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Properties
Property Name | Value |
TranscriptId | 645465 |
Track | FilteredModels2 |
ProteinId | 645379 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_1 | supercontig | scaffold_1:240231..243384 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1307 ID=mRNA_1307|Name=jgi.p|Nanoce1779_2|645379|organism=Nannochloropsis oceanica|type=mRNA|length=2632bp TACTAGCCGGTATAGTCTTGGCTCACAAACTTCAGTTTCTGCTTGGCGCG CTTGCGTTGACGCGGGATCTGAGCAGCCTTTTTTCGACACACCCACACGA TACTGACCGCGCTCCTCGCTATCGGCATTTCCTTCCAGCGCTGCCACACC TCATTAAGCCATGGCGGACAAACGCAAGCTGCAGACGGAGATCGACCGTA CCTTAAAAAAGGTGGACGAGGGCGTGGACCTCTTTGACGAGATCTGGGCC AAGGTCTATTCGGCCCGCGATCCGAACCACAAGGAGAAATACGAGCAAGA CCTGAAAAAGGAGATAAAGAAGCTGCAACGCCACCGCGACCAAATCAAAA CATGGCTGGGCCAAAACGACATCAAGGATAAGAAGAATCTGACGGAGGCC CGAAAATTGATTGAGACGAAGATGGAGGAGTTTAAAGTCTGCGAGAAGGA GGCAAAGTGCAAGATGTTTTCCAAGGAGGGCTTGGCACGGGAACAGAAAA TGGATCCGAGAGAAATAGCGAAGAACAAGTCAAGGGAGTGGTTGGACAAT GCCATCAACAACCTGAATACTCAGATTGAGAGTTTTGATGCTGATATCGA GAAGCTATCGGCAGGGAGAGGGAAGAGTAAGAACAAGGAAGAGATCGCGG GCTTGGAAGAGAGTTTGATTGGGCATAGACAGCATGTGACAAAGCTGGAG CAGATCATTCGGTTGTTGGACAACGATTTGAGGGAGCCGGATGTAATTGA TGAGCTGAGGGATGATGTGGAGTACTTCGTTGAGGGGAACCAGGATGGGA CTTACCAAAGTAGCTATGGGGATGAAATGGAAATTTATGACCCGTTGGAT TTAGACGAGGCGCCGATCCAGATCAACGATTTGCTAGGTAATGCTGGGCC GAAGAAGAGCCCCAGGGACGGGGACGAGGGTGACGGAGGGGAGGGCGGAG GTGGGGGAGGAGGGGGGGATGAGGAGGATGCCGACAAGTCGGCGAGTAGC ACGAAGACAGCGGGATCGACCAGCGCTGGTGTGAAAGAGAAGAAAGGAGG AGTGGCTGCGGGGGGTGCGGGTACGGCTGGGACAGGAGGAGGAGTAACAG AGGCACAAGCATCGGTGCCAACTGCCACCACCACTGGGGCCCCATTTAAG GGTGCTGCTGCTGCTTCTCATGCCGCCCAACAGCAACCCAACCCGCCCAC CTTTTCTCCTACTCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCCACCGCCATTGCGCCCTCCGCAAGGATCACCACCACTGGCATCGATC GTCGGAGGTGGTGGGCAGCAGCATCAAGTTTCCGGGAAGGGGGATCAGCA ACAGCATACCATGCAGCAACAGCAACGACAGCATCAGCAACAAGCTATTC TCCAACAGCAACAGCAACAGCAGCAACTTGTTCAGCAGCAACAGCACAAG CAGCAGCAGCAGCAGCAAGTATTTGGTGCCGGTGGTGGCATCGTACCAGG GATGGACGGGAGCACCAATGCGGCCACCACCGCAGGGGGAGGAGGAGCAG AAGATGGAGGCATGGACCCTGCTACTGCTGCGGCCTTCGCCAACAATTCT CTGCGGATCGGGCCCGAGACCCTGCAAATGCAGATGAATTACCTCAATCG TGCCATGCTCTATATCCCCACGCAACACGATGCTGAGCGGCCAAAGCAAT ACTTCCCCCGAAATCCTTACCCGGTCCACGCCGCCTTCCCCCTCGCTCCT GCCCCCACTTTTGAATCACCCTCGATTTTCGAGAAACTTGGCCCGGACAC GCTCTTCTTCATTTTTTACTACCAGCAGGGGACGTACCAACAGTATCTCG CTGCCAAGGAGTTAAAGAAGCAGTCGTGGCGTTATCACAAGAAGTACATG ACCTGGTTTCAGCGGCATGAGGAGCCGCAAGTGACGACGGACGAATATGA GCAGGGGACGTACGTCTACTTTGATTGTGAGTCGGGCTGGTGTACAAGGA TCAAGCAGGCGTTCCGATTTGATTACTCGGCGCTGGAAAACGATGAGCCG GGAGGGGAAAATTAGGTGTGATGGGGGAGCGAGCGGGCGACAGGAGAGGG ATGGAAGGAAGAGAAGGGAGGGGTCAAATATCAAGAATCGGAGAAAAGGG TTAAGGGATTAGAAAGAAGAGCACCATAAAGAAAGATTATATGAAGAAAA AGGCCGACATCATCGAGACTTTTTTTTCTTGTTACGTCGTTTCAATATGC GTGTTCCTCCTTCAGCAACTCCACGAGCATGGAGGTTGGAGGTTTGTGGC TTGCCACTGAAGGCAGCTTATAGATTGTGTGAAAGAGGAAGGTATGCTGC AGTAACTCAAAAAAACGACCTCCGTACCCGAAGAGTTAGTATTGCAGCCT GCGGACCTGCACAATCTTCCCGAACAAGCACAAGCATGGGCCAGCCGTTA GCGTATGAAGCGAGATGAATCTCCGCAACTTGGCTTGCTGAAGGCTTGAC AAGACTCACACAAAATACTTAGCTACGCCAAGAGTACATGTAAGCCATTC AGCAGAAGTACATTGACCTCAAGTCATCTTAATTACAAATTATGTAGGAG CTTTGTTGTCGCCCTTGACGACCTTGTAGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|645379 >mRNA_1307-protein ID=mRNA_1307-protein|Name=jgi.p|Nanoce1779_2|645379|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp MADKRKLQTEIDRTLKKVDEGVDLFDEIWAKVYSARDPNHKEKYEQDLKK EIKKLQRHRDQIKTWLGQNDIKDKKNLTEARKLIETKMEEFKVCEKEAKC KMFSKEGLAREQKMDPREIAKNKSREWLDNAINNLNTQIESFDADIEKLS AGRGKSKNKEEIAGLEESLIGHRQHVTKLEQIIRLLDNDLREPDVIDELR DDVEYFVEGNQDGTYQSSYGDEMEIYDPLDLDEAPIQINDLLGNAGPKKS PRDGDEGDGGEGGGGGGGGDEEDADKSASSTKTAGSTSAGVKEKKGGVAA GGAGTAGTGGGVTEAQASVPTATTTGAPFKGAAAASHAAQQQPNPPTFSP TPQQQQQQQQQQQQPPPLRPPQGSPPLASIVGGGGQQHQVSGKGDQQQHT MQQQQRQHQQQAILQQQQQQQQLVQQQQHKQQQQQQVFGAGGGIVPGMDG STNAATTAGGGGAEDGGMDPATAAAFANNSLRIGPETLQMQMNYLNRAML YIPTQHDAERPKQYFPRNPYPVHAAFPLAPAPTFESPSIFEKLGPDTLFF IFYYQQGTYQQYLAAKELKKQSWRYHKKYMTWFQRHEEPQVTTDEYEQGT YVYFDCESGWCTRIKQAFRFDYSALENDEPGGEN* back to topmRNA from alignment at scaffold_1:240231..243384+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1307 ID=mRNA_1307|Name=jgi.p|Nanoce1779_2|645379|organism=Nannochloropsis oceanica|type=mRNA|length=3154bp|location=Sequence derived from alignment at scaffold_1:240231..243384+ (Nannochloropsis oceanica) TACTAGCCGGTATAGTCTTGGCTCACAAACTTCAGTTTCTGCTTGGCGCG
CTTGCGTTGACGCGGGATCTGAGCAGCCTTTTTTCGACACACCCACACGA
TACTGACCGCGCTCCTCGCTATCGGCATTTCCTTCCAGCGCTGCCACACC
TCATTAAGCCATGGCGGACAAACGCAAGCTGCAGACGGAGATCGACCGTA
CCTTAAAAAAGGTGGACGAGGGCGTGGACCTCTTTGACGAGATCTGGGCC
AAGGTCTATTCGGCCCGCGATCCGAACCACAAGGAGAAATACGAGCAAGA
CCTGAAAAAGGAGATAAAGAAGCTGCAACGCCACCGCGACCAAATCAAAA
CATGGCTGGGCCAAAACGACATCAAGGATAAGAAGAATCTGACGGAGGCC
CGAAAATTGATTGAGACGAAGATGGAGGAGTTTAAAGTCTGCGAGAAGGA
GGCAAAGTGCAAGATGTTTTCCAAGGAGGGCTTGGCACGGGAACAGAAAA
TGGATCCGAGAGAAATAGCGAAGAACAAGTCAAGGGAGTGGTTGGACAAT
GCCATCAACAACCTGAATACTCAGATTGAGAGTTTTGATGCTGATATCGA
GAAGCTATCGGCAGGGAGAGGGAAGAGTAAGAACAAGGAAGAGATCGCGG
GCTTGGAAGAGAGTTTGATTGGGCATAGACAGCATGTGACAAAGCTGGAG
CAGATCATTCGGTTGTTGGACAACGATTTGAGGGAGCCGGATGTAATTGA
TGAGCTGAGGGATGATGTGGAGTACTTCGTTGAGGGGAACCAGGATGGGA
CTTACCAAAGTAGCTATGGGGATGAAATGGAAATTTATGACCCGTTGGAT
TTAGACGAGGCGCCGATCCAGATCAACGATTTGCTAGGTAATGCTGGGCC
GAAGAAGAGCCCCAGGGACGGGGACGAGGGTGACGGAGGGGAGGGCGGAG
GTGGGGGAGGAGGGGGGGATGAGGAGGATGCCGACAAGTCGGCGAGTAGC
ACGAAGACAGCGGGATCGACCAGCGCTGGTGTGAAAGAGAAGAAAGGAGG
AGTGGCTGCGGGGGGTGCGGGTACGGCTGGGACAGGAGGAGGAGTAACAG
AGGGTCTGAAGGGGATCGGGCGGCCAGGAAAAGCTCAACCTCCAAATCCT
AGCCCGGCGCGGACAGCGAACGCGTCGTCAGCAGCGACAAGAGGAGCAGC
AGCCGGAGCAGCAGCAGGAGGGGGAGGGGTGAAGGTGACGCCGGAAAAAC
CCCTGGTGGTACCACGACCGATGGCTGCGGCGGTCATGGCGGGAATGGTG
GGTAAGCCGACTGCGGCGCAGGCGTTGAAGAGCACGTTAGCAGCAGCTGT
GGTTGCTGGTGCGCGAGGAGGAGGGGATGGAGGCGCGACGACTTCGACAG
CTGCGGATGTTTTGAGAGAAAAGTCGGCGCAAGCTCCGGGACTGGCACAG
GCGCAACAGCAGCAGCGGGCGACGGCGCAACGGCAGCAACAGGCGCTAGC
AGCGCAGCAGCAGCAGGTGGTGGAGCAGCAGGCAGCGCAGCAGAAGTCGT
TGCTGGAGAGGCAGAAGAATCTCCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAACAACCACATACGGCAGCACAAGCATCGGTGCCAACTGCCAC
CACCACTGGGGCCCCATTTAAGGGTGCTGCTGCTGCTTCTCATGCCGCCC
AACAGCAACCCAACCCGCCCACCTTTTCTCCTACTCCCCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCCACCGCCATTGCGCCCTCCGCAAGG
ATCACCACCACTGGCATCGATCGTCGGAGGTGGTGGGCAGCAGCATCAAG
TTTCCGGGAAGGGGGATCAGCAACAGCATACCATGCAGCAACAGCAACGA
CAGCATCAGCAACAAGCTATTCTCCAACAGCAACAGCAACAGCAGCAACT
TGTTCAGCAGCAACAGCACAAGCAGCAGCAGCAGCAGCAAGTATTTGGTG
CCGGTGGTGGCATCGTACCAGGGATGGACGGGAGCACCAATGCGGCCACC
ACCGCAGGGGGAGGAGGAGCAGAAGATGGAGGCATGGACCCTGCTACTGC
TGCGGCCTTCGCCAACAATTCTCTGCGGATCGGGCCCGAGACCCTGCAAA
TGCAGATGAATTACCTCAATCGTGCCATGCTCTATATCCCCACGCAACAC
GATGCTGAGCGGCCAAAGCAATACTTCCCCCGAAATCCTTACCCGGTCCA
CGCCGCCTTCCCCCTCGCTCCTGCCCCCACTTTTGAATCACCCTCGATTT
TCGAGAAACTTGGCCCGGACACGCTCTTCTTCATTTTTTACTACCAGCAG
GGGACGTACCAACAGTATCTCGCTGCCAAGGAGTTAAAGAAGCAGTCGTG
GCGTTATCACAAGAAGTACATGACCTGGTTTCAGCGGCATGAGGAGCCGC
AAGTGACGACGGACGAATATGAGCAGGGGACGTACGTCTACTTTGATTGT
GAGTCGGGCTGGTGTACAAGGATCAAGCAGGCGTTCCGATTTGATTACTC
GGCGCTGGAAAACGATGAGCCGGGAGGGGAAAATTAGGTGTGATGGGGGA
GCGAGCGGGCGACAGGAGAGGGATGGAAGGAAGAGAAGGGAGGGGTCAAA
TATCAAGAATCGGAGAAAAGGGTTAAGGGATTAGAAAGAAGAGCACCATA
AAGAAAGATTATATGAAGAAAAAGGCCGACATCATCGAGACTTTTTTTTC
TTGTTACGTCGTTTCAATATGCGTGTTCCTCCTTCAGCAACTCCACGAGC
ATGGAGGTTGGAGGTTTGTGGCTTGCCACTGAAGGCAGCTTATAGATTGT
GTGAAAGAGGAAGGTATGCTGCAGTAACTCAAAAAAACGACCTCCGTACC
CGAAGAGTTAGTATTGCAGCCTGCGGACCTGCACAATCTTCCCGAACAAG
CACAAGCATGGGCCAGCCGTTAGCGTATGAAGCGAGATGAATCTCCGCAA
CTTGGCTTGCTGAAGGCTTGACAAGACTCACACAAAATACTTAGCTACGC
CAAGAGTACATGTAAGCCATTCAGCAGAAGTACATTGACCTCAAGTCATC
TTAATTACAAATTATGTAGGAGCTTTGTTGTCGCCCTTGACGACCTTGTA
GGAG back to topCoding sequence (CDS) from alignment at scaffold_1:240231..243384+ >mRNA_1307 ID=mRNA_1307|Name=jgi.p|Nanoce1779_2|645379|organism=Nannochloropsis oceanica|type=CDS|length=3810bp|location=Sequence derived from alignment at scaffold_1:240231..243384+ (Nannochloropsis oceanica) ATGGCGGACAAACGCAAGCTGCAGACGGAGATCGACCGTACCTTAAAAAA GGTGGACGAGGGCGTGGACCTCTTTGACGAGATCTGGGCCAAGGTCTATT CGGCCCGCGATCCGAACCACAAGGAGAAATACGAGCAAGACCTGAAAAAG GAGATAAAGAAGCTGCAACGCCACCGCGACCAAATCAAAACATGGCTGGG CCAAAACGACATCAAGGATAAGAAGAATCTGACGGAGGCCCGAAAATTGA TTGAGACGAAGATGGAGGAGTTTAAAGTCTGCGAGAAGGAGGCAAAGTGC AAGATGTTTTCCAAGGAGGGCTTGGCACGGGAACAGAAAATGGATCCGAG AGAAATAGCGAAGAACAAGTCAAGGGAGTGGTTGGACAATGCCATCAACA ACCTGAATACTCAGATTGAGAGTTTTGATGCTGATATCGAGAAGCTATCG GCAGGGAGAGGGAAGAGTAAGAACAAGGAAGAGATCGCGGGCTTGGAAGA GAGTTTGATTGGGCATAGACAGCATGTGACAAAGCTGGAGCAGATCATTC GGTTGTTGGACAACGATTTGAGGGAGCCGGATGTAATTGATGAGCTGAGG GATGATGTGGAGTACTTCGTTGAGGGGAACCAGGATGGGACTTACCAAAG TAGCTATGGGGATGAAATGGAAATTTATGACCCGTTGGATTTAGACGAGG CGCCGATCCAGATCAACGATTTGCTAGGTAATGCTGGGCCGAAGAAGAGC CCCAGGGACGGGGACGAGGGTGACGGAGGGGAGGGCGGAGGTGGGGGAGG AGGGGGGGATGAGGAGGATGCCGACAAGTCGGCGAGTAGCACGAAGACAG CGGGATCGACCAGCGCTGGTGTGAAAGAGAAGAAAGGAGGAGTGGCTGCG GGGGGTGCGGGTACGGCTGGGACAGGAGGAGGAGTAACAGAGGCACAAGC ATCGGTGCCAACTGCCACCACCACTGGGGCCCCATTTAAGGGTGCTGCTG CTGCTTCTCATGCCGCCCAACAGCAACCCAACCCGCCCACCTTTTCTCCT ACTCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCGCC ATTGCGCCCTCCGCAAGGATCACCACCACTGGCATCGATCGTCGGAGGTG GTGGGCAGCAGCATCAAGTTTCCGGGAAGGGGGATCAGCAACAGCATACC ATGCAGCAACAGCAACGACAGCATCAGCAACAAGCTATTCTCCAACAGCA ACAGCAACAGCAGCAACTTGTTCAGCAGCAACAGCACAAGCAGCAGCAGC AGCAGCAAGTATTTGGTGCCGGTGGTGGCATCGTACCAGGGATGGACGGG AGCACCAATGCGGCCACCACCGCAGGGGGAGGAGGAGCAGAAGATGGAGG CATGGACCCTGCTACTGCTGCGGCCTTCGCCAACAATTCTCTGCGGATCG GGCCCGAGACCCTGCAAATGCAGATGAATTACCTCAATCGTGCCATGCTC TATATCCCCACGCAACACGATGCTGAGCGGCCAAAGCAATACTTCCCCCG AAATCCTTACCCGGTCCACGCCGCCTTCCCCCTCGCTCCTGCCCCCACTT TTGAATCACCCTCGATTTTCGAGAAACTTGGCCCGGACACGCTCTTCTTC ATTTTTTACTACCAGCAGGGGACGTACCAACAGTATCTCGCTGCCAAGGA GTTAAAGAAGCAGTCGTGGCGTTATCACAAGAAGTACATGACCTGGTTTC AGCGGCATGAGGAGCCGCAAGTGACGACGGACGAATATGAGCAGGGGACG TACGTCTACTTTGATTGTGAGTCGGGCTGGTGTACAAGGATCAAGCAGGC GTTCCGATTTGATTACTCGGCGCTGGAAAACGATGAGCCGGGAGGGGAAA ATTAGATGGCGGACAAACGCAAGCTGCAGACGGAGATCGACCGTACCTTA AAAAAGGTGGACGAGGGCGTGGACCTCTTTGACGAGATCTGGGCCAAGGT CTATTCGGCCCGCGATCCGAACCACAAGGAGAAATACGAGCAAGACCTGA AAAAGGAGATAAAGAAGCTGCAACGCCACCGCGACCAAATCAAAACATGG CTGGGCCAAAACGACATCAAGGATAAGAAGAATCTGACGGAGGCCCGAAA ATTGATTGAGACGAAGATGGAGGAGTTTAAAGTCTGCGAGAAGGAGGCAA AGTGCAAGATGTTTTCCAAGGAGGGCTTGGCACGGGAACAGAAAATGGAT CCGAGAGAAATAGCGAAGAACAAGTCAAGGGAGTGGTTGGACAATGCCAT CAACAACCTGAATACTCAGATTGAGAGTTTTGATGCTGATATCGAGAAGC TATCGGCAGGGAGAGGGAAGAGTAAGAACAAGGAAGAGATCGCGGGCTTG GAAGAGAGTTTGATTGGGCATAGACAGCATGTGACAAAGCTGGAGCAGAT CATTCGGTTGTTGGACAACGATTTGAGGGAGCCGGATGTAATTGATGAGC TGAGGGATGATGTGGAGTACTTCGTTGAGGGGAACCAGGATGGGACTTAC CAAAGTAGCTATGGGGATGAAATGGAAATTTATGACCCGTTGGATTTAGA CGAGGCGCCGATCCAGATCAACGATTTGCTAGGTAATGCTGGGCCGAAGA AGAGCCCCAGGGACGGGGACGAGGGTGACGGAGGGGAGGGCGGAGGTGGG GGAGGAGGGGGGGATGAGGAGGATGCCGACAAGTCGGCGAGTAGCACGAA GACAGCGGGATCGACCAGCGCTGGTGTGAAAGAGAAGAAAGGAGGAGTGG CTGCGGGGGGTGCGGGTACGGCTGGGACAGGAGGAGGAGTAACAGAGGCA CAAGCATCGGTGCCAACTGCCACCACCACTGGGGCCCCATTTAAGGGTGC TGCTGCTGCTTCTCATGCCGCCCAACAGCAACCCAACCCGCCCACCTTTT CTCCTACTCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCA CCGCCATTGCGCCCTCCGCAAGGATCACCACCACTGGCATCGATCGTCGG AGGTGGTGGGCAGCAGCATCAAGTTTCCGGGAAGGGGGATCAGCAACAGC ATACCATGCAGCAACAGCAACGACAGCATCAGCAACAAGCTATTCTCCAA CAGCAACAGCAACAGCAGCAACTTGTTCAGCAGCAACAGCACAAGCAGCA GCAGCAGCAGCAAGTATTTGGTGCCGGTGGTGGCATCGTACCAGGGATGG ACGGGAGCACCAATGCGGCCACCACCGCAGGGGGAGGAGGAGCAGAAGAT GGAGGCATGGACCCTGCTACTGCTGCGGCCTTCGCCAACAATTCTCTGCG GATCGGGCCCGAGACCCTGCAAATGCAGATGAATTACCTCAATCGTGCCA TGCTCTATATCCCCACGCAACACGATGCTGAGCGGCCAAAGCAATACTTC CCCCGAAATCCTTACCCGGTCCACGCCGCCTTCCCCCTCGCTCCTGCCCC CACTTTTGAATCACCCTCGATTTTCGAGAAACTTGGCCCGGACACGCTCT TCTTCATTTTTTACTACCAGCAGGGGACGTACCAACAGTATCTCGCTGCC AAGGAGTTAAAGAAGCAGTCGTGGCGTTATCACAAGAAGTACATGACCTG GTTTCAGCGGCATGAGGAGCCGCAAGTGACGACGGACGAATATGAGCAGG GGACGTACGTCTACTTTGATTGTGAGTCGGGCTGGTGTACAAGGATCAAG CAGGCGTTCCGATTTGATTACTCGGCGCTGGAAAACGATGAGCCGGGAGG GGAAAATTAG back to top
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