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Properties
| Property Name | Value |
|---|
| TranscriptId | 576429 |
| Track | FilteredModels2 |
| ProteinId | 576343 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:360797..363863 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_138 ID=mRNA_138|Name=jgi.p|Nanoce1779_2|576343|organism=Nannochloropsis oceanica|type=mRNA|length=3067bp
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
CTGTTGCTGTTGTTGTTGTTGTGGTGGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGCCGCCATCATTTGGCTCGACTACCTCGA
TGGCCCACTGTTCGTCTTCATAAGGGCGGATCGCGGGGTAAGTAGCAGCA
CGAGGCTTCTTGCACACAAAGCAGCTTGCGCGCTCCTCGTTATCGCAGGA
CTTAGCTTCCCAGGAACCGTCTCGGGCCATTTGAGCACACGTGATAATAC
TAACGTGAGCCGTTGGTTCGAGTGGGGTCTTGGCAGTGATGGGTTCAAGC
GCGGGCTGTGGTGACGGTGAAGGTGAGTGCTGCCAGTTTTCGTAGTATGA
CCAATCGTATTCCTCTCCGTTCAGCAGATTATTCAGGCCAATATATCCTG
GTAAAAAGCCATTGTTAAAGGTCATGCTGTCTTGAAACTGCGCGAGAACC
CATTCGTTCTCCTCCTTGGAATCAATGACTACCAAGCGCCCCCCCAAGGA
ACCACACATTTTTTGAGCACCCACCCAAGACATATTTTGCATCACTTCCC
GGCGGTAGCAAGAGCAGCCGAATTGTAAGTAAAAACCATTATTATCCGTA
CTTGCGGGGTGATCGCTGCCATCGCCATGGCCTATGAGCGGGGGAGAAGG
ACAGGAACAAGATGCGTCGTTCGATCCTACCTCACACAGCACCGCACGGG
ACTTGATCGCAAAGCAGGACGGTGCCACCACGGTCCACGTACCGTCCTCT
GTCATCTCGAAACACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGGGCATCACTCTTATTGCCGGACAGTGTGGATGTCATGTAAGGAC
TGCTGTTGGATCCCGCGAACCAATTATCCACGCCGTCATGCTCGCTGTGC
ATGTACGTGGCATCTATGTTCCAGTAGGTATCCCTGATCCAGCCTTCCAG
GCCGAAGGTATCACGATTGTCACGATGACGCATCAGAAACTCGCTTGGAC
GGCGCCGATGATATCCGATATAACCGCCCCTTTTCCCCATAAGAGAGTGC
ACGAAGGCGTTATCTGCAGCAGAATCGAGCGAAACCAAGTGCCCGCCCAA
TTTTTTCTGACAGTGCGCCCACGCATCCCACCAGGATACGCTGTGTAAGC
GACGGCGAATGTAGCATGAGTCGCTGAAACGTAGCCAGCCGTCTGGACAG
CCCAAATGTGTGAGCCATCCCTTCTTCTGACAGATAAAGGATGTAGCATT
TTGAGGCACATGAAAACAATCAACAGCCGTCCAATTACCCGTCCCATCCA
TCCACCCGCAATCTTTGAGGAGACGCTGATAGAACCCTAAGCTCTGCACA
TAGCCCGTTGTAGGATCTGTGTGCCCGTAAAATCCCACGATAGGGTGGTG
CCAACGCATGCCCTCTAGCCAAAGATCCTTGGTGAATACGTCAGGTCGGT
CATGTAACAGGTTGCCAAACGGTCCGTGCAGCCGGATACTGTCCACATTT
TGGCCGAGAGCCAAGGTATAGAATCCGAGGCTGCGCAATCCCAGCACCCC
AAAAACGGCCTTGATGCCTACGAGCCGCTCCTCGGGCGGCAGCTCCACTG
TAACTTCCCGAGCAGACGATGACACATGCGACAGTGGCACGTGAGTAGGG
TCGCCGGCGGCAGCAGGACGGATAGAACGAAAACCAAATTTGTCGTAACT
TAAATGTATGCGATGAACCCCTTGATCTTCCGTTTTAGCGTCTTCCATTC
CTGCCATCTCATCGAAAAAGTTACGCTCGCTGCTACTATTGGTGCCCTTG
TCCTCGTTAATGGTACTAAGTTGATGCTGTACATCGTAAAACCGACCAAC
CCACGCTGTTTTGACAACGTCATTCTCTTTAATACTGAAAGAGGACAATG
GCGACAGCATTGCGGCGTTTGGCTTTGTCGAGTTTGCCCACTGGTGAAAT
TTTGCTCCGCGGTCCCAGAAGGCCCTTTTATGGTGGCGGCGCTTTCTCGC
TTGGGAATTTCCTTGGTTGAAATCTTGTACACTACCGTTGTGTGCGATGT
GTGTTGGCAGTGGCGAAGGCAAGAGCGCAGTCTGATCCCGAAAGGAGAAA
CTGCCAGCATTGCTCAGTCGGCTCCAAAGATCCACCGCTGATTTCGCGAG
CTGTTTCTGCTGAGAGGCTTCATTCAGGAGTGCTAATCGCCGAACCGGTC
CTGGCCCTTCATCGACGACCACTATCTGCTGCTTTATTCCCATCCAGCCT
TGGCAGCCACTGTGCAGATTTTGAACAAAATTGTTTTCGCCCTCCGAGGT
AATTGTTACCAACTCAGCGTTCCCGGCGTGGCACTTGGCGCAGGCTTCGT
TGTAGGTGGAAGGTTCCGCCCAATGTTGCCGATAGCACCAGCAATCATGG
AGTGTCCAGCCCACTGGGCAGCCATTGCCCACGCTGAGGAACAAGGGTGG
GGCATCAGGCTCCATCCAAGCTTTGCCGCGATGAAGATGGCGGCCGTGCT
CGCCATCGCTGTCTGCATCATCGTGCTTGGTGGGATCATTGTCTCGATTG
ACAGGCGACGGACCGAGGCGTAGCGCAACGTTGTCGCAGAAACCATCTCC
CTCAATCTTTTCTCGAAAGGTTGGACTATTAAAACGGTAGTCGTGGGAAA
GCTGGCGCAAAAGCTGCTTCAAAATATCCATTTCTCCGCTCCAGCTCACG
GTAAAGAAGCGCTCGTCCCGGCTTCCGCAGCAGGTGAAAGCAAAGCATGA
AGCCTTATCCGGATTACAAGGAAGATCGCATTGCCCCGTATCCACGCGAC
GAAAAACAGATGGGTAGTCGTTTCCGCAGAAGCAGCTGTCTGAGAGCCCC
GTGGCCGATAAAGCATACCCGTGATCCGTACAAATTGCCTGGCATCGCTT
ATTGCTGAGGTTCTCACGCCCCAGCTCCACCGCAAACTCCGAATCGAAGC
GGTCGAAACAGCCCTCTACTTTTTCTGTCAGGCCACCTATGGGGCGCTGC
CCGAAGGCGCGTTCCCG back to topprotein sequence of jgi.p|Nanoce1779_2|576343 >mRNA_138-protein ID=mRNA_138-protein|Name=jgi.p|Nanoce1779_2|576343|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MAYERGRRTGTRCVVRSYLTQHRTGLDRKAGRCHHGPRTVLCHLETLLLL
LLLLLLLLLLGITLIAGQCGCHVRTAVGSREPIIHAVMLAVHVRGIYVPV
GIPDPAFQAEGITIVTMTHQKLAWTAPMISDITAPFPHKRVHEGVICSRI
ERNQVPAQFFLTVRPRIPPGYAV* back to topmRNA from alignment at scaffold_3:360797..363863- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_138 ID=mRNA_138|Name=jgi.p|Nanoce1779_2|576343|organism=Nannochloropsis oceanica|type=mRNA|length=3067bp|location=Sequence derived from alignment at scaffold_3:360797..363863- (Nannochloropsis oceanica)
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
CTGTTGCTGTTGTTGTTGTTGTGGTGGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGCCGCCATCATTTGGCTCGACTACCTCGA
TGGCCCACTGTTCGTCTTCATAAGGGCGGATCGCGGGGTAAGTAGCAGCA
CGAGGCTTCTTGCACACAAAGCAGCTTGCGCGCTCCTCGTTATCGCAGGA
CTTAGCTTCCCAGGAACCGTCTCGGGCCATTTGAGCACACGTGATAATAC
TAACGTGAGCCGTTGGTTCGAGTGGGGTCTTGGCAGTGATGGGTTCAAGC
GCGGGCTGTGGTGACGGTGAAGGTGAGTGCTGCCAGTTTTCGTAGTATGA
CCAATCGTATTCCTCTCCGTTCAGCAGATTATTCAGGCCAATATATCCTG
GTAAAAAGCCATTGTTAAAGGTCATGCTGTCTTGAAACTGCGCGAGAACC
CATTCGTTCTCCTCCTTGGAATCAATGACTACCAAGCGCCCCCCCAAGGA
ACCACACATTTTTTGAGCACCCACCCAAGACATATTTTGCATCACTTCCC
GGCGGTAGCAAGAGCAGCCGAATTGTAAGTAAAAACCATTATTATCCGTA
CTTGCGGGGTGATCGCTGCCATCGCCATGGCCTATGAGCGGGGGAGAAGG
ACAGGAACAAGATGCGTCGTTCGATCCTACCTCACACAGCACCGCACGGG
ACTTGATCGCAAAGCAGGACGGTGCCACCACGGTCCACGTACCGTCCTCT
GTCATCTCGAAACACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGGGCATCACTCTTATTGCCGGACAGTGTGGATGTCATGTAAGGAC
TGCTGTTGGATCCCGCGAACCAATTATCCACGCCGTCATGCTCGCTGTGC
ATGTACGTGGCATCTATGTTCCAGTAGGTATCCCTGATCCAGCCTTCCAG
GCCGAAGGTATCACGATTGTCACGATGACGCATCAGAAACTCGCTTGGAC
GGCGCCGATGATATCCGATATAACCGCCCCTTTTCCCCATAAGAGAGTGC
ACGAAGGCGTTATCTGCAGCAGAATCGAGCGAAACCAAGTGCCCGCCCAA
TTTTTTCTGACAGTGCGCCCACGCATCCCACCAGGATACGCTGTGTAAGC
GACGGCGAATGTAGCATGAGTCGCTGAAACGTAGCCAGCCGTCTGGACAG
CCCAAATGTGTGAGCCATCCCTTCTTCTGACAGATAAAGGATGTAGCATT
TTGAGGCACATGAAAACAATCAACAGCCGTCCAATTACCCGTCCCATCCA
TCCACCCGCAATCTTTGAGGAGACGCTGATAGAACCCTAAGCTCTGCACA
TAGCCCGTTGTAGGATCTGTGTGCCCGTAAAATCCCACGATAGGGTGGTG
CCAACGCATGCCCTCTAGCCAAAGATCCTTGGTGAATACGTCAGGTCGGT
CATGTAACAGGTTGCCAAACGGTCCGTGCAGCCGGATACTGTCCACATTT
TGGCCGAGAGCCAAGGTATAGAATCCGAGGCTGCGCAATCCCAGCACCCC
AAAAACGGCCTTGATGCCTACGAGCCGCTCCTCGGGCGGCAGCTCCACTG
TAACTTCCCGAGCAGACGATGACACATGCGACAGTGGCACGTGAGTAGGG
TCGCCGGCGGCAGCAGGACGGATAGAACGAAAACCAAATTTGTCGTAACT
TAAATGTATGCGATGAACCCCTTGATCTTCCGTTTTAGCGTCTTCCATTC
CTGCCATCTCATCGAAAAAGTTACGCTCGCTGCTACTATTGGTGCCCTTG
TCCTCGTTAATGGTACTAAGTTGATGCTGTACATCGTAAAACCGACCAAC
CCACGCTGTTTTGACAACGTCATTCTCTTTAATACTGAAAGAGGACAATG
GCGACAGCATTGCGGCGTTTGGCTTTGTCGAGTTTGCCCACTGGTGAAAT
TTTGCTCCGCGGTCCCAGAAGGCCCTTTTATGGTGGCGGCGCTTTCTCGC
TTGGGAATTTCCTTGGTTGAAATCTTGTACACTACCGTTGTGTGCGATGT
GTGTTGGCAGTGGCGAAGGCAAGAGCGCAGTCTGATCCCGAAAGGAGAAA
CTGCCAGCATTGCTCAGTCGGCTCCAAAGATCCACCGCTGATTTCGCGAG
CTGTTTCTGCTGAGAGGCTTCATTCAGGAGTGCTAATCGCCGAACCGGTC
CTGGCCCTTCATCGACGACCACTATCTGCTGCTTTATTCCCATCCAGCCT
TGGCAGCCACTGTGCAGATTTTGAACAAAATTGTTTTCGCCCTCCGAGGT
AATTGTTACCAACTCAGCGTTCCCGGCGTGGCACTTGGCGCAGGCTTCGT
TGTAGGTGGAAGGTTCCGCCCAATGTTGCCGATAGCACCAGCAATCATGG
AGTGTCCAGCCCACTGGGCAGCCATTGCCCACGCTGAGGAACAAGGGTGG
GGCATCAGGCTCCATCCAAGCTTTGCCGCGATGAAGATGGCGGCCGTGCT
CGCCATCGCTGTCTGCATCATCGTGCTTGGTGGGATCATTGTCTCGATTG
ACAGGCGACGGACCGAGGCGTAGCGCAACGTTGTCGCAGAAACCATCTCC
CTCAATCTTTTCTCGAAAGGTTGGACTATTAAAACGGTAGTCGTGGGAAA
GCTGGCGCAAAAGCTGCTTCAAAATATCCATTTCTCCGCTCCAGCTCACG
GTAAAGAAGCGCTCGTCCCGGCTTCCGCAGCAGGTGAAAGCAAAGCATGA
AGCCTTATCCGGATTACAAGGAAGATCGCATTGCCCCGTATCCACGCGAC
GAAAAACAGATGGGTAGTCGTTTCCGCAGAAGCAGCTGTCTGAGAGCCCC
GTGGCCGATAAAGCATACCCGTGATCCGTACAAATTGCCTGGCATCGCTT
ATTGCTGAGGTTCTCACGCCCCAGCTCCACCGCAAACTCCGAATCGAAGC
GGTCGAAACAGCCCTCTACTTTTTCTGTCAGGCCACCTATGGGGCGCTGC
CCGAAGGCGCGTTCCCG back to topCoding sequence (CDS) from alignment at scaffold_3:360797..363863- >mRNA_138 ID=mRNA_138|Name=jgi.p|Nanoce1779_2|576343|organism=Nannochloropsis oceanica|type=CDS|length=522bp|location=Sequence derived from alignment at scaffold_3:360797..363863- (Nannochloropsis oceanica)
ATGGCCTATGAGCGGGGGAGAAGGACAGGAACAAGATGCGTCGTTCGATC
CTACCTCACACAGCACCGCACGGGACTTGATCGCAAAGCAGGACGGTGCC
ACCACGGTCCACGTACCGTCCTCTGTCATCTCGAAACACTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGGCATCACTCTTATTGCCGG
ACAGTGTGGATGTCATGTAAGGACTGCTGTTGGATCCCGCGAACCAATTA
TCCACGCCGTCATGCTCGCTGTGCATGTACGTGGCATCTATGTTCCAGTA
GGTATCCCTGATCCAGCCTTCCAGGCCGAAGGTATCACGATTGTCACGAT
GACGCATCAGAAACTCGCTTGGACGGCGCCGATGATATCCGATATAACCG
CCCCTTTTCCCCATAAGAGAGTGCACGAAGGCGTTATCTGCAGCAGAATC
GAGCGAAACCAAGTGCCCGCCCAATTTTTTCTGACAGTGCGCCCACGCAT
CCCACCAGGATACGCTGTGTAA back to top
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