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Properties
| Property Name | Value |
|---|
| TranscriptId | 575887 |
| Track | FilteredModels2 |
| ProteinId | 575801 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1529415..1531798 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1216 ID=mRNA_1216|Name=jgi.p|Nanoce1779_2|575801|organism=Nannochloropsis oceanica|type=mRNA|length=1230bp
GGGGAAGGTATCGGGGAAAGGGGGGAGGAGCTGTCTACTCTCCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGCAGCAGCAGC
AGCAGAAGCTGCAGCCGCATCCAGCCTCCGGCATCGGGGAGAGGGCTCCG
ACCAGCACGGGGGCGGGAGGGCATGTGGAAGGGGCCTACGACCCAGAGGA
ATACACCTACATGCTCCCCTCTCTGCCCCTGGACGTCCGGGAGGTGCTCG
CCTTTGTGACTCGCTACCGCCCTCACGACTGCGAGCTCGAGACGCCCCTC
AAATGCTTCATCCCCGACTTCCAGCCGGCTGTGGGCGACATCGACCCCTT
CCTCAAGATGCCGCGGCCGGACGGGGTGGCCGACGAGCTCGGGCGAAAGG
TGGTCGACGAGCCAGCGCCGCGGCAGAGCGATCCCACCATCCTCGAACTC
CAGCTGGTGGCCTTGTCCAAGATCAGGGGCGGCAAGGCAGAGGAGCTCGT
GCAGGTCCGCGGCATTGATGATGCGGCCAAGCGCCCCCGGGAGGTGGACC
GTTGGATCGAGAGCGTCTCGAGCCTGCACAGGAGTCTGCCCCCGACGCTG
GCCACCTACTCCAAGCCCATGCCCGATTTGGACCGGCTGATGCAGGCGTG
GCCCGCGCCCGTCCACGCCGCCGTGGCGGGGGCCAAGGAGAAGTCGAGCG
TCGCTGGTGCCGACACCTTCCTCCCTCAGCTCCTCCCTCCCTCCCTGGAC
CTCTCCCTCCACGAGTACGCCAAGACAGCCTGCGCTCTCTTCGGCATCCC
CGTATACGAGAACGAGAACGGGTAGGTCACCTCCCTCCCTCTCTCCTTCC
CTCCCTCCCTCCCTCCCTCGGTCCCTCCCTCCCATTCTCGTACCTCCCCC
TGGGAAGGCATTTTTCACTTTTACAACTGTCGGTGCAACGTTTGTTCCCT
CGTTGCCTGCCTCCTCCGTCTTCGTCAGCCGGCTCGTCTTAGACCGATTT
ATGTCTCCCCCTCCCTCGCTCCCTTCCTCCTCCCTCGCTTCCTCCCTCTC
AGCCTGCTCGAGTCCCTCCACGCCCTCTTCACCCTCTTCCTGGCCTTGAA
GGAGAGGGAGCAGCCGCCTGCATTTCCAGAGAGGGAAAGGAGGGAGGGAG
GGAGGGAGTGAGAGAAAGAGGGAGGACATGAGGGAAGCGCGAAAGACTGT
TAAGTAAGTGGGCGCGGGCCGAGGAGCGGA back to topprotein sequence of jgi.p|Nanoce1779_2|575801 >mRNA_1216-protein ID=mRNA_1216-protein|Name=jgi.p|Nanoce1779_2|575801|organism=Nannochloropsis oceanica|type=polypeptide|length=205bp
MLPSLPLDVREVLAFVTRYRPHDCELETPLKCFIPDFQPAVGDIDPFLKM
PRPDGVADELGRKVVDEPAPRQSDPTILELQLVALSKIRGGKAEELVQVR
GIDDAAKRPREVDRWIESVSSLHRSLPPTLATYSKPMPDLDRLMQAWPAP
VHAAVAGAKEKSSVAGADTFLPQLLPPSLDLSLHEYAKTACALFGIPVYE
NENG* back to topmRNA from alignment at scaffold_2:1529415..1531798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1216 ID=mRNA_1216|Name=jgi.p|Nanoce1779_2|575801|organism=Nannochloropsis oceanica|type=mRNA|length=2384bp|location=Sequence derived from alignment at scaffold_2:1529415..1531798- (Nannochloropsis oceanica)
GGGGAAGGTATCGGGGAAAGGGGGGAGGAGCTGTCTACTCTCCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGCAGCAGCAGC
AGCAGAAGCTGCAGCCGCATCCAGCCTCCGGCATCGGGGAGAGGGCTCCG
ACCAGCACGGGGGCGGGAGGGCATGTGGAAGGGTGCGAGCAGGAGGGAGG
GAGGGAAGGAAGGGGGTAGGGGATGGGCAGGCTGGGATAGGACCCACTTG
AGGGACGGTGGAGACATTAGGCTGCTGCCGTGTGTAGAAACACCCGGCTC
CTGCCCGGCCTGGGGCTCATTTCATCATGGCATCAATCTCACCCCTCCCT
CCCTCCTTGTCTCGCTCCCTCCCTCCGTCAGGGCCTACGACCCAGAGGAA
TACACCTACATGCTCCCCTCTCTGCCCCTGGACGTCCGGGAGGTGCTCGC
CTTTGTGACTCGGTGAAGGAGGGAGGGAGGGAGGGAGGGAGTAGTGAGGG
AGGGAGGGAGAGAGGGAGGAAGGGGATGAGGCGAGAAAAAAAACTCTCGC
GTCTCACACCATTTTCGAAAACCCTTCGTCTCCTTCCCCCCCTGCCCCCC
TTCCTCCCCCTCCTCGCTTCCTAGCTACCGCCCTCACGACTGCGAGCTCG
AGACGCCCCTCAAATGCTTCATCCCCGACTTCCAGCCGGCTGTGGGCGAC
ATCGACCCCTTCCTCAAGGCGAGTGAGAGGGAGGGCGGGAGGGCGGGGGG
GCTGGTGCAGGTGTCATCACACCAACATTTCCCTTTGCATTTTCTTGTGA
CAGATGCCGCGGCCGGACGGGGTGGCCGACGAGCTCGGGCGAAAGGTAAG
CGCAACCCAATCCAATGCAGAGCCTCCGTGCCTCCCTCCCTGCCTTCTCC
CTCACCTGCTCTCTCCCTCTCTCCTTCCCTCCCTCCTTCCCCCCCTCCTC
TTCCAGGTGGTCGACGAGCCAGCGCCGCGGCAGAGCGATCCCACCATCCT
CGGTACGGCCCCTCTCTCCCTCCTTCCTCTCTTCTTTCCCTTCCGTCCTT
TCTCCCTCCCTCTCTCCCACCTCCCACACCCGTCCTTTTCTGCTTGCTTA
CCTCCGCTCGTCGCCCCCCCCTCCTACTCCCCCTCCGCCAGAACTCCAGC
TGGTGGCCTTGTCCAAGATCAGGGGCGGCAAGGCAGAGGAGCTCGTGCAG
GTAAGGAGGGCAGGCGCGAGGGAGGACGGGCGGGAGGGAGTGGGTGCAAT
GATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAAGGCA
GGGACAAGCAGGTCGGAGCGACCTTGACCACCCCCCTCAGGATCCCTCCA
TCCCTCTCTCCTTTCCTCCCTCCTACCCCCCCTCCCTCCTTCTCGCTCTT
TCGCCCATTTCCTTCAGGTCCGCGGCATTGATGATGCGGCCAAGCGCCCC
CGGGAGGTGGACCGTTGGATCGAGAGCGTCTCGAGCCTGCACAGGAGTCT
GCCCCCGACGCTGGTAGGAAGGGAGGGAGGGAGTGACGGGAGGAAGGAAG
GAGAGAGGGGGGAGGAAAGAAGGGAGGGAGGAGAGTCATCGGGTCTGGGA
GCTTGTCACGTCTGCTCATTCGCCATGCCCCCCTCCCTCCCTCCCTCCCT
CCCCTCCTCCAGGCCACCTACTCCAAGCCCATGCCCGATTTGGACCGGCT
GATGCAGGCGTGGCCCGCGCCCGTCCACGCCGCCGTGGCGGGGGCCAAGG
AGAAGGTGGGGACGGAGGGACGGAGGGACGGAGGGACGGAGGGAGGGAGG
TAGGGGGGGTCCGAACGAACACTCACAGGCTCATCTCTCATGCGCAGTCG
AGCGTCGCTGGTGCCGACACCTTCCTCCCTCAGCTCCTCCCTCCCTCCCT
GGACCTCTCCCTCCACGAGTACGCCAAGACAGCCTGCGCTCTCTTCGGCA
TCCCCGTATACGAGAACGAGAACGGGTAGGTCACCTCCCTCCCTCTCTCC
TTCCCTCCCTCCCTCCCTCCCTCGGTCCCTCCCTCCCATTCTCGTACCTC
CCCCTGGGAAGGCATTTTTCACTTTTACAACTGTCGGTGCAACGTTTGTT
CCCTCGTTGCCTGCCTCCTCCGTCTTCGTCAGCCGGCTCGTCTTAGACCG
ATTTATGTCTCCCCCTCCCTCGCTCCCTTCCTCCTCCCTCGCTTCCTCCC
TCTCAGCCTGCTCGAGTCCCTCCACGCCCTCTTCACCCTCTTCCTGGCCT
TGAAGGAGAGGGAGCAGCCGCCTGCATTTCCAGAGAGGGAAAGGAGGGAG
GGAGGGAGGGAGTGAGAGAAAGAGGGAGGACATGAGGGAAGCGCGAAAGA
CTGTTAAGTAAGTGGGCGCGGGCCGAGGAGCGGA back to topCoding sequence (CDS) from alignment at scaffold_2:1529415..1531798- >mRNA_1216 ID=mRNA_1216|Name=jgi.p|Nanoce1779_2|575801|organism=Nannochloropsis oceanica|type=CDS|length=4920bp|location=Sequence derived from alignment at scaffold_2:1529415..1531798- (Nannochloropsis oceanica)
TCGAGCGTCGCTGGTGCCGACACCTTCCTCCCTCAGCTCCTCCCTCCCTC
CCTGGACCTCTCCCTCCACGAGTACGCCAAGACAGCCTGCGCTCTCTTCG
GCATCCCCGTATACGAGAACGAGAACGGGTAGGCCACCTACTCCAAGCCC
ATGCCCGATTTGGACCGGCTGATGCAGGCGTGGCCCGCGCCCGTCCACGC
CGCCGTGGCGGGGGCCAAGGAGAAGGTCCGCGGCATTGATGATGCGGCCA
AGCGCCCCCGGGAGGTGGACCGTTGGATCGAGAGCGTCTCGAGCCTGCAC
AGGAGTCTGCCCCCGACGCTGAACTCCAGCTGGTGGCCTTGTCCAAGATC
AGGGGCGGCAAGGCAGAGGAGCTCGTGCAGGTGGTCGACGAGCCAGCGCC
GCGGCAGAGCGATCCCACCATCCTCGATGCCGCGGCCGGACGGGGTGGCC
GACGAGCTCGGGCGAAAGCTACCGCCCTCACGACTGCGAGCTCGAGACGC
CCCTCAAATGCTTCATCCCCGACTTCCAGCCGGCTGTGGGCGACATCGAC
CCCTTCCTCAAGATGCTCCCCTCTCTGCCCCTGGACGTCCGGGAGGTGCT
CGCCTTTGTGACTCGTCGAGCGTCGCTGGTGCCGACACCTTCCTCCCTCA
GCTCCTCCCTCCCTCCCTGGACCTCTCCCTCCACGAGTACGCCAAGACAG
CCTGCGCTCTCTTCGGCATCCCCGTATACGAGAACGAGAACGGGTAGGCC
ACCTACTCCAAGCCCATGCCCGATTTGGACCGGCTGATGCAGGCGTGGCC
CGCGCCCGTCCACGCCGCCGTGGCGGGGGCCAAGGAGAAGGTCCGCGGCA
TTGATGATGCGGCCAAGCGCCCCCGGGAGGTGGACCGTTGGATCGAGAGC
GTCTCGAGCCTGCACAGGAGTCTGCCCCCGACGCTGAACTCCAGCTGGTG
GCCTTGTCCAAGATCAGGGGCGGCAAGGCAGAGGAGCTCGTGCAGGTGGT
CGACGAGCCAGCGCCGCGGCAGAGCGATCCCACCATCCTCGATGCCGCGG
CCGGACGGGGTGGCCGACGAGCTCGGGCGAAAGCTACCGCCCTCACGACT
GCGAGCTCGAGACGCCCCTCAAATGCTTCATCCCCGACTTCCAGCCGGCT
GTGGGCGACATCGACCCCTTCCTCAAGATGCTCCCCTCTCTGCCCCTGGA
CGTCCGGGAGGTGCTCGCCTTTGTGACTCGTCGAGCGTCGCTGGTGCCGA
CACCTTCCTCCCTCAGCTCCTCCCTCCCTCCCTGGACCTCTCCCTCCACG
AGTACGCCAAGACAGCCTGCGCTCTCTTCGGCATCCCCGTATACGAGAAC
GAGAACGGGTAGGCCACCTACTCCAAGCCCATGCCCGATTTGGACCGGCT
GATGCAGGCGTGGCCCGCGCCCGTCCACGCCGCCGTGGCGGGGGCCAAGG
AGAAGGTCCGCGGCATTGATGATGCGGCCAAGCGCCCCCGGGAGGTGGAC
CGTTGGATCGAGAGCGTCTCGAGCCTGCACAGGAGTCTGCCCCCGACGCT
GAACTCCAGCTGGTGGCCTTGTCCAAGATCAGGGGCGGCAAGGCAGAGGA
GCTCGTGCAGGTGGTCGACGAGCCAGCGCCGCGGCAGAGCGATCCCACCA
TCCTCGATGCCGCGGCCGGACGGGGTGGCCGACGAGCTCGGGCGAAAGCT
ACCGCCCTCACGACTGCGAGCTCGAGACGCCCCTCAAATGCTTCATCCCC
GACTTCCAGCCGGCTGTGGGCGACATCGACCCCTTCCTCAAGATGCTCCC
CTCTCTGCCCCTGGACGTCCGGGAGGTGCTCGCCTTTGTGACTCGTCGAG
CGTCGCTGGTGCCGACACCTTCCTCCCTCAGCTCCTCCCTCCCTCCCTGG
ACCTCTCCCTCCACGAGTACGCCAAGACAGCCTGCGCTCTCTTCGGCATC
CCCGTATACGAGAACGAGAACGGGTAGGCCACCTACTCCAAGCCCATGCC
CGATTTGGACCGGCTGATGCAGGCGTGGCCCGCGCCCGTCCACGCCGCCG
TGGCGGGGGCCAAGGAGAAGGTCCGCGGCATTGATGATGCGGCCAAGCGC
CCCCGGGAGGTGGACCGTTGGATCGAGAGCGTCTCGAGCCTGCACAGGAG
TCTGCCCCCGACGCTGAACTCCAGCTGGTGGCCTTGTCCAAGATCAGGGG
CGGCAAGGCAGAGGAGCTCGTGCAGGTGGTCGACGAGCCAGCGCCGCGGC
AGAGCGATCCCACCATCCTCGATGCCGCGGCCGGACGGGGTGGCCGACGA
GCTCGGGCGAAAGCTACCGCCCTCACGACTGCGAGCTCGAGACGCCCCTC
AAATGCTTCATCCCCGACTTCCAGCCGGCTGTGGGCGACATCGACCCCTT
CCTCAAGATGCTCCCCTCTCTGCCCCTGGACGTCCGGGAGGTGCTCGCCT
TTGTGACTCGTCGAGCGTCGCTGGTGCCGACACCTTCCTCCCTCAGCTCC
TCCCTCCCTCCCTGGACCTCTCCCTCCACGAGTACGCCAAGACAGCCTGC
GCTCTCTTCGGCATCCCCGTATACGAGAACGAGAACGGGTAGGCCACCTA
CTCCAAGCCCATGCCCGATTTGGACCGGCTGATGCAGGCGTGGCCCGCGC
CCGTCCACGCCGCCGTGGCGGGGGCCAAGGAGAAGGTCCGCGGCATTGAT
GATGCGGCCAAGCGCCCCCGGGAGGTGGACCGTTGGATCGAGAGCGTCTC
GAGCCTGCACAGGAGTCTGCCCCCGACGCTGAACTCCAGCTGGTGGCCTT
GTCCAAGATCAGGGGCGGCAAGGCAGAGGAGCTCGTGCAGGTGGTCGACG
AGCCAGCGCCGCGGCAGAGCGATCCCACCATCCTCGATGCCGCGGCCGGA
CGGGGTGGCCGACGAGCTCGGGCGAAAGCTACCGCCCTCACGACTGCGAG
CTCGAGACGCCCCTCAAATGCTTCATCCCCGACTTCCAGCCGGCTGTGGG
CGACATCGACCCCTTCCTCAAGATGCTCCCCTCTCTGCCCCTGGACGTCC
GGGAGGTGCTCGCCTTTGTGACTCGTCGAGCGTCGCTGGTGCCGACACCT
TCCTCCCTCAGCTCCTCCCTCCCTCCCTGGACCTCTCCCTCCACGAGTAC
GCCAAGACAGCCTGCGCTCTCTTCGGCATCCCCGTATACGAGAACGAGAA
CGGGTAGGCCACCTACTCCAAGCCCATGCCCGATTTGGACCGGCTGATGC
AGGCGTGGCCCGCGCCCGTCCACGCCGCCGTGGCGGGGGCCAAGGAGAAG
GTCCGCGGCATTGATGATGCGGCCAAGCGCCCCCGGGAGGTGGACCGTTG
GATCGAGAGCGTCTCGAGCCTGCACAGGAGTCTGCCCCCGACGCTGAACT
CCAGCTGGTGGCCTTGTCCAAGATCAGGGGCGGCAAGGCAGAGGAGCTCG
TGCAGGTGGTCGACGAGCCAGCGCCGCGGCAGAGCGATCCCACCATCCTC
GATGCCGCGGCCGGACGGGGTGGCCGACGAGCTCGGGCGAAAGCTACCGC
CCTCACGACTGCGAGCTCGAGACGCCCCTCAAATGCTTCATCCCCGACTT
CCAGCCGGCTGTGGGCGACATCGACCCCTTCCTCAAGATGCTCCCCTCTC
TGCCCCTGGACGTCCGGGAGGTGCTCGCCTTTGTGACTCGTCGAGCGTCG
CTGGTGCCGACACCTTCCTCCCTCAGCTCCTCCCTCCCTCCCTGGACCTC
TCCCTCCACGAGTACGCCAAGACAGCCTGCGCTCTCTTCGGCATCCCCGT
ATACGAGAACGAGAACGGGTAGGCCACCTACTCCAAGCCCATGCCCGATT
TGGACCGGCTGATGCAGGCGTGGCCCGCGCCCGTCCACGCCGCCGTGGCG
GGGGCCAAGGAGAAGGTCCGCGGCATTGATGATGCGGCCAAGCGCCCCCG
GGAGGTGGACCGTTGGATCGAGAGCGTCTCGAGCCTGCACAGGAGTCTGC
CCCCGACGCTGAACTCCAGCTGGTGGCCTTGTCCAAGATCAGGGGCGGCA
AGGCAGAGGAGCTCGTGCAGGTGGTCGACGAGCCAGCGCCGCGGCAGAGC
GATCCCACCATCCTCGATGCCGCGGCCGGACGGGGTGGCCGACGAGCTCG
GGCGAAAGCTACCGCCCTCACGACTGCGAGCTCGAGACGCCCCTCAAATG
CTTCATCCCCGACTTCCAGCCGGCTGTGGGCGACATCGACCCCTTCCTCA
AGATGCTCCCCTCTCTGCCCCTGGACGTCCGGGAGGTGCTCGCCTTTGTG
ACTCGTCGAGCGTCGCTGGTGCCGACACCTTCCTCCCTCAGCTCCTCCCT
CCCTCCCTGGACCTCTCCCTCCACGAGTACGCCAAGACAGCCTGCGCTCT
CTTCGGCATCCCCGTATACGAGAACGAGAACGGGTAGGCCACCTACTCCA
AGCCCATGCCCGATTTGGACCGGCTGATGCAGGCGTGGCCCGCGCCCGTC
CACGCCGCCGTGGCGGGGGCCAAGGAGAAGGTCCGCGGCATTGATGATGC
GGCCAAGCGCCCCCGGGAGGTGGACCGTTGGATCGAGAGCGTCTCGAGCC
TGCACAGGAGTCTGCCCCCGACGCTGAACTCCAGCTGGTGGCCTTGTCCA
AGATCAGGGGCGGCAAGGCAGAGGAGCTCGTGCAGGTGGTCGACGAGCCA
GCGCCGCGGCAGAGCGATCCCACCATCCTCGATGCCGCGGCCGGACGGGG
TGGCCGACGAGCTCGGGCGAAAGCTACCGCCCTCACGACTGCGAGCTCGA
GACGCCCCTCAAATGCTTCATCCCCGACTTCCAGCCGGCTGTGGGCGACA
TCGACCCCTTCCTCAAGATGCTCCCCTCTCTGCCCCTGGACGTCCGGGAG
GTGCTCGCCTTTGTGACTCG back to top
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