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Properties
| Property Name | Value |
|---|
| TranscriptId | 572118 |
| Track | FilteredModels2 |
| ProteinId | 572032 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:507123..508353 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1419 ID=mRNA_1419|Name=jgi.p|Nanoce1779_2|572032|organism=Nannochloropsis oceanica|type=mRNA|length=1020bp
CAGACGTAAAAAGACAGGGGTACGTCTCCACTGCTTCTCCCGCTTACGAT
TCTAACCCGCACGCCCGCACCATGACGACCCGTGCCCGAGAAATCAAACT
CGTCCTCCTTGGGGACTCTGGCGTCGGTAAAAGCTCCCTCGTTCTGCGAT
TCGTCACTCAATCCTTCAAACCCTACTCGGAGAGCACTATTGGGGCCAGC
TTCATGAGCAAAGTGGTTGAATTGGACGGACAGACGGTCAAGGTGCAGAT
TTGGGACACCGCCGGACAGGAGAAATACCACAGTCTGGCACCTATGTACT
ACCGGGGGGCGGCGGCGGCGGTTGTAGTATACGATTTGACAAGGGCGGAA
AGCTTTGCCACCCTCCAACGTTGGGTCAGCGAGCTCCGCGAACGAAACCC
GAAGGACATGGAAATTATGATTGCCGGCAACAAGAACGACCTGGAGTCCG
AGCGTCAAGTCGCTCGAAGCGATGCGGAGGTATACGCCAAAAGCATTGGG
GCCGGGTATGTGGAGACATCGGCAAAGGACGACGTGGGGGTGCGTGACTT
GTTCTTGTCGTTGTGCCGCAAGGTCCCTGGGCCCATGCCCTCGACGGGGG
AAACGGCGCGAGGAGGGATTTATCTGGCCTCGGAGACACAGGGAGAGAAG
GAGAGAAAGGGGACGTGTTGTTAGGAGTGGCAAGGAGGGGAGGGGGCGGG
GAGGAAGTGTGGAAAAGCAACGTGTATATAGCCGTAGAGTTTGAATTGAT
TTGGTGCGCGTGGTTGTTATGATCATGGTGTTGGTTGGGCACGTCCCATT
TCCTGGTCATGTATACATATAGATATATATGTATATATACAGATTTCTAT
AAACGGTACTGATGCTTAGTCATCGATGGTTTGTGTGTGAGTGTAGCTGG
GAAAGTGGGGGGAAGAGGGAGAGAAAGTGTGGAAAGAAACAAGGAGACAG
AAAAAGAGAAATCGGGAGATGTCTCTCCTTCCCTCTCTTCATTTGTCGCA
TGCATACACACATACATTAT back to topprotein sequence of jgi.p|Nanoce1779_2|572032 >mRNA_1419-protein ID=mRNA_1419-protein|Name=jgi.p|Nanoce1779_2|572032|organism=Nannochloropsis oceanica|type=polypeptide|length=201bp
MTTRAREIKLVLLGDSGVGKSSLVLRFVTQSFKPYSESTIGASFMSKVVE
LDGQTVKVQIWDTAGQEKYHSLAPMYYRGAAAAVVVYDLTRAESFATLQR
WVSELRERNPKDMEIMIAGNKNDLESERQVARSDAEVYAKSIGAGYVETS
AKDDVGVRDLFLSLCRKVPGPMPSTGETARGGIYLASETQGEKERKGTCC
* back to topmRNA from alignment at scaffold_1:507123..508353- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1419 ID=mRNA_1419|Name=jgi.p|Nanoce1779_2|572032|organism=Nannochloropsis oceanica|type=mRNA|length=1231bp|location=Sequence derived from alignment at scaffold_1:507123..508353- (Nannochloropsis oceanica)
CAGACGTAAAAAGACAGGGGTACGTCTCCACTGCTTCTCCCGCTTACGAT
TCTAACCCGCACGCCCGCACCATGACGACCCGTGCCCGAGAAATCAAACT
CGTCCTCCTTGGGGACTCTGGCGTCGGTAAAAGCTCCCTCGTTCTGCGAT
TCGTCACTCAATCCTTCAAACCCTACTCGGAGAGCACTATTGGGGCCAGC
TTCATGAGCAAAGTGGTTGAATTGGACGGACAGACGGTCAAGGTAGACCT
AAAAAGGGAGGGATCCTTACAGTGAGAAAGATATGCACGTCTTGTCGTTC
ATTCGCACCAAAAGCTAATCTTTCACTCCTTTTTTGGGTACCACTCCCCT
TCCTTACAGGTGCAGATTTGGGACACCGCCGGACAGGAGAAATACCACAG
TCTGGCACCTATGTACTACCGGGGGGCGGCGGCGGCGGTTGTAGTATACG
ATTTGACAAGGGCGGAAAGGTGAGTGTGTGCGGAGTTTTCAGTAAACCCG
GGATTCATGCATGCAATTACTCATCTCCATCTCTTGCTCCCTCCCTCCCT
CCCCTCTCGACAGCTTTGCCACCCTCCAACGTTGGGTCAGCGAGCTCCGC
GAACGAAACCCGAAGGACATGGAAATTATGATTGCCGGCAACAAGAACGA
CCTGGAGTCCGAGCGTCAAGTCGCTCGAAGCGATGCGGAGGTATACGCCA
AAAGCATTGGGGCCGGGTATGTGGAGACATCGGCAAAGGACGACGTGGGG
GTGCGTGACTTGTTCTTGTCGTTGTGCCGCAAGGTCCCTGGGCCCATGCC
CTCGACGGGGGAAACGGCGCGAGGAGGGATTTATCTGGCCTCGGAGACAC
AGGGAGAGAAGGAGAGAAAGGGGACGTGTTGTTAGGAGTGGCAAGGAGGG
GAGGGGGCGGGGAGGAAGTGTGGAAAAGCAACGTGTATATAGCCGTAGAG
TTTGAATTGATTTGGTGCGCGTGGTTGTTATGATCATGGTGTTGGTTGGG
CACGTCCCATTTCCTGGTCATGTATACATATAGATATATATGTATATATA
CAGATTTCTATAAACGGTACTGATGCTTAGTCATCGATGGTTTGTGTGTG
AGTGTAGCTGGGAAAGTGGGGGGAAGAGGGAGAGAAAGTGTGGAAAGAAA
CAAGGAGACAGAAAAAGAGAAATCGGGAGATGTCTCTCCTTCCCTCTCTT
CATTTGTCGCATGCATACACACATACATTAT back to topCoding sequence (CDS) from alignment at scaffold_1:507123..508353- >mRNA_1419 ID=mRNA_1419|Name=jgi.p|Nanoce1779_2|572032|organism=Nannochloropsis oceanica|type=CDS|length=1809bp|location=Sequence derived from alignment at scaffold_1:507123..508353- (Nannochloropsis oceanica)
CTTTGCCACCCTCCAACGTTGGGTCAGCGAGCTCCGCGAACGAAACCCGA
AGGACATGGAAATTATGATTGCCGGCAACAAGAACGACCTGGAGTCCGAG
CGTCAAGTCGCTCGAAGCGATGCGGAGGTATACGCCAAAAGCATTGGGGC
CGGGTATGTGGAGACATCGGCAAAGGACGACGTGGGGGTGCGTGACTTGT
TCTTGTCGTTGTGCCGCAAGGTCCCTGGGCCCATGCCCTCGACGGGGGAA
ACGGCGCGAGGAGGGATTTATCTGGCCTCGGAGACACAGGGAGAGAAGGA
GAGAAAGGGGACGTGTTGTTAGGTGCAGATTTGGGACACCGCCGGACAGG
AGAAATACCACAGTCTGGCACCTATGTACTACCGGGGGGCGGCGGCGGCG
GTTGTAGTATACGATTTGACAAGGGCGGAAAGATGACGACCCGTGCCCGA
GAAATCAAACTCGTCCTCCTTGGGGACTCTGGCGTCGGTAAAAGCTCCCT
CGTTCTGCGATTCGTCACTCAATCCTTCAAACCCTACTCGGAGAGCACTA
TTGGGGCCAGCTTCATGAGCAAAGTGGTTGAATTGGACGGACAGACGGTC
AAGCTTTGCCACCCTCCAACGTTGGGTCAGCGAGCTCCGCGAACGAAACC
CGAAGGACATGGAAATTATGATTGCCGGCAACAAGAACGACCTGGAGTCC
GAGCGTCAAGTCGCTCGAAGCGATGCGGAGGTATACGCCAAAAGCATTGG
GGCCGGGTATGTGGAGACATCGGCAAAGGACGACGTGGGGGTGCGTGACT
TGTTCTTGTCGTTGTGCCGCAAGGTCCCTGGGCCCATGCCCTCGACGGGG
GAAACGGCGCGAGGAGGGATTTATCTGGCCTCGGAGACACAGGGAGAGAA
GGAGAGAAAGGGGACGTGTTGTTAGGTGCAGATTTGGGACACCGCCGGAC
AGGAGAAATACCACAGTCTGGCACCTATGTACTACCGGGGGGCGGCGGCG
GCGGTTGTAGTATACGATTTGACAAGGGCGGAAAGATGACGACCCGTGCC
CGAGAAATCAAACTCGTCCTCCTTGGGGACTCTGGCGTCGGTAAAAGCTC
CCTCGTTCTGCGATTCGTCACTCAATCCTTCAAACCCTACTCGGAGAGCA
CTATTGGGGCCAGCTTCATGAGCAAAGTGGTTGAATTGGACGGACAGACG
GTCAAGCTTTGCCACCCTCCAACGTTGGGTCAGCGAGCTCCGCGAACGAA
ACCCGAAGGACATGGAAATTATGATTGCCGGCAACAAGAACGACCTGGAG
TCCGAGCGTCAAGTCGCTCGAAGCGATGCGGAGGTATACGCCAAAAGCAT
TGGGGCCGGGTATGTGGAGACATCGGCAAAGGACGACGTGGGGGTGCGTG
ACTTGTTCTTGTCGTTGTGCCGCAAGGTCCCTGGGCCCATGCCCTCGACG
GGGGAAACGGCGCGAGGAGGGATTTATCTGGCCTCGGAGACACAGGGAGA
GAAGGAGAGAAAGGGGACGTGTTGTTAGGTGCAGATTTGGGACACCGCCG
GACAGGAGAAATACCACAGTCTGGCACCTATGTACTACCGGGGGGCGGCG
GCGGCGGTTGTAGTATACGATTTGACAAGGGCGGAAAGATGACGACCCGT
GCCCGAGAAATCAAACTCGTCCTCCTTGGGGACTCTGGCGTCGGTAAAAG
CTCCCTCGTTCTGCGATTCGTCACTCAATCCTTCAAACCCTACTCGGAGA
GCACTATTGGGGCCAGCTTCATGAGCAAAGTGGTTGAATTGGACGGACAG
ACGGTCAAG back to top
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