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Properties
| Property Name | Value |
|---|
| TranscriptId | 571634 |
| Track | FilteredModels2 |
| ProteinId | 571548 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_1 | supercontig | scaffold_1:141048..142609 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1265 ID=mRNA_1265|Name=jgi.p|Nanoce1779_2|571548|organism=Nannochloropsis oceanica|type=mRNA|length=1233bp
CCAACTCCCCACTTGTCCACCACTCCTCTTCCCCCGAGTGCTTATACTCC
ACGCAAACCCTCCTCTCCTTCCCTCCCTCCTTCCCGCCCCCACTAGTCTT
AGTAAACACGCCCAGGAATTGCAGCATCTTCGACCTTGCTGCCCCTCCAC
CCCCTCCACCCCCTCCCCCTCTGTCTGCCGGGAACCACTTCCACATGCCC
AGCCCGACCAACCTCTTAACGTCCAGGTCTTCCCTCACATTCGTCGCCTC
CTCATCCACGGCTCCGATCTGCTTCAGCTCGCGTAACAATCGGGACTCTT
GCGTCTTGCGTGCTGCCTTCAGGGTGGATGCCTTGGAACGCGGGGAGGAG
GGAGGAAGGCGCGCAGCAGCCGCCCCAGGTGCAGCACGAGCAGCACGGGC
AGGGGAAGGAGGAATTGAAGCAGAGCCCGAGGCAGCAGCCCGCGTTGTTC
TTTTCGCCTCGCTCTCCATCACTCCTTCCGTTGCCTGTCCCACTTCTTTT
CCTTCTCCCCCTTCCTCCTTCGACTTGTCCCCCTTCTTTTCCCTCTTCTG
CCCAGGTGCTGCTCTACCCGCCGCTACAGCTGCTTCTTCCTCATCCTCCT
CCCCCTCGACCTCCTCCATCTCGGAATCGCTAATTCCTCCCCTCACCGCC
TTGACACTCGCCCCCTTTGCTACGGCCGCTACAGCTGCAGCTGCCGCGCG
CTTTTCTGCTTTTAACAATCGGTACAACAGATCCTTGACCTCTTTCGCAT
GCGCTACTTCCTGCTCGCGTACTTGCCTCCGCAACTTGTGGACTTCGATA
CGGAAAGCATCGTTTTCCTCTTCCAAATCAGCAAAGGTCCGAGGACGATC
CATATCCTCTTCCTCGTCCTCGTATTCACTAGGCATGGGACTTGTACCGT
GATGAGCGGTGGGAGGCTGCGGTACCTGCATTCCATACTCGCAGCCGCTC
TTAGAGATCCCTCCACCATTATCGCCACCGCCCCCTCGTGGCATCAAAGA
CGACATTATCGTCTTCTAGTTCTACTCACAAATACAAATGCAGCCGCAGG
CTGAGGAGCAAATTGTTGTCGAAGCAAGGGAGGAGGGCACTACCACTGGT
GGAAGAGTGCTGCGTGCTAGAGGTGGAAGAAGAACGCTTGCTTCCGTGGC
TTGCCTGTGAACGGCAAAATGTGTGATTGGAAGGCTCCCCTCGAACAAAT
AGTACAAGAGGACGTTTCGAGCTGGCCCATTCT back to topprotein sequence of jgi.p|Nanoce1779_2|571548 >mRNA_1265-protein ID=mRNA_1265-protein|Name=jgi.p|Nanoce1779_2|571548|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp
MPSPTNLLTSRSSLTFVASSSTAPICFSSRNNRDSCVLRAAFRVDALERG
EEGGRRAAAAPGAARAARAGEGGIEAEPEAAARVVLFASLSITPSVACPT
SFPSPPSSFDLSPFFSLFCPGAALPAATAASSSSSSPSTSSISESLIPPL
TALTLAPFATAATAAAAARFSAFNNRYNRSLTSFACATSCSRTCLRNLWT
SIRKASFSSSKSAKVRGRSISSSSSSYSLGMGLVP* back to topmRNA from alignment at scaffold_1:141048..142609- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1265 ID=mRNA_1265|Name=jgi.p|Nanoce1779_2|571548|organism=Nannochloropsis oceanica|type=mRNA|length=1562bp|location=Sequence derived from alignment at scaffold_1:141048..142609- (Nannochloropsis oceanica)
CCAACTCCCCACTTGTCCACCACTCCTCTTCCCCCGAGTGCTTATACTCC
ACGCAAACCCTCCTCTCCTTCCCTCCCTCCTTCCCGCCCCCACTAGTCTT
AGTAAACACGCCCAGGAATTGCAGCATCTTCGACCTTGCTGCCCCTCCAC
CCCCTCCACCCCCTCCCCCTCTGTCTGCCGGGAACCACTTCCACATGCCC
AGCCCGACCAACCTCTTAACGTCCAGGTCTTCCCTCACATTCGTCGCCTC
CTCATCCACGGCTCCGATCTGCTTCAGCTCGCGTAACAATCGGGACTCTT
GCGTCTTGCGTGCTGCCTTCAGGGTGGATGCCTTGGAACGCGGGGAGGAG
GGAGGAAGGCGCGCAGCAGCCGCCCCAGGTGCAGCACGAGCAGCACGGGC
AGGGGAAGGAGGAATTGAAGCAGAGCCCGAGGCAGCAGCCCGCGTTGTTC
TTTTCGCCTCGCTCTCCATCACTCCTTCCGTTGCCTGTCCCACTTCTTTT
CCTTCTCCCCCTTCCTCCTTCGACTTGTCCCCCTTCTTTTCCCTCTTCTG
CCCAGGTGCTGCTCTACCCGCCGCTACAGCTGCTTCTTCCTCATCCTCCT
CCCCCTCGACCTCCTCCATCTCGGAATCGCTAATTCCTCCCCTCACCGCC
TTGACACTCGCCCCCTTTGCTACGGCCGCTACAGCTGCAGCTGCCGCGCG
CTTTTCTGCTTTTAACAATCGGTACAACAGATCCTTGACCTCTTTCGCAT
GCGCTACTTCCTGCTCGCGTACTTGCCTCCGCAACTTGTGGACTTCGATA
CGGAAAGCATCGTTTTCCTCTTCCAAATCAGCAAAGGTCCGAGGACGATC
CATATCCTCTTCCTCGTCCTCGTATTCACTAGGCATGGGACTTGTACCGT
GATGAGCGGTGGGAGGCTGCGGTACCTGCATTCCATACTCGCAGCCGCTC
TTAGAGATCCCTCCACCATTATCGCCACCGCCCCCTCGTGGCATCAAAGA
CGACATTATCGTCTTCTAGTTCTACTCACAAATACAAATGCAGCCGCAGG
CTGAGGAGCAAATTGTTGTCGAAGCAAGGGAGGAGGGCACTACCACTGGT
GGAAGAGTGCTGCGTGCTAGAGGTGGAAGAAGAACGCTTGCTTCCGTGGC
TTGCCTGTGAACTGCGTCCGGAAAAAGGGATATAGGAAAGAGCGTGGTCA
GTGCCATGCCCAGTGGATTCGTGGTGCTTGGTGTGCGCATGAGTCAAAGG
GCGAGATATACAGGGCATTTGTCGTGAAGGCCGGACGAGGAGCACCGTCG
AACGAGACAGAAAGAGGAGGGAAAAGAAGGCGGTGAACCGCGTAAACCGA
CATCATGCCGTAGGGCGGATATAGTCCCCGGGGGGGTCCTTGGTTACCTC
TTTCCCACTCATACCTCGCCCTTCACTGATTGAAAGCACACAAGGAGTAA
GTGCATGTGCCCCTATGTCCCATGCCCTACGTGTTCTTACCGGCAAAATG
TGTGATTGGAAGGCTCCCCTCGAACAAATAGTACAAGAGGACGTTTCGAG
CTGGCCCATTCT back to topCoding sequence (CDS) from alignment at scaffold_1:141048..142609- >mRNA_1265 ID=mRNA_1265|Name=jgi.p|Nanoce1779_2|571548|organism=Nannochloropsis oceanica|type=CDS|length=708bp|location=Sequence derived from alignment at scaffold_1:141048..142609- (Nannochloropsis oceanica)
ATGCCCAGCCCGACCAACCTCTTAACGTCCAGGTCTTCCCTCACATTCGT
CGCCTCCTCATCCACGGCTCCGATCTGCTTCAGCTCGCGTAACAATCGGG
ACTCTTGCGTCTTGCGTGCTGCCTTCAGGGTGGATGCCTTGGAACGCGGG
GAGGAGGGAGGAAGGCGCGCAGCAGCCGCCCCAGGTGCAGCACGAGCAGC
ACGGGCAGGGGAAGGAGGAATTGAAGCAGAGCCCGAGGCAGCAGCCCGCG
TTGTTCTTTTCGCCTCGCTCTCCATCACTCCTTCCGTTGCCTGTCCCACT
TCTTTTCCTTCTCCCCCTTCCTCCTTCGACTTGTCCCCCTTCTTTTCCCT
CTTCTGCCCAGGTGCTGCTCTACCCGCCGCTACAGCTGCTTCTTCCTCAT
CCTCCTCCCCCTCGACCTCCTCCATCTCGGAATCGCTAATTCCTCCCCTC
ACCGCCTTGACACTCGCCCCCTTTGCTACGGCCGCTACAGCTGCAGCTGC
CGCGCGCTTTTCTGCTTTTAACAATCGGTACAACAGATCCTTGACCTCTT
TCGCATGCGCTACTTCCTGCTCGCGTACTTGCCTCCGCAACTTGTGGACT
TCGATACGGAAAGCATCGTTTTCCTCTTCCAAATCAGCAAAGGTCCGAGG
ACGATCCATATCCTCTTCCTCGTCCTCGTATTCACTAGGCATGGGACTTG
TACCGTGA back to top
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