAAATAGACATTGCGTGAG back to topCoding sequence (CDS) from alignment at scaffold_1:529564..531044- >mRNA_1429 ID=mRNA_1429|Name=jgi.p|Nanoce1779_2|572064|organism=Nannochloropsis oceanica|type=CDS|length=1059bp|location=Sequence derived from alignment at scaffold_1:529564..531044- (Nannochloropsis oceanica)
ATGCAATCCTCTTCCTCGCGGTCCTTGTCAGGTGGACATTCTAGTGCTCG
CACGGGCGGCGCTGTGCCTCACTCTTCCTTCCCTCACTACCACCAAAATG
GCGGAAGGATAAAAAGAGACATCCCACTTTCTGGTGCTAAATATGCTGCT
GCTGCTGCTTTATCTTCTCTTGTTTCTCCTTGGGCTTCTCTTGCAATGCA
TATTCAGGAGGCGCGTGAAATTGCGGATCTGTGTCAAGCCAATGCTGAAA
TCATGGACCATTACGGACACCCCGCACAGCGCGCCCAAGAGCTGGTAAAG
CTGTGGTCGATGCTCTTTATCTCAACATCAGCTTGTCTAGACGCGTTATG
CACGGAAGCCACGAGAATAGTAAGAACAGCAGCGGCGGGACAATTGGCAC
CTGCTTTATCGTCAGAAGCATTGCGACCTTGGAGGGATGGGCCGCTAGGC
CGGCCATTTGTGGCCAAATTATTGGCGGCGTATGAAAGAGAAGGGGATGT
TCAAACCCTCGCAACGATTGTGTGTGTATTGAAAGTGCGACATCCATATT
CATTGCTGTTGGAGAGCAAGCGCGAGGAGTATGATGGATACTTGAGGGCG
TATGCCGAGTTGCTTTATCGTTGGGGGGCACTCGAGACAAGGACAGAGGT
CCTGAAACGACTGTCCTCCTCCTCGGTTTATATCGATGTGTCGTCGCCCA
AAACGTATAATACTTCTTCTAGGCCTGGAGCAACGGTGTTAGACAAAGGA
ATGGTGGTCGCCGTGAGGTGCGAGGAGTGCGGGAGCGCGGTGGAAGGGGT
GGAACCAGAGAAAGGGGTGTGTAAACATTGCAAAGCCTTTGCTTTTCGCT
GCGTTGTCTGTCAGTTAGCAGTACGAGGCCAAAGCATGTTTTGTCTCCAG
TGTTCCCATGGTGGGCACACGCCGCATATGTGCGAGTGGTTTTCTGAGAA
CGATGTGTGCCCGAGTGGGTGTGGCTGTCGGTGCATCTTTGGGCAGAGCG
AGGAAATCAAGGTTGGTGGAGCTGGAAAAGGAGCTTTGGCGCCTGTCAGT
GACAGGTGA back to top
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