|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 576389 |
| Track | FilteredModels2 |
| ProteinId | 576303 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:331858..333329 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_126 ID=mRNA_126|Name=jgi.p|Nanoce1779_2|576303|organism=Nannochloropsis oceanica|type=mRNA|length=1454bp
GGCATGGCCAACCCCTTCCTCCTCCCTCCCCCCTCTCCTCACCGCCAACG
CCAGCTTCCCTTCCAACTTTCCTACTTTCTTCTTCAACACCTCCACTTCT
CTCCATGCCCTTTTCGCTTCTTCCTTTACCTGTTCGCCCTCTCTCTCAAG
CAGGTTCAGCAAGCGTCGTCGTTCTTCTTCTAATCTGCTCACTTCTTCTT
GAGCATCTTTTAGGGCCTCCCTCTCCACCTCCTTACTCTTCGCCAGCAAA
ATCTCCAAGTCACGGCAGCGTGCCAACAGCTCACTCGAGGATAAAGCAGG
GAAAGAGGAGCGATGCGAACGCATCTCAGACAACTCCTTCTCCAACAACT
CGGCCCGTGCCTCCGCTGCGACTGCTTTCGTCTTCCACTCTGCTTCTGCT
GCTGCTGCTGCTGCTGCTGATGCGAGATCATTCCCTCCTCTTCCTCTCCC
TCTTTCTTTTCCCTCCATCGACATCAAATATCTCACTTCCTCCTGCGCCT
GTGCCCTCTCTCTCTCTGCTGTCTTCAAGGCTCCTTCCAAATTTTCGATA
GTCACCAGACACTCCCTTAGTTGTTCCATCCCCCTCTCTAACCTTCCTCT
CATTGCCTCCACTAACCCCCTTGATGCCCTCCCCTCAGCCTCTATTCTGC
TTTTCAATATTTCCATCATTTTGCTCTCCTTTAACACAGCTCTCGTCCCT
TCCCGCAAAGGACTATCGTCGCTTCTCCTGCTGCTTTTCTTGTCTGAAGC
AGCAGCAGCAGCAACAACCTGCTCTAGCGTGTGTACTTTATTTTGAAGTT
CTCTATTATCAGTTAGAACCCGCTGTAGCGATTCTTCTTCCCTCAATTTA
TCCTCCTGGTATCGTTTTAGCTGTGCCCGGCTCCGTTTCCCTTCTGCGAG
CAAATCGTCATTCTGTGTCTGAAGGCGCCGAACAAGATTTTCTTTCGCTT
GTAAAGATTCATGAACTACCTCGATTTCTTGACTCTGCAATCCAAGGAGA
GAATGGAGGCGTGCAATTTCTTCGTGTAAACTTCTTTTGCTCGTTGTTAC
ACTCGCGGCGCTCACGGCGCTGGCAGCGCTCTGACCGAAGGAGGCTGCGG
ACAGGCGGGGAGGAAAGGAAGTGGAAGGAGCAGATGGTGGTGTATGCGAT
GGTCGTGGTTGACTGCGGCTGGCTTGAACCGCATTGTTGCGGAAAGAGGA
GGAGGAGGACGATGAAGGGCAGCTCCGATGTGAGGCGGACTCGGCGGAGG
CAGTGCCGAACCGAGGCAGGAGGTTGTGATGGTCATTGTCCATGTCTTCC
TTTGGTGGCGACGGCAGATCTTGTTCACTCAAGCCTCCCTCGTCCATCCT
CACCACTACCTCCTCCTCCTCCTCCTCCTCCATCTCATCCTCCGAGGATA
GCAAGGGTCGGGGAGGCTTGAGCCGGCGGGCCTTGAGCGCATGCATTGCT
TCTT back to topprotein sequence of jgi.p|Nanoce1779_2|576303 >mRNA_126-protein ID=mRNA_126-protein|Name=jgi.p|Nanoce1779_2|576303|organism=Nannochloropsis oceanica|type=polypeptide|length=266bp
MPSPQPLFCFSIFPSFCSPLTQLSSLPAKDYRRFSCCFSCLKQQQQQQPA
LACVLYFEVLYYQLEPAVAILLPSIYPPGIVLAVPGSVSLLRANRHSVSE
GAEQDFLSLVKIHELPRFLDSAIQGENGGVQFLRVNFFCSLLHSRRSRRW
QRSDRRRLRTGGEERKWKEQMVVYAMVVVDCGWLEPHCCGKRRRRTMKGS
SDVRRTRRRQCRTEAGGCDGHCPCLPLVATADLVHSSLPRPSSPLPPPPP
PPPSHPPRIARVGEA* back to topmRNA from alignment at scaffold_3:331858..333329+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_126 ID=mRNA_126|Name=jgi.p|Nanoce1779_2|576303|organism=Nannochloropsis oceanica|type=mRNA|length=1472bp|location=Sequence derived from alignment at scaffold_3:331858..333329+ (Nannochloropsis oceanica)
GGCATGGCCAACCCCTTCCTCCTCCCTCCCCCCTCTCCTCACCGCCAACG
CCAGCTTCCCTTCCAACTTTCCTACTTTCTTCTTCAACACCTCCACTTCT
CTCCATGCCCTTTTCGCTTCTTCCTTTACCTGTTCGCCCTCTCTCTCAAG
CAGGTTCAGCAAGCGTCGTCGTTCTTCTTCTAATCTGCTCACTTCTTCTT
GAGCATCTTTTAGGGCCTCCCTCTCCACCTCCTTACTCTTCGCCAGCAAA
ATCTCCAAGTCACGGCAGCGTGCCAACAGCTCACTCGAGGATAAAGCAGG
GAAAGAGGAGCGATGCGAACGCATCTCAGACAACTCCTTCTCCAACAACT
CGGCCCGTGCCTCCGCTGCGACTGCTTTCGTCTTCCACTCTGCTTCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGATGCGAGATCATT
CCCTCCTCTTCCTCTCCCTCTTTCTTTTCCCTCCATCGACATCAAATATC
TCACTTCCTCCTGCGCCTGTGCCCTCTCTCTCTCTGCTGTCTTCAAGGCT
CCTTCCAAATTTTCGATAGTCACCAGACACTCCCTTAGTTGTTCCATCCC
CCTCTCTAACCTTCCTCTCATTGCCTCCACTAACCCCCTTGATGCCCTCC
CCTCAGCCTCTATTCTGCTTTTCAATATTTCCATCATTTTGCTCTCCTTT
AACACAGCTCTCGTCCCTTCCCGCAAAGGACTATCGTCGCTTCTCCTGCT
GCTTTTCTTGTCTGAAGCAGCAGCAGCAGCAACAACCTGCTCTAGCGTGT
GTACTTTATTTTGAAGTTCTCTATTATCAGTTAGAACCCGCTGTAGCGAT
TCTTCTTCCCTCAATTTATCCTCCTGGTATCGTTTTAGCTGTGCCCGGCT
CCGTTTCCCTTCTGCGAGCAAATCGTCATTCTGTGTCTGAAGGCGCCGAA
CAAGATTTTCTTTCGCTTGTAAAGATTCATGAACTACCTCGATTTCTTGA
CTCTGCAATCCAAGGAGAGAATGGAGGCGTGCAATTTCTTCGTGTAAACT
TCTTTTGCTCGTTGTTACACTCGCGGCGCTCACGGCGCTGGCAGCGCTCT
GACCGAAGGAGGCTGCGGACAGGCGGGGAGGAAAGGAAGTGGAAGGAGCA
GATGGTGGTGTATGCGATGGTCGTGGTTGACTGCGGCTGGCTTGAACCGC
ATTGTTGCGGAAAGAGGAGGAGGAGGACGATGAAGGGCAGCTCCGATGTG
AGGCGGACTCGGCGGAGGCAGTGCCGAACCGAGGCAGGAGGTTGTGATGG
TCATTGTCCATGTCTTCCTTTGGTGGCGACGGCAGATCTTGTTCACTCAA
GCCTCCCTCGTCCATCCTCACCACTACCTCCTCCTCCTCCTCCTCCTCCA
TCTCATCCTCCGAGGATAGCAAGGGTCGGGGAGGCTTGAGCCGGCGGGCC
TTGAGCGCATGCATTGCTTCTT back to topCoding sequence (CDS) from alignment at scaffold_3:331858..333329+ >mRNA_126 ID=mRNA_126|Name=jgi.p|Nanoce1779_2|576303|organism=Nannochloropsis oceanica|type=CDS|length=798bp|location=Sequence derived from alignment at scaffold_3:331858..333329+ (Nannochloropsis oceanica)
ATGCCCTCCCCTCAGCCTCTATTCTGCTTTTCAATATTTCCATCATTTTG
CTCTCCTTTAACACAGCTCTCGTCCCTTCCCGCAAAGGACTATCGTCGCT
TCTCCTGCTGCTTTTCTTGTCTGAAGCAGCAGCAGCAGCAACAACCTGCT
CTAGCGTGTGTACTTTATTTTGAAGTTCTCTATTATCAGTTAGAACCCGC
TGTAGCGATTCTTCTTCCCTCAATTTATCCTCCTGGTATCGTTTTAGCTG
TGCCCGGCTCCGTTTCCCTTCTGCGAGCAAATCGTCATTCTGTGTCTGAA
GGCGCCGAACAAGATTTTCTTTCGCTTGTAAAGATTCATGAACTACCTCG
ATTTCTTGACTCTGCAATCCAAGGAGAGAATGGAGGCGTGCAATTTCTTC
GTGTAAACTTCTTTTGCTCGTTGTTACACTCGCGGCGCTCACGGCGCTGG
CAGCGCTCTGACCGAAGGAGGCTGCGGACAGGCGGGGAGGAAAGGAAGTG
GAAGGAGCAGATGGTGGTGTATGCGATGGTCGTGGTTGACTGCGGCTGGC
TTGAACCGCATTGTTGCGGAAAGAGGAGGAGGAGGACGATGAAGGGCAGC
TCCGATGTGAGGCGGACTCGGCGGAGGCAGTGCCGAACCGAGGCAGGAGG
TTGTGATGGTCATTGTCCATGTCTTCCTTTGGTGGCGACGGCAGATCTTG
TTCACTCAAGCCTCCCTCGTCCATCCTCACCACTACCTCCTCCTCCTCCT
CCTCCTCCATCTCATCCTCCGAGGATAGCAAGGGTCGGGGAGGCTTGA back to top
|