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Properties
| Property Name | Value |
| TranscriptId | 571902 |
| Track | FilteredModels2 |
| ProteinId | 571816 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_1 | supercontig | scaffold_1:343524..346033 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1342 ID=mRNA_1342|Name=jgi.p|Nanoce1779_2|571816|organism=Nannochloropsis oceanica|type=mRNA|length=2177bp ACAGCCACCACTACCCACAACCACAGCCACAACCACAGTCGTACCAGCCG CAATCGCAGCTTTGTAGAAAGGCGCAACGATTGAGAGATCCACTTTCCGC CGTCGCCACCTGGCCACCTGTGCTTTTATTTGCGCCATCCTGTCGTCGTT CCTCCTTCTTCGTACGGCCGCCTTGTCGTCGTCCTCGTCGTCTTTTTTCG CCCGACGAAGAAGTGCAGTCCTACCCAGCGCATATCTCTGTGCCTCGCCA TCCCTCTCGCCTTTTCGACGCAATTTTGTAACCATGAGCTGCAACGGCGA CAAGAAACGCAGCGGCAGCACTGAAGAGTCCGCCGCAGCCGGCAGCAAGA AACCCAAAGCTGGAAGTAGCCTGGCCTTCCCCGACTACTTTGTCCCCGGT CGTATGCGTGTCCTAACCACCACCACTCCACAAGCTAGTGGGAAAAGTGT GCTCTACTGGATGGTACGCGACCAACGCGCGGACGACAATTACGCCCTGC TTCTTGCCCGGCACCTGGCCAGCCAGCAAAACGTGCCCGTCGCCGTCTGC TTCAACCTCACCCCTCCCACGCCCGAAGACCCATTGGCGACCTTGCGCGC CTATGGTTGGATGCTCAAAGGCCTGAAAGAAGTGGAAGCAGCGCTTAAAG CGAAAAACGTCCCCTTTTTTCTCTTGCAAGGCGGCACTCCTTCTGAGATG GTCCCCGCGCTCGCCTCCGAGCTCCAAGCCAGCAGCGTCATCACTGACTT CTCTCCCCTCCGCGAGGCCTTGGTACATGCCCAAGCTGTTGCCACTTCAT TAGACAGAGCGGGGCGCCCACTTTTGCAGGTGGATGCACATAACATAGTG CCTGTGTGGCAAGCTTCTCCAAAGCTCGAAGTTGGGGCCCGAACGATTCG CAAAAAAATCCATGACCTCCTCCCTACCTATTTCAAGCCTTTTCCAGTCG AGGGGTTGTTGCCAAATGATCCTGCGGCAGTAGCTGGGATGCCTGGGCGG AAACCAAGGGATGGAGGTGTAGAGTGGGAGAAGGTGCTTGCAGGTCTGAC GATTGACAGGAGTGTAAAAGAGATTGACTGGTTGCAGCCAGGCGCTGCGG CGGGGTGGGCAAATTTAGATGGGTTTATTGAAAAGAGATTGAAGATATTT GCGGAGAAACGAAATGATCCGACAGAGGTGGCGATTAGCCATATGTCGCC ATATTTTAATTTTGGACAGGTGTCGGTGCAGGCGGCAATGCTGAAGGTGA AGGGGGTGAAGAGATATCACGATTCAGTGGCGGCGTTTGTGGAGGAAGGG GTAGTGAGAAGGGAGTTGTCAGATAACTTCTGTTTTTACCAGCCTAAATA TGATTCCTTGGAGGGGGCGGCGGGATGGGCGCAGGAAACATTGAGGGTTC ATGCGGCTGACGAACGCCAATACTGCTACACCCCCGCTCAATTGGAAGAG GGTCAAACTCACGACCAGCTCTGGAACGCCTCTCAACTCCAGCTTGTGCA AGAGGGGAAAATGCACGGATTCCTTCGCATGTACTGGGCCAAAAAAATCT TGGAATGGACGGCATCGCCGACAGCTGCCTTGGCGGTTGCGTTGCAGTTG AACGATCGTTATTCAATTGATGGAAGAGATCCGAATGGCTTCGTGGGAGT GGGATGGTCGGTGATGGGCGTGCATGACATGGGCTGGACGGAACGGAAGC TGGTGGGGAAGATTCGGTACATGAACTATGCGGGCTGCCTGCGAAAATTC GATGTGGAAGAATTTTGCGCCCGGTACCCTGCTGCTATTGCTGCTGCTAG GAAGGTCCAAGCCGCACTGTCACCGCAGGGGGAAGGGCCAATCCCAATGA AGGCAGCAGCGGCGGCGACCACGGGAGATGGAGTTGGAGAAGGAGGAAAG GGGGAGGCAAAGGGAAAAGGGAAAACGAAGAAGTAATGTGGTAGAAATGT GGAGATGAGAAAGGGAGGGGGAATGGCCTCAAAAGGCATGTAAGGGAAGA AGAGAAGAAAAGAAGAGGGAAATGAATGAGCGTAGCGTGGAAAAGGTTTC AACACGCATGCATGAGATCCCAAGACACACAAGTGCATGAACTTACACGA CTATGTCGCAATCTGATGTTGAGAACGAGAACGCCCCAGAAGAAGAAGAA AAGAATGAATGGAACAGACATACAAAC back to topprotein sequence of jgi.p|Nanoce1779_2|571816 >mRNA_1342-protein ID=mRNA_1342-protein|Name=jgi.p|Nanoce1779_2|571816|organism=Nannochloropsis oceanica|type=polypeptide|length=551bp MSCNGDKKRSGSTEESAAAGSKKPKAGSSLAFPDYFVPGRMRVLTTTTPQ ASGKSVLYWMVRDQRADDNYALLLARHLASQQNVPVAVCFNLTPPTPEDP LATLRAYGWMLKGLKEVEAALKAKNVPFFLLQGGTPSEMVPALASELQAS SVITDFSPLREALVHAQAVATSLDRAGRPLLQVDAHNIVPVWQASPKLEV GARTIRKKIHDLLPTYFKPFPVEGLLPNDPAAVAGMPGRKPRDGGVEWEK VLAGLTIDRSVKEIDWLQPGAAAGWANLDGFIEKRLKIFAEKRNDPTEVA ISHMSPYFNFGQVSVQAAMLKVKGVKRYHDSVAAFVEEGVVRRELSDNFC FYQPKYDSLEGAAGWAQETLRVHAADERQYCYTPAQLEEGQTHDQLWNAS QLQLVQEGKMHGFLRMYWAKKILEWTASPTAALAVALQLNDRYSIDGRDP NGFVGVGWSVMGVHDMGWTERKLVGKIRYMNYAGCLRKFDVEEFCARYPA AIAAARKVQAALSPQGEGPIPMKAAAAATTGDGVGEGGKGEAKGKGKTKK * back to topmRNA from alignment at scaffold_1:343524..346033- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1342 ID=mRNA_1342|Name=jgi.p|Nanoce1779_2|571816|organism=Nannochloropsis oceanica|type=mRNA|length=2510bp|location=Sequence derived from alignment at scaffold_1:343524..346033- (Nannochloropsis oceanica) ACAGCCACCACTACCCACAACCACAGCCACAACCACAGTCGTACCAGCCG
CAATCGCAGCTTTGTAGAAAGGCGCAACGATTGAGAGATCCACTTTCCGC
CGTCGCCACCTGGCCACCTGTGCTTTTATTTGCGCCATCCTGTCGTCGTT
CCTCCTTCTTCGTACGGCCGCCTTGTCGTCGTCCTCGTCGTCTTTTTTCG
CCCGACGAAGAAGTGCAGTCCTACCCAGCGCATATCTCTGTGCCTCGCCA
TCCCTCTCGCCTTTTCGACGCAATTTTGTAACCATGAGCTGCAACGGCGA
CAAGAAACGCAGCGGCAGCACTGAAGAGTCCGCCGCAGCCGGCAGCAAGA
AACCCAAAGCTGGAAGTAGCCTGGCCTTCCCCGACTACTTTGTCCCCGGT
CGTATGCGTGTCCTAACCACCACCACTCCACAAGCTAGTGGGAAAAGTGT
GCTCTACTGGATGGTACGCGACCAACGCGCGGACGACAATTACGCCCTGC
TTCTTGCCCGGCACCTGGCCAGCCAGCAAAACGTGCCCGTCGCCGTCTGC
TTCAACCTCACCCCTCCCACGCCCGAAGACCCATTGGCGACCTTGCGCGC
CTATGGTTGGATGCTCAAAGGCCTGAAAGAAGTGGAAGCAGCGCTTAAAG
CGAAAAACGTCCCCTTTTTTCTCTTGCAAGGCGGCACTCCTTCTGAGATG
GTCCCCGCGCTCGCCTCCGAGCTCCAAGCCAGCAGCGTCATCACTGACTT
CTCTCCCCTCCGCGAGGCCTTGGTACATGCCCAAGCTGTTGCCACTTCAT
TAGACAGAGCGGGGCGCCCACTTTTGCAGGTGGATGCACATAACATAGTG
CCTGTGTGGCAAGCTTCTCCAAAGCTCGAAGTTGGGGCCCGAACGATTCG
CAAAAAAATCCATGACCTCCTCCCTACCTATTTCAAGCCTTTTCCAGTCG
AGGGGTTGTTGCCAAATGATCCTGCGGCAGTAGCTGGGATGCCTGGGCGG
AAACCAAGGGATGGAGGTGTAGAGTGGGAGAAGGTGCTTGCAGGTCTGAC
GATTGACAGGAGTGTAAAAGAGATTGACTGGTTGCAGCCAGGCGCTGCGG
CGGGGTGGGCAAATTTAGATGGGTTTATTGAAAAGAGATTGAAGATATTT
GCGGAGAAACGAAATGATCCGACAGAGGTGGCGATTAGCCATATGTCGCC
ATATTTTAATTTTGGACAGGTGTCGGTGCAGGCGGCAATGCTGAAGGTGA
AGGGGGTGAAGAGATATCACGATTCAGTGGCGGCGTTTGTGGAGGAAGGG
GTAGTGAGAAGGGAGTTGTCAGATAACTTCTGTTTTTACCAGCCTAAATA
TGATTCCTTGGAGGGGGCGGCGGGATGGGCGCAGGAAACATTGAGGGTTC
ATGCGGCTGACGAGTAAGTGCTTGTAGGGCTTTTTTCTCCCTCCCTGCCG
GTTGACCGTCTCGTATGACATGTCTTGAAGGATCCCTTGTTACCACCATC
GGGCCTTCTTGCCCAACCTTTTTCCCCTTTAGACCTCCTTTCTTTCCTCG
GATATGCGTTTCGACTCAATCTTCTCATCGAAGAAAAAAACATTTCCTCC
CTCCCTGCTTTCATCCATCCTCCCCTCCTTCCTCCCTCCTCTCTCAGACG
CCAATACTGCTACACCCCCGCTCAATTGGAAGAGGGTCAAACTCACGACC
AGCTCTGGAACGCCTCTCAACTCCAGCTTGTGCAAGAGGGGAAAATGCAC
GGATTCCTTCGCATGTACTGGGCCAAAAAAATCTTGGAATGGACGGCATC
GCCGACAGCTGCCTTGGCGGTTGCGTTGCAGTTGAACGATCGTTATTCAA
TTGATGGAAGAGATCCGAATGGCTTCGTGGGAGTGGGATGGTCGGTGATG
GGCGTGCATGACATGGGCTGGACGGAACGGAAGCTGGTGGGGAAGATTCG
GTAGGGAAGGGGGGACGGGAGGAGGGAAGGGATGCATCGATATTGCATAA
TGAAGCTCTGATTTTTTTCTTGTTCTACCTCCCTCTCCTCTCCCCTTAGG
TACATGAACTATGCGGGCTGCCTGCGAAAATTCGATGTGGAAGAATTTTG
CGCCCGGTACCCTGCTGCTATTGCTGCTGCTAGGAAGGTCCAAGCCGCAC
TGTCACCGCAGGGGGAAGGGCCAATCCCAATGAAGGCAGCAGCGGCGGCG
ACCACGGGAGATGGAGTTGGAGAAGGAGGAAAGGGGGAGGCAAAGGGAAA
AGGGAAAACGAAGAAGTAATGTGGTAGAAATGTGGAGATGAGAAAGGGAG
GGGGAATGGCCTCAAAAGGCATGTAAGGGAAGAAGAGAAGAAAAGAAGAG
GGAAATGAATGAGCGTAGCGTGGAAAAGGTTTCAACACGCATGCATGAGA
TCCCAAGACACACAAGTGCATGAACTTACACGACTATGTCGCAATCTGAT
GTTGAGAACGAGAACGCCCCAGAAGAAGAAGAAAAGAATGAATGGAACAG
ACATACAAAC back to topCoding sequence (CDS) from alignment at scaffold_1:343524..346033- >mRNA_1342 ID=mRNA_1342|Name=jgi.p|Nanoce1779_2|571816|organism=Nannochloropsis oceanica|type=CDS|length=4959bp|location=Sequence derived from alignment at scaffold_1:343524..346033- (Nannochloropsis oceanica) GTACATGAACTATGCGGGCTGCCTGCGAAAATTCGATGTGGAAGAATTTT GCGCCCGGTACCCTGCTGCTATTGCTGCTGCTAGGAAGGTCCAAGCCGCA CTGTCACCGCAGGGGGAAGGGCCAATCCCAATGAAGGCAGCAGCGGCGGC GACCACGGGAGATGGAGTTGGAGAAGGAGGAAAGGGGGAGGCAAAGGGAA AAGGGAAAACGAAGAAGTAAACGCCAATACTGCTACACCCCCGCTCAATT GGAAGAGGGTCAAACTCACGACCAGCTCTGGAACGCCTCTCAACTCCAGC TTGTGCAAGAGGGGAAAATGCACGGATTCCTTCGCATGTACTGGGCCAAA AAAATCTTGGAATGGACGGCATCGCCGACAGCTGCCTTGGCGGTTGCGTT GCAGTTGAACGATCGTTATTCAATTGATGGAAGAGATCCGAATGGCTTCG TGGGAGTGGGATGGTCGGTGATGGGCGTGCATGACATGGGCTGGACGGAA CGGAAGCTGGTGGGGAAGATTCGATGAGCTGCAACGGCGACAAGAAACGC AGCGGCAGCACTGAAGAGTCCGCCGCAGCCGGCAGCAAGAAACCCAAAGC TGGAAGTAGCCTGGCCTTCCCCGACTACTTTGTCCCCGGTCGTATGCGTG TCCTAACCACCACCACTCCACAAGCTAGTGGGAAAAGTGTGCTCTACTGG ATGGTACGCGACCAACGCGCGGACGACAATTACGCCCTGCTTCTTGCCCG GCACCTGGCCAGCCAGCAAAACGTGCCCGTCGCCGTCTGCTTCAACCTCA CCCCTCCCACGCCCGAAGACCCATTGGCGACCTTGCGCGCCTATGGTTGG ATGCTCAAAGGCCTGAAAGAAGTGGAAGCAGCGCTTAAAGCGAAAAACGT CCCCTTTTTTCTCTTGCAAGGCGGCACTCCTTCTGAGATGGTCCCCGCGC TCGCCTCCGAGCTCCAAGCCAGCAGCGTCATCACTGACTTCTCTCCCCTC CGCGAGGCCTTGGTACATGCCCAAGCTGTTGCCACTTCATTAGACAGAGC GGGGCGCCCACTTTTGCAGGTGGATGCACATAACATAGTGCCTGTGTGGC AAGCTTCTCCAAAGCTCGAAGTTGGGGCCCGAACGATTCGCAAAAAAATC CATGACCTCCTCCCTACCTATTTCAAGCCTTTTCCAGTCGAGGGGTTGTT GCCAAATGATCCTGCGGCAGTAGCTGGGATGCCTGGGCGGAAACCAAGGG ATGGAGGTGTAGAGTGGGAGAAGGTGCTTGCAGGTCTGACGATTGACAGG AGTGTAAAAGAGATTGACTGGTTGCAGCCAGGCGCTGCGGCGGGGTGGGC AAATTTAGATGGGTTTATTGAAAAGAGATTGAAGATATTTGCGGAGAAAC GAAATGATCCGACAGAGGTGGCGATTAGCCATATGTCGCCATATTTTAAT TTTGGACAGGTGTCGGTGCAGGCGGCAATGCTGAAGGTGAAGGGGGTGAA GAGATATCACGATTCAGTGGCGGCGTTTGTGGAGGAAGGGGTAGTGAGAA GGGAGTTGTCAGATAACTTCTGTTTTTACCAGCCTAAATATGATTCCTTG GAGGGGGCGGCGGGATGGGCGCAGGAAACATTGAGGGTTCATGCGGCTGA CGAGTACATGAACTATGCGGGCTGCCTGCGAAAATTCGATGTGGAAGAAT TTTGCGCCCGGTACCCTGCTGCTATTGCTGCTGCTAGGAAGGTCCAAGCC GCACTGTCACCGCAGGGGGAAGGGCCAATCCCAATGAAGGCAGCAGCGGC GGCGACCACGGGAGATGGAGTTGGAGAAGGAGGAAAGGGGGAGGCAAAGG GAAAAGGGAAAACGAAGAAGTAAACGCCAATACTGCTACACCCCCGCTCA ATTGGAAGAGGGTCAAACTCACGACCAGCTCTGGAACGCCTCTCAACTCC AGCTTGTGCAAGAGGGGAAAATGCACGGATTCCTTCGCATGTACTGGGCC AAAAAAATCTTGGAATGGACGGCATCGCCGACAGCTGCCTTGGCGGTTGC GTTGCAGTTGAACGATCGTTATTCAATTGATGGAAGAGATCCGAATGGCT TCGTGGGAGTGGGATGGTCGGTGATGGGCGTGCATGACATGGGCTGGACG GAACGGAAGCTGGTGGGGAAGATTCGATGAGCTGCAACGGCGACAAGAAA CGCAGCGGCAGCACTGAAGAGTCCGCCGCAGCCGGCAGCAAGAAACCCAA AGCTGGAAGTAGCCTGGCCTTCCCCGACTACTTTGTCCCCGGTCGTATGC GTGTCCTAACCACCACCACTCCACAAGCTAGTGGGAAAAGTGTGCTCTAC TGGATGGTACGCGACCAACGCGCGGACGACAATTACGCCCTGCTTCTTGC CCGGCACCTGGCCAGCCAGCAAAACGTGCCCGTCGCCGTCTGCTTCAACC TCACCCCTCCCACGCCCGAAGACCCATTGGCGACCTTGCGCGCCTATGGT TGGATGCTCAAAGGCCTGAAAGAAGTGGAAGCAGCGCTTAAAGCGAAAAA CGTCCCCTTTTTTCTCTTGCAAGGCGGCACTCCTTCTGAGATGGTCCCCG CGCTCGCCTCCGAGCTCCAAGCCAGCAGCGTCATCACTGACTTCTCTCCC CTCCGCGAGGCCTTGGTACATGCCCAAGCTGTTGCCACTTCATTAGACAG AGCGGGGCGCCCACTTTTGCAGGTGGATGCACATAACATAGTGCCTGTGT GGCAAGCTTCTCCAAAGCTCGAAGTTGGGGCCCGAACGATTCGCAAAAAA ATCCATGACCTCCTCCCTACCTATTTCAAGCCTTTTCCAGTCGAGGGGTT GTTGCCAAATGATCCTGCGGCAGTAGCTGGGATGCCTGGGCGGAAACCAA GGGATGGAGGTGTAGAGTGGGAGAAGGTGCTTGCAGGTCTGACGATTGAC AGGAGTGTAAAAGAGATTGACTGGTTGCAGCCAGGCGCTGCGGCGGGGTG GGCAAATTTAGATGGGTTTATTGAAAAGAGATTGAAGATATTTGCGGAGA AACGAAATGATCCGACAGAGGTGGCGATTAGCCATATGTCGCCATATTTT AATTTTGGACAGGTGTCGGTGCAGGCGGCAATGCTGAAGGTGAAGGGGGT GAAGAGATATCACGATTCAGTGGCGGCGTTTGTGGAGGAAGGGGTAGTGA GAAGGGAGTTGTCAGATAACTTCTGTTTTTACCAGCCTAAATATGATTCC TTGGAGGGGGCGGCGGGATGGGCGCAGGAAACATTGAGGGTTCATGCGGC TGACGAGTACATGAACTATGCGGGCTGCCTGCGAAAATTCGATGTGGAAG AATTTTGCGCCCGGTACCCTGCTGCTATTGCTGCTGCTAGGAAGGTCCAA GCCGCACTGTCACCGCAGGGGGAAGGGCCAATCCCAATGAAGGCAGCAGC GGCGGCGACCACGGGAGATGGAGTTGGAGAAGGAGGAAAGGGGGAGGCAA AGGGAAAAGGGAAAACGAAGAAGTAAACGCCAATACTGCTACACCCCCGC TCAATTGGAAGAGGGTCAAACTCACGACCAGCTCTGGAACGCCTCTCAAC TCCAGCTTGTGCAAGAGGGGAAAATGCACGGATTCCTTCGCATGTACTGG GCCAAAAAAATCTTGGAATGGACGGCATCGCCGACAGCTGCCTTGGCGGT TGCGTTGCAGTTGAACGATCGTTATTCAATTGATGGAAGAGATCCGAATG GCTTCGTGGGAGTGGGATGGTCGGTGATGGGCGTGCATGACATGGGCTGG ACGGAACGGAAGCTGGTGGGGAAGATTCGATGAGCTGCAACGGCGACAAG AAACGCAGCGGCAGCACTGAAGAGTCCGCCGCAGCCGGCAGCAAGAAACC CAAAGCTGGAAGTAGCCTGGCCTTCCCCGACTACTTTGTCCCCGGTCGTA TGCGTGTCCTAACCACCACCACTCCACAAGCTAGTGGGAAAAGTGTGCTC TACTGGATGGTACGCGACCAACGCGCGGACGACAATTACGCCCTGCTTCT TGCCCGGCACCTGGCCAGCCAGCAAAACGTGCCCGTCGCCGTCTGCTTCA ACCTCACCCCTCCCACGCCCGAAGACCCATTGGCGACCTTGCGCGCCTAT GGTTGGATGCTCAAAGGCCTGAAAGAAGTGGAAGCAGCGCTTAAAGCGAA AAACGTCCCCTTTTTTCTCTTGCAAGGCGGCACTCCTTCTGAGATGGTCC CCGCGCTCGCCTCCGAGCTCCAAGCCAGCAGCGTCATCACTGACTTCTCT CCCCTCCGCGAGGCCTTGGTACATGCCCAAGCTGTTGCCACTTCATTAGA CAGAGCGGGGCGCCCACTTTTGCAGGTGGATGCACATAACATAGTGCCTG TGTGGCAAGCTTCTCCAAAGCTCGAAGTTGGGGCCCGAACGATTCGCAAA AAAATCCATGACCTCCTCCCTACCTATTTCAAGCCTTTTCCAGTCGAGGG GTTGTTGCCAAATGATCCTGCGGCAGTAGCTGGGATGCCTGGGCGGAAAC CAAGGGATGGAGGTGTAGAGTGGGAGAAGGTGCTTGCAGGTCTGACGATT GACAGGAGTGTAAAAGAGATTGACTGGTTGCAGCCAGGCGCTGCGGCGGG GTGGGCAAATTTAGATGGGTTTATTGAAAAGAGATTGAAGATATTTGCGG AGAAACGAAATGATCCGACAGAGGTGGCGATTAGCCATATGTCGCCATAT TTTAATTTTGGACAGGTGTCGGTGCAGGCGGCAATGCTGAAGGTGAAGGG GGTGAAGAGATATCACGATTCAGTGGCGGCGTTTGTGGAGGAAGGGGTAG TGAGAAGGGAGTTGTCAGATAACTTCTGTTTTTACCAGCCTAAATATGAT TCCTTGGAGGGGGCGGCGGGATGGGCGCAGGAAACATTGAGGGTTCATGC GGCTGACGA back to top
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