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Properties
| Property Name | Value |
|---|
| TranscriptId | 535292 |
| Track | FilteredModels2 |
| ProteinId | 535206 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:154304..155657 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1270 ID=mRNA_1270|Name=jgi.p|Nanoce1779_2|535206|organism=Nannochloropsis oceanica|type=mRNA|length=1214bp
CCCCCCCCCCCCCCCGCCCTCCAAGCATCGGCACTGCATGACGCTGCTGC
CACCAGAAATTGATATTGAGTAGTCGACGTCCCACGGAGCGTAACGGCTT
GCCGGGGCAGGGCTCCCTGCAGCGTCCCTGGTCTCCCCTCCCCGCCCGGC
TCAACTGCGCATACCTCCTCACCCTCTCCTCTTTCCGGCACTTCCCAATC
ACAGAATCTCACCACGACTACGGGAATGAACGTGGTTCGTGAAATTCAGC
GGCTCAATGAAAAGGAGCTCCAGCGGGGGACCGCCTCCACCGAAGGGAGT
TGGCATGACCAGTATAAGGACTCTGCGTGGGTATTTGTGGGTAGCTTGCC
CCTCCAATTGAGCGAGGGAGATGTGCTGTGTGTCATGAGTCAATGGGGGG
AGATTGAAGATTTGCATTTGGTTCGAGATAAGGGCACGGGAAAGAGTAAG
GGGTTTGCGTTTGTGAAGTATGAGGACCAGAGGAGCACGATCTTGGCGGT
AGATAATTTCAATGGAGGCAAATTGCTAGATCGAACATTGAGGGTAGATC
ATAAAGAAAAGTATGCGTTGCCGAAAGAGGTGCTGGAGAAGGAGGAGAAC
AAGGAGAAGGCACTAAAGGAGAAAGAGGGAGGGAAGGGAGAGGGGGGAAG
GTGGAAGCCGGGGCATGCGTATGAAGGGAAGAGTTTGGTGGGGGAGCATG
ATTTGAGTAAGGGGGTGGATTTGTTTGCACCGGAAGGAGGCCAAAAAGGC
GAAGAAAAAGGAGAAGAAGAAGAAAAGGAAGATGGAAGAGGAGGCCTTGG
ACCGGCTGGCGGATGGAAGGGAAGGAGGGAGGGAAGGAAGGAGGGAGGGT
GAGAGACGACGGACGCAGAGTAGGAGCCGTAGCGGCGATCGAAACGGAGG
AGGGAAGGAGGGAGATGAGGAGAGGAGGAACAGTAGAAGATTTGGCGACA
GAGGAGAAAAAGAGGGAGGAAGGGATGGAGCAAGAGGGCGGTCACCTTCG
AGGGAGAGGGAGAAGGAGAGGGATGGACGGGGGATGCCGCGTGGGAAATG
GGAACGTGGGGAGGAGGCAAGGGGGGAGGAAGAGGATGAGGAAGGACGGC
CTTCGTACTCTAAGAAAGCAGCGGCTGCGTCGCTACCTCTGCCACCACTA
CCGACCGATGGACAGCCATCTTGGAGGGGGAAATATGATCCGCATGCACG
GCAGGAGCAGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|535206 >mRNA_1270-protein ID=mRNA_1270-protein|Name=jgi.p|Nanoce1779_2|535206|organism=Nannochloropsis oceanica|type=polypeptide|length=209bp
MNVVREIQRLNEKELQRGTASTEGSWHDQYKDSAWVFVGSLPLQLSEGDV
LCVMSQWGEIEDLHLVRDKGTGKSKGFAFVKYEDQRSTILAVDNFNGGKL
LDRTLRVDHKEKYALPKEVLEKEENKEKALKEKEGGKGEGGRWKPGHAYE
GKSLVGEHDLSKGVDLFAPEGGQKGEEKGEEEEKEDGRGGLGPAGGWKGR
REGRKEGG* back to topmRNA from alignment at scaffold_1:154304..155657+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1270 ID=mRNA_1270|Name=jgi.p|Nanoce1779_2|535206|organism=Nannochloropsis oceanica|type=mRNA|length=1354bp|location=Sequence derived from alignment at scaffold_1:154304..155657+ (Nannochloropsis oceanica)
CCCCCCCCCCCCCCCGCCCTCCAAGCATCGGCACTGCATGACGCTGCTGC
CACCAGAAATTGATATTGAGTAGTCGACGTCCCACGGAGCGTAACGGCTT
GCCGGGGCAGGGCTCCCTGCAGCGTCCCTGGTCTCCCCTCCCCGCCCGGC
TCAACTGCGCATACCTCCTCACCCTCTCCTCTTTCCGGCACTTCCCAATC
ACAGAATCTCACCACGACTACGGGAATGAACGTGGTTCGTGAAATTCAGC
GGCTCAATGAAAAGGAGCTCCAGCGGGGGACCGCCTCCACCGAAGGGAGT
TGGCATGACCAGTATAAGGACTCTGCGTGGGTATTTGTGGGTAGCTTGCC
CCTCCAATTGAGCGAGGGAGATGTGCTGTGTGTCATGAGTCAATGGGGGG
AGATTGAAGATTTGCATTTGGTTCGAGATAAGGGCACGGGAAAGAGTAAG
GGGTTTGCGTTTGTGAAGTATGAGGACCAGAGGAGCACGATCTTGGCGGT
AGATAATTTCAATGGAGGCAAATTGCTAGATCGAACATTGAGGGTAGATC
ATAAAGAAAAGTATGCGTTGCCGAAAGAGGTGCTGGAGAAGGAGGAGAAC
AAGGAGAAGGCACTAAAGGAGAAAGAGGGAGGGAAGGGAGAGGGGGGAAG
GTGGAAGCCGGGGCATGCGTATGAAGGGAAGAGTTTGGTGGGGGAGCATG
ATTTGAGTAAGGGGGTGGATTTGTTTGCACCGGTGAAGGAGGGAGGTAGG
GAGGGAGGGAAGGAGGGGAAGGAGGAGGTGGATATGGAGGAATTTGTGTC
ATCGGGGAGTGAGGAGGAGGTGATGGGGGGGGATAAGAAGAAGAAGAGGA
AAAAGGAGGAGAAGAACAAGAGGAAGGAGGCCAAAAAGGCGAAGAAAAAG
GAGAAGAAGAAGAAAAGGAAGATGGAAGAGGAGGCCTTGGACCGGCTGGC
GGATGGAAGGGAAGGAGGGAGGGAAGGAAGGAGGGAGGGTGAGAGACGAC
GGACGCAGAGTAGGAGCCGTAGCGGCGATCGAAACGGAGGAGGGAAGGAG
GGAGATGAGGAGAGGAGGAACAGTAGAAGATTTGGCGACAGAGGAGAAAA
AGAGGGAGGAAGGGATGGAGCAAGAGGGCGGTCACCTTCGAGGGAGAGGG
AGAAGGAGAGGGATGGACGGGGGATGCCGCGTGGGAAATGGGAACGTGGG
GAGGAGGCAAGGGGGGAGGAAGAGGATGAGGAAGGACGGCCTTCGTACTC
TAAGAAAGCAGCGGCTGCGTCGCTACCTCTGCCACCACTACCGACCGATG
GACAGCCATCTTGGAGGGGGAAATATGATCCGCATGCACGGCAGGAGCAG
GGGG back to topCoding sequence (CDS) from alignment at scaffold_1:154304..155657+ >mRNA_1270 ID=mRNA_1270|Name=jgi.p|Nanoce1779_2|535206|organism=Nannochloropsis oceanica|type=CDS|length=1254bp|location=Sequence derived from alignment at scaffold_1:154304..155657+ (Nannochloropsis oceanica)
ATGAACGTGGTTCGTGAAATTCAGCGGCTCAATGAAAAGGAGCTCCAGCG
GGGGACCGCCTCCACCGAAGGGAGTTGGCATGACCAGTATAAGGACTCTG
CGTGGGTATTTGTGGGTAGCTTGCCCCTCCAATTGAGCGAGGGAGATGTG
CTGTGTGTCATGAGTCAATGGGGGGAGATTGAAGATTTGCATTTGGTTCG
AGATAAGGGCACGGGAAAGAGTAAGGGGTTTGCGTTTGTGAAGTATGAGG
ACCAGAGGAGCACGATCTTGGCGGTAGATAATTTCAATGGAGGCAAATTG
CTAGATCGAACATTGAGGGTAGATCATAAAGAAAAGTATGCGTTGCCGAA
AGAGGTGCTGGAGAAGGAGGAGAACAAGGAGAAGGCACTAAAGGAGAAAG
AGGGAGGGAAGGGAGAGGGGGGAAGGTGGAAGCCGGGGCATGCGTATGAA
GGGAAGAGTTTGGTGGGGGAGCATGATTTGAGTAAGGGGGTGGATTTGTT
TGCACCGGAAGGAGGCCAAAAAGGCGAAGAAAAAGGAGAAGAAGAAGAAA
AGGAAGATGGAAGAGGAGGCCTTGGACCGGCTGGCGGATGGAAGGGAAGG
AGGGAGGGAAGGAAGGAGGGAGGGTGAATGAACGTGGTTCGTGAAATTCA
GCGGCTCAATGAAAAGGAGCTCCAGCGGGGGACCGCCTCCACCGAAGGGA
GTTGGCATGACCAGTATAAGGACTCTGCGTGGGTATTTGTGGGTAGCTTG
CCCCTCCAATTGAGCGAGGGAGATGTGCTGTGTGTCATGAGTCAATGGGG
GGAGATTGAAGATTTGCATTTGGTTCGAGATAAGGGCACGGGAAAGAGTA
AGGGGTTTGCGTTTGTGAAGTATGAGGACCAGAGGAGCACGATCTTGGCG
GTAGATAATTTCAATGGAGGCAAATTGCTAGATCGAACATTGAGGGTAGA
TCATAAAGAAAAGTATGCGTTGCCGAAAGAGGTGCTGGAGAAGGAGGAGA
ACAAGGAGAAGGCACTAAAGGAGAAAGAGGGAGGGAAGGGAGAGGGGGGA
AGGTGGAAGCCGGGGCATGCGTATGAAGGGAAGAGTTTGGTGGGGGAGCA
TGATTTGAGTAAGGGGGTGGATTTGTTTGCACCGGAAGGAGGCCAAAAAG
GCGAAGAAAAAGGAGAAGAAGAAGAAAAGGAAGATGGAAGAGGAGGCCTT
GGACCGGCTGGCGGATGGAAGGGAAGGAGGGAGGGAAGGAAGGAGGGAGG
GTGA back to top
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