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Properties
Property Name | Value |
TranscriptId | 521945 |
Track | FilteredModels2 |
ProteinId | 521859 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:469224..471543 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1401 ID=mRNA_1401|Name=jgi.p|Nanoce1779_2|521859|organism=Nannochloropsis oceanica|type=mRNA|length=2292bp ATGCGTCTTTATCCATTGGGGAGCTACACGGGGCCTAAGCCTGTGAGCCA GCGTGTGCTAGCCGAGAAGAGGCAACGGGCCCAAGAAGCGCGGGATAGGG AGGCGGCTCGACGCTTGAAGGAGGTCTCATTTGTGCAGCCGACGCTGCCA TCGGTAGTGGGGACGACGAGATCAGGTCGTGCGGTGAGGTCGGTAAATGC GACGATAAATAGTGCAGGACCTGTGTCTAAAAGAGCGAAGAAGGGGGATG GAAAGAAAAAGAAGCAATGTGCCCATGGGGAGGAAGACGAAGGGGGAAAG AAAGAGGGAGAAAAGGAGGAGGAAGCGGAGAGGGAGCAGCAACAGGGTAA TCACATTGACACAGGCGGGAACGATCAGAACGATTGGGTGTGCGGGACGT GTGAGGAGATGGAGAGGTCGGAGGGCGACCGGCTGGTGCTCTGTGATGGA CTCTGTAAGCGTTCGTTCCACCAATCCTGCCTTGGACTCTCATCGGAAGA AGTCGAGGCGCTCGAGACATGGCTCTGCGACCAGTGTCTAGAGAAAGAGC ACACGTGTTTTGTGTGCGGAGACACAGGGAAAGATGACGGGGCGGTGGAC GGTGTGCACAAGTGCATGAAAGGGAGTTGTGGCAAGTTTTACCATGCCCA CTGTGTGAGTCAGTTGCCCAACACCGTCGTCTCCAAGCAGCAGCAGGAGC AGCTGCTGCAGCAGCATTATGATCATCAGGAAGGGGGAAAGGAAGAGGGG GCTGGCGAGGTAAAATTCAAATTTATTTGCCCGATGCACGTATGTGACTT GTGTGGAAAAGGGCGTGAGAGTGGGGTAAATCGGCGAGAGCTGTATCCCT GCTGGATGTGCCCAAAGGCTTACCATTTGAATTGCATCCCTCCCTCGTGC AAATATCACGAATATTTGCTGCTTTGTCCGGAGCACAGTGAGGAGATGGA TTTGCCGCGCTTGCCCGGGTGGGGGGAGGAGGAGGGGGAGGAGGAAGCTC TCGTGGGGGATGGGCGGTGCCGAGGGATGGAAGGATGGGAGGAAAAGGGT GAGAGAAGCGAAGGGTGGCTGTCGTTGGTATTGTGCTCGTTGTTGCCGAA AGGAGGGAGGTCCTGTCGGCCGTTTCGCTTACCGGTGGGGCTGTTTGATG AGGTGAACAGCAAGCCAAGGCCCTATGGACAGATTCCCTGCCTGAAGTAT CTGTGCAAGATGCCTACCAGAGAACCGGGACCTGAGTGTCAGTGTGTGAG AGAGTGTGGGGAAGGCTGTTTGAATCGGATGCTGCATATCGAGTGTGTTG GGGAAGGAAAGAAGGACCGGTACCATAATTGTAATGTTGGCCCGGCGTGT GGGAATAGGGCGTTTAAAAACAAGGAGTACATCAAGCATCAGATTTTTAA GGAAGGCGGGTGTGGGTGGGGGTTGAAGACGTTGGAAGATGTGCGAAAGG GGCAGTTGGTGTTTGAGTATGTTGGGGAGGTGATCGATGAGGAACTGCTC GAGGCACGGTTGCAGGAGCATGCGAGGGAGCACCCGAACGACCATAACAT GTATATTATGGAGTTGGAGAAGGGGTTTTATCTCGATGCGAGGACCAAGG GGAATGCCTCCCGATTCATCAATCACGCATGTGCTCCTAATTGCGAGCTG CAAAAATGGACTGTGAAGGGCGTGACGCACATTGGGATCATGGCGGTGTG TGACATTCGGGCCGGTACTCCCCTGTCGTATGACTACCAGTTCGCGACGA ACGAAGAAGGGAAATTCGCATGCCATTGCGGTGCGCCTACTTGCAGGGGC ACTTTGGCACCGAAAGAGAATTTGACGGAGGATGAGGAGATGGAGGCCTT GCGAACCGGATCCAGGACGGACCGTAAGAAGTTGTTGGAATTATGCAAGA AGAGGGAGAGGCGGGAGATGGCACGGAAAGAACAGGCGGAGAAGGAGAGT GCTAAAAGGAGAAATTTGACGTCGCAGTACTTGCCGGGGGATGCCTTGTT GGAGATCCGTGCGGGTCCACCGGCGAGGTTTTTTCGTTTTGCTAAGGTGA GGGCGGGAGAGGGAGAGGAAGGAAGGGAGGCAGAGGAAGGAGGGGAGGGC GGAATGGATTATTTGGTTGAGGATTTGGTGCGTGTTGGTATGTGCTCTTG TTCGATAGTTGTAGTGTCGGATACTGGAGGTCCCGCTGCTGAACAATTTT TCCCTCTTTTAAATCCCTGTTCTCCTTATTCCTCAATTTGTTTGTATATT TATCTTTGCATATACATATATAGGATACGAAGGTCTTTCTGA back to topprotein sequence of jgi.p|Nanoce1779_2|521859 >mRNA_1401-protein ID=mRNA_1401-protein|Name=jgi.p|Nanoce1779_2|521859|organism=Nannochloropsis oceanica|type=polypeptide|length=764bp MRLYPLGSYTGPKPVSQRVLAEKRQRAQEARDREAARRLKEVSFVQPTLP SVVGTTRSGRAVRSVNATINSAGPVSKRAKKGDGKKKKQCAHGEEDEGGK KEGEKEEEAEREQQQGNHIDTGGNDQNDWVCGTCEEMERSEGDRLVLCDG LCKRSFHQSCLGLSSEEVEALETWLCDQCLEKEHTCFVCGDTGKDDGAVD GVHKCMKGSCGKFYHAHCVSQLPNTVVSKQQQEQLLQQHYDHQEGGKEEG AGEVKFKFICPMHVCDLCGKGRESGVNRRELYPCWMCPKAYHLNCIPPSC KYHEYLLLCPEHSEEMDLPRLPGWGEEEGEEEALVGDGRCRGMEGWEEKG ERSEGWLSLVLCSLLPKGGRSCRPFRLPVGLFDEVNSKPRPYGQIPCLKY LCKMPTREPGPECQCVRECGEGCLNRMLHIECVGEGKKDRYHNCNVGPAC GNRAFKNKEYIKHQIFKEGGCGWGLKTLEDVRKGQLVFEYVGEVIDEELL EARLQEHAREHPNDHNMYIMELEKGFYLDARTKGNASRFINHACAPNCEL QKWTVKGVTHIGIMAVCDIRAGTPLSYDYQFATNEEGKFACHCGAPTCRG TLAPKENLTEDEEMEALRTGSRTDRKKLLELCKKRERREMARKEQAEKES AKRRNLTSQYLPGDALLEIRAGPPARFFRFAKVRAGEGEEGREAEEGGEG GMDYLVEDLVRVGMCSCSIVVVSDTGGPAAEQFFPLLNPCSPYSSICLYI YLCIYIYRIRRSF* back to topmRNA from alignment at scaffold_1:469224..471543+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1401 ID=mRNA_1401|Name=jgi.p|Nanoce1779_2|521859|organism=Nannochloropsis oceanica|type=mRNA|length=2320bp|location=Sequence derived from alignment at scaffold_1:469224..471543+ (Nannochloropsis oceanica) ATGCGTCTTTATCCATTGGGGAGCTACACGGGGCCTAAGCCTGTGAGCCA
GCGTGTGCTAGCCGAGAAGAGGCAACGGGCCCAAGAAGCGCGGGATAGGG
AGGCGGCTCGACGCTTGAAGGAGGTCTCATTTGTGCAGCCGACGCTGCCA
TCGGTAGTGGGGACGACGAGATCAGGTCGTGCGGTGAGGTCGGTAAATGC
GACGATAAATAGTGCAGGACCTGTGTCTAAAAGAGCGAAGAAGGGGGATG
GAAAGAAAAAGAAGCAATGTGCCCATGGGGAGGAAGACGAAGGGGGAAAG
AAAGAGGGAGAAAAGGAGGAGGAAGCGGAGAGGGAGCAGCAACAGGGTAA
TCACATTGACACAGGCGGGAACGATCAGAACGATTGGGTGTGCGGGACGT
GTGAGGAGATGGAGAGGTCGGAGGGCGACCGGCTGGTGCTCTGTGATGGA
CTCTGTAAGCGTTCGTTCCACCAATCCTGCCTTGGACTCTCATCGGAAGA
AGTCGAGGCGCTCGAGACATGGCTCTGCGACCAGTGTCTAGAGAAAGAGC
ACACGTGTTTTGTGTGCGGAGACACAGGGAAAGATGACGGGGCGGTGGAC
GGTGTGCACAAGTGCATGAAAGGGAGTTGTGGCAAGTTTTACCATGCCCA
CTGTGTGAGTCAGTTGCCCAACACCGTCGTCTCCAAGCAGCAGCAGGAGC
AGCTGCTGCAGCAGCATTATGATCATCAGGAAGGGGGAAAGGAAGAGGGG
GCTGGCGAGGTAAAATTCAAATTTATTTGCCCGATGCACGTATGTGACTT
GTGTGGAAAAGGGCGTGAGAGTGGGGTAAATCGGCGAGAGCTGTATCCCT
GCTGGATGTGCCCAAAGGCTTACCATTTGAATTGCATCCCTCCCTCGTGC
AAATATCACGAATATTTGCTGCTTTGTCCGGAGCACAGTGAGGAGATGGA
TTTGCCGCGCTTGCCCGGGTGGGGGGAGGAGGAGGGGGAGGAGGAAGCTC
TCGTGGGGGATGGGCGGTGCCGAGGGATGGAAGGATGGGAGGAAAAGGGT
GAGAGAAGCGAAGGGTGGCTGTCGTTGGTATTGTGCTCGTTGTTGCCGAA
AGGAGGGAGGTCCTGTCGGCCGTTTCGCTTACCGGTGGGGCTGTTTGATG
AGGTGAACAGCAAGCCAAGGCCCTATGGACAGATTCCCTGCCTGAAGTAT
CTGTGCAAGATGCCTACCAGAGAACCGGGACCTGAGTGTCAGTGTGTGAG
AGAGTGTGGGGAAGGCTGTTTGAATCGGATGCTGCATATCGAGTGTGTTG
GGGTGGGGGGGGGGGGAGCATGGGGGGGAGGAAGGAAAGAAGGACCGGTA
CCATAATTGTAATGTTGGCCCGGCGTGTGGGAATAGGGCGTTTAAAAACA
AGGAGTACATCAAGCATCAGATTTTTAAGGAAGGCGGGTGTGGGTGGGGG
TTGAAGACGTTGGAAGATGTGCGAAAGGGGCAGTTGGTGTTTGAGTATGT
TGGGGAGGTGATCGATGAGGAACTGCTCGAGGCACGGTTGCAGGAGCATG
CGAGGGAGCACCCGAACGACCATAACATGTATATTATGGAGTTGGAGAAG
GGGTTTTATCTCGATGCGAGGACCAAGGGGAATGCCTCCCGATTCATCAA
TCACGCATGTGCTCCTAATTGCGAGCTGCAAAAATGGACTGTGAAGGGCG
TGACGCACATTGGGATCATGGCGGTGTGTGACATTCGGGCCGGTACTCCC
CTGTCGTATGACTACCAGTTCGCGACGAACGAAGAAGGGAAATTCGCATG
CCATTGCGGTGCGCCTACTTGCAGGGGCACTTTGGCACCGAAAGAGAATT
TGACGGAGGATGAGGAGATGGAGGCCTTGCGAACCGGATCCAGGACGGAC
CGTAAGAAGTTGTTGGAATTATGCAAGAAGAGGGAGAGGCGGGAGATGGC
ACGGAAAGAACAGGCGGAGAAGGAGAGTGCTAAAAGGAGAAATTTGACGT
CGCAGTACTTGCCGGGGGATGCCTTGTTGGAGATCCGTGCGGGTCCACCG
GCGAGGTTTTTTCGTTTTGCTAAGGTGAGGGCGGGAGAGGGAGAGGAAGG
AAGGGAGGCAGAGGAAGGAGGGGAGGGCGGAATGGATTATTTGGTTGAGG
ATTTGGTGCGTGTTGGTATGTGCTCTTGTTCGATAGTTGTAGTGTCGGAT
ACTGGAGGTCCCGCTGCTGAACAATTTTTCCCTCTTTTAAATCCCTGTTC
TCCTTATTCCTCAATTTGTTTGTATATTTATCTTTGCATATACATATATA
GGATACGAAGGTCTTTCTGA back to topCoding sequence (CDS) from alignment at scaffold_1:469224..471543+ >mRNA_1401 ID=mRNA_1401|Name=jgi.p|Nanoce1779_2|521859|organism=Nannochloropsis oceanica|type=CDS|length=4584bp|location=Sequence derived from alignment at scaffold_1:469224..471543+ (Nannochloropsis oceanica) ATGCGTCTTTATCCATTGGGGAGCTACACGGGGCCTAAGCCTGTGAGCCA GCGTGTGCTAGCCGAGAAGAGGCAACGGGCCCAAGAAGCGCGGGATAGGG AGGCGGCTCGACGCTTGAAGGAGGTCTCATTTGTGCAGCCGACGCTGCCA TCGGTAGTGGGGACGACGAGATCAGGTCGTGCGGTGAGGTCGGTAAATGC GACGATAAATAGTGCAGGACCTGTGTCTAAAAGAGCGAAGAAGGGGGATG GAAAGAAAAAGAAGCAATGTGCCCATGGGGAGGAAGACGAAGGGGGAAAG AAAGAGGGAGAAAAGGAGGAGGAAGCGGAGAGGGAGCAGCAACAGGGTAA TCACATTGACACAGGCGGGAACGATCAGAACGATTGGGTGTGCGGGACGT GTGAGGAGATGGAGAGGTCGGAGGGCGACCGGCTGGTGCTCTGTGATGGA CTCTGTAAGCGTTCGTTCCACCAATCCTGCCTTGGACTCTCATCGGAAGA AGTCGAGGCGCTCGAGACATGGCTCTGCGACCAGTGTCTAGAGAAAGAGC ACACGTGTTTTGTGTGCGGAGACACAGGGAAAGATGACGGGGCGGTGGAC GGTGTGCACAAGTGCATGAAAGGGAGTTGTGGCAAGTTTTACCATGCCCA CTGTGTGAGTCAGTTGCCCAACACCGTCGTCTCCAAGCAGCAGCAGGAGC AGCTGCTGCAGCAGCATTATGATCATCAGGAAGGGGGAAAGGAAGAGGGG GCTGGCGAGGTAAAATTCAAATTTATTTGCCCGATGCACGTATGTGACTT GTGTGGAAAAGGGCGTGAGAGTGGGGTAAATCGGCGAGAGCTGTATCCCT GCTGGATGTGCCCAAAGGCTTACCATTTGAATTGCATCCCTCCCTCGTGC AAATATCACGAATATTTGCTGCTTTGTCCGGAGCACAGTGAGGAGATGGA TTTGCCGCGCTTGCCCGGGTGGGGGGAGGAGGAGGGGGAGGAGGAAGCTC TCGTGGGGGATGGGCGGTGCCGAGGGATGGAAGGATGGGAGGAAAAGGGT GAGAGAAGCGAAGGGTGGCTGTCGTTGGTATTGTGCTCGTTGTTGCCGAA AGGAGGGAGGTCCTGTCGGCCGTTTCGCTTACCGGTGGGGCTGTTTGATG AGGTGAACAGCAAGCCAAGGCCCTATGGACAGATTCCCTGCCTGAAGTAT CTGTGCAAGATGCCTACCAGAGAACCGGGACCTGAGTGTCAGTGTGTGAG AGAGTGTGGGGAAGGCTGTTTGAATCGGATGCTGCATATCGAGTGTGTTG GGGAAGGAAAGAAGGACCGGTACCATAATTGTAATGTTGGCCCGGCGTGT GGGAATAGGGCGTTTAAAAACAAGGAGTACATCAAGCATCAGATTTTTAA GGAAGGCGGGTGTGGGTGGGGGTTGAAGACGTTGGAAGATGTGCGAAAGG GGCAGTTGGTGTTTGAGTATGTTGGGGAGGTGATCGATGAGGAACTGCTC GAGGCACGGTTGCAGGAGCATGCGAGGGAGCACCCGAACGACCATAACAT GTATATTATGGAGTTGGAGAAGGGGTTTTATCTCGATGCGAGGACCAAGG GGAATGCCTCCCGATTCATCAATCACGCATGTGCTCCTAATTGCGAGCTG CAAAAATGGACTGTGAAGGGCGTGACGCACATTGGGATCATGGCGGTGTG TGACATTCGGGCCGGTACTCCCCTGTCGTATGACTACCAGTTCGCGACGA ACGAAGAAGGGAAATTCGCATGCCATTGCGGTGCGCCTACTTGCAGGGGC ACTTTGGCACCGAAAGAGAATTTGACGGAGGATGAGGAGATGGAGGCCTT GCGAACCGGATCCAGGACGGACCGTAAGAAGTTGTTGGAATTATGCAAGA AGAGGGAGAGGCGGGAGATGGCACGGAAAGAACAGGCGGAGAAGGAGAGT GCTAAAAGGAGAAATTTGACGTCGCAGTACTTGCCGGGGGATGCCTTGTT GGAGATCCGTGCGGGTCCACCGGCGAGGTTTTTTCGTTTTGCTAAGGTGA GGGCGGGAGAGGGAGAGGAAGGAAGGGAGGCAGAGGAAGGAGGGGAGGGC GGAATGGATTATTTGGTTGAGGATTTGGTGCGTGTTGGTATGTGCTCTTG TTCGATAGTTGTAGTGTCGGATACTGGAGGTCCCGCTGCTGAACAATTTT TCCCTCTTTTAAATCCCTGTTCTCCTTATTCCTCAATTTGTTTGTATATT TATCTTTGCATATACATATATAGGATACGAAGGTCTTTCTGAATGCGTCT TTATCCATTGGGGAGCTACACGGGGCCTAAGCCTGTGAGCCAGCGTGTGC TAGCCGAGAAGAGGCAACGGGCCCAAGAAGCGCGGGATAGGGAGGCGGCT CGACGCTTGAAGGAGGTCTCATTTGTGCAGCCGACGCTGCCATCGGTAGT GGGGACGACGAGATCAGGTCGTGCGGTGAGGTCGGTAAATGCGACGATAA ATAGTGCAGGACCTGTGTCTAAAAGAGCGAAGAAGGGGGATGGAAAGAAA AAGAAGCAATGTGCCCATGGGGAGGAAGACGAAGGGGGAAAGAAAGAGGG AGAAAAGGAGGAGGAAGCGGAGAGGGAGCAGCAACAGGGTAATCACATTG ACACAGGCGGGAACGATCAGAACGATTGGGTGTGCGGGACGTGTGAGGAG ATGGAGAGGTCGGAGGGCGACCGGCTGGTGCTCTGTGATGGACTCTGTAA GCGTTCGTTCCACCAATCCTGCCTTGGACTCTCATCGGAAGAAGTCGAGG CGCTCGAGACATGGCTCTGCGACCAGTGTCTAGAGAAAGAGCACACGTGT TTTGTGTGCGGAGACACAGGGAAAGATGACGGGGCGGTGGACGGTGTGCA CAAGTGCATGAAAGGGAGTTGTGGCAAGTTTTACCATGCCCACTGTGTGA GTCAGTTGCCCAACACCGTCGTCTCCAAGCAGCAGCAGGAGCAGCTGCTG CAGCAGCATTATGATCATCAGGAAGGGGGAAAGGAAGAGGGGGCTGGCGA GGTAAAATTCAAATTTATTTGCCCGATGCACGTATGTGACTTGTGTGGAA AAGGGCGTGAGAGTGGGGTAAATCGGCGAGAGCTGTATCCCTGCTGGATG TGCCCAAAGGCTTACCATTTGAATTGCATCCCTCCCTCGTGCAAATATCA CGAATATTTGCTGCTTTGTCCGGAGCACAGTGAGGAGATGGATTTGCCGC GCTTGCCCGGGTGGGGGGAGGAGGAGGGGGAGGAGGAAGCTCTCGTGGGG GATGGGCGGTGCCGAGGGATGGAAGGATGGGAGGAAAAGGGTGAGAGAAG CGAAGGGTGGCTGTCGTTGGTATTGTGCTCGTTGTTGCCGAAAGGAGGGA GGTCCTGTCGGCCGTTTCGCTTACCGGTGGGGCTGTTTGATGAGGTGAAC AGCAAGCCAAGGCCCTATGGACAGATTCCCTGCCTGAAGTATCTGTGCAA GATGCCTACCAGAGAACCGGGACCTGAGTGTCAGTGTGTGAGAGAGTGTG GGGAAGGCTGTTTGAATCGGATGCTGCATATCGAGTGTGTTGGGGAAGGA AAGAAGGACCGGTACCATAATTGTAATGTTGGCCCGGCGTGTGGGAATAG GGCGTTTAAAAACAAGGAGTACATCAAGCATCAGATTTTTAAGGAAGGCG GGTGTGGGTGGGGGTTGAAGACGTTGGAAGATGTGCGAAAGGGGCAGTTG GTGTTTGAGTATGTTGGGGAGGTGATCGATGAGGAACTGCTCGAGGCACG GTTGCAGGAGCATGCGAGGGAGCACCCGAACGACCATAACATGTATATTA TGGAGTTGGAGAAGGGGTTTTATCTCGATGCGAGGACCAAGGGGAATGCC TCCCGATTCATCAATCACGCATGTGCTCCTAATTGCGAGCTGCAAAAATG GACTGTGAAGGGCGTGACGCACATTGGGATCATGGCGGTGTGTGACATTC GGGCCGGTACTCCCCTGTCGTATGACTACCAGTTCGCGACGAACGAAGAA GGGAAATTCGCATGCCATTGCGGTGCGCCTACTTGCAGGGGCACTTTGGC ACCGAAAGAGAATTTGACGGAGGATGAGGAGATGGAGGCCTTGCGAACCG GATCCAGGACGGACCGTAAGAAGTTGTTGGAATTATGCAAGAAGAGGGAG AGGCGGGAGATGGCACGGAAAGAACAGGCGGAGAAGGAGAGTGCTAAAAG GAGAAATTTGACGTCGCAGTACTTGCCGGGGGATGCCTTGTTGGAGATCC GTGCGGGTCCACCGGCGAGGTTTTTTCGTTTTGCTAAGGTGAGGGCGGGA GAGGGAGAGGAAGGAAGGGAGGCAGAGGAAGGAGGGGAGGGCGGAATGGA TTATTTGGTTGAGGATTTGGTGCGTGTTGGTATGTGCTCTTGTTCGATAG TTGTAGTGTCGGATACTGGAGGTCCCGCTGCTGAACAATTTTTCCCTCTT TTAAATCCCTGTTCTCCTTATTCCTCAATTTGTTTGTATATTTATCTTTG CATATACATATATAGGATACGAAGGTCTTTCTGA back to top
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