|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 155671 |
| Track | FilteredModels2 |
| ProteinId | 155585 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1492650..1495879 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1204 ID=mRNA_1204|Name=jgi.p|Nanoce1779_2|155585|organism=Nannochloropsis oceanica|type=mRNA|length=2333bp
AGAGGAAGTTGGTAGCACGACCAGGTCAGCAATGGCCAGCCCTGCGATGG
TCAGGAGTCCCAGATGCTGGTGCCACCACGAGGAAGAGGAAGAGGAGGAA
CCGTTGCCTCCTCTGCTGCTCCTGTCCTGCGCCGCCTAGAAGAAGAAAGA
CGTGTACGTGTGTGAATGTGCCGTGGGCAAGTCGGAGATGATCCGGCAAG
GGGGACTAGTAACAATTCGGCACCAATCCCTCTTACCCATCCAAAGCAAG
GCATATACATCAAATACATCAAACACATTGGCGGTTACCGTCGAGGAGGA
AAAGCGTGCAAGAAGGCGCTGCTGCTGCTGGACCTTTCCGGGGCTACGGA
GGGGACGGGTGGTCGCAAGATGCAGCATCTTGATGGAGCCTTTTGATTCT
TAACGGCTTCAGCGTACGTCTGGGATAGAAGTGTGTGCACTCGAGTAAGA
CATTGTCAGGAAGATATACGTCCAGGCCTTGCTGAACACGACGTGGGCAA
GACCTCAGCAAGTCCAGTAACTAGCACTATTAGACGAAGGTAAATAGCAT
GCGTCTACTTCCGCGAGAGCTGGACAAGCTCCGTCTGCACCAAGCAGGGA
CTCTGGCACAGAAGAGGCTGGCGCGGGGCCAACGTCTCAACCACCCTGAG
ACTAGGGCCTTGATAGCTACAGTGCTGATGGAACTCATCCGGGACGGCAA
GAAATCTTGCGCCGAGCTCATGGACATAGGTCGCTGCATTTTGGGATTCC
GTCAAGTGCTTCCGGGTGTAGGGTGCTTGGTGGATGTGGTGCAGTTAGAA
GCCACCTTCCCTGATGGGACAAAGCTCGTCACCGTACATGACCCAATCGC
GCGCATTGACGGAGACCTGGCCTTGGCGTTGTACGGCAGTTTCTTGCCCG
TTCCGAGCCTTGACTGTTTTGTCTCCCCGTCGCAGAAGGAGGGCGAGGAA
GAGGAAGAGGAGCTGCTTGGGCATATAATGACCCCGCCCGACGGGACGCT
GCACGTGAACGAAGGCCGCACTATCACAGCCCTCCGCGTCACCAACATGG
CCGATAGACCTATCCAGGTTGGCAGCCACTACCACTTTATAGAAACGAAT
CCATACCTGCGCTTCGATCGCAAGAGAGCTTATGGCAAGCGGTTGAACGT
GTTGGCAGGGATGGCGGTGAGGTTTGAGCCGGGTGAGACCAAGACCGTGG
CGCTCGTGGACATAGCGGGAAAGCGCGTGGTGAGGGGAGGGAATGCCTTG
TGTGACGGGCCTGTAGATCCGACAAAGATCGAAGGGATTGTAGCACGGTT
GATTGAGAAGGGCTTTGAGCACCTGCCGCAGGAGGGAAAAGAGGAGGGGG
AGGAAGAGGAGGAGCAGCAAGGTGGTGGAGGTGGCAGTGCGAAAAAGAAG
AGCAAGGGCAATGCCTTGGCTCCCTTGACGGTGAGCCGGGCGCACTACGC
GCATATATATGGCCCGAGCCTGGGAGATGTGGTGCGATTGGGCGATACCT
CTCTGTATGTGCGCGTGGAGAAAGATCTGACGGGCCCGGTGGGGGACGAG
TGCATATTTGGAGGGGGAAAGGTGATAAGGGAGGGCATGGGGCAGGCGAC
GGAGGAAGGCGTAAAGGAGTGCTTGGATACGGTGTTAACAAATGCATTGG
TGGTGGATTGGACGGGGGTGTACAAGGCGGACATTGGCCTGAAGGACCAC
AAAATAGCAGGCATTGGGAAAGCGGGCAATCCCGACGTGATGGCGAACGT
CACTCCGGGTATGGTGGTGGGGGTCAGCACGGATGTCATTGCCGCGGAGG
GCATGATTGTGACGGCTGGGGGGGTGGACACACACATACACTTCATTTGT
CCGCAGCAGGCGGAGGATGCTGTGGCGTCGGGCGTGACGACCTTTGTGGG
GGGCGGGACCGGCCCATCTACCGGCACCGAGGCCACCACTTGCACGCCTG
GCCCCTCGCAGGTCGGCCTGATGCTGCAGAGCACAGACTACATCCCGCTG
AACATTGGGTTGACAGGGAAGGGAAACGCGAGCGTGCCGCAAGGGCTGGA
GGCTCTGGTGGAAGCCGGGGCGATTGGATTAAAGCTCCACGAGGACTGGG
GCACGACACCCGCGGCGATTGACTGACATCCACGTAAATTATTCCTTTCC
CCACCTCTCGTGCCGCTGCCTTGGCCAAACTGCTCTTCCCCGTCCCCTCC
TCCCCACACATGACGTAGTACCGCCCGACCGAGCTGCTGCTGCTGCTGGT
CAAGTGAGGGCCCAGGCAGGAAAGGATCTGGCGCTGGAGGGACGGGCGGA
GGAGGGGGGGAGCGGCGAAAACCACCTGTGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|155585 >mRNA_1204-protein ID=mRNA_1204-protein|Name=jgi.p|Nanoce1779_2|155585|organism=Nannochloropsis oceanica|type=polypeptide|length=526bp
MRLLPRELDKLRLHQAGTLAQKRLARGQRLNHPETRALIATVLMELIRDG
KKSCAELMDIGRCILGFRQVLPGVGCLVDVVQLEATFPDGTKLVTVHDPI
ARIDGDLALALYGSFLPVPSLDCFVSPSQKEGEEEEEELLGHIMTPPDGT
LHVNEGRTITALRVTNMADRPIQVGSHYHFIETNPYLRFDRKRAYGKRLN
VLAGMAVRFEPGETKTVALVDIAGKRVVRGGNALCDGPVDPTKIEGIVAR
LIEKGFEHLPQEGKEEGEEEEEQQGGGGGSAKKKSKGNALAPLTVSRAHY
AHIYGPSLGDVVRLGDTSLYVRVEKDLTGPVGDECIFGGGKVIREGMGQA
TEEGVKECLDTVLTNALVVDWTGVYKADIGLKDHKIAGIGKAGNPDVMAN
VTPGMVVGVSTDVIAAEGMIVTAGGVDTHIHFICPQQAEDAVASGVTTFV
GGGTGPSTGTEATTCTPGPSQVGLMLQSTDYIPLNIGLTGKGNASVPQGL
EALVEAGAIGLKLHEDWGTTPAAID* back to topmRNA from alignment at scaffold_2:1492650..1495879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1204 ID=mRNA_1204|Name=jgi.p|Nanoce1779_2|155585|organism=Nannochloropsis oceanica|type=mRNA|length=3230bp|location=Sequence derived from alignment at scaffold_2:1492650..1495879- (Nannochloropsis oceanica)
AGAGGAAGGTATGTGACGATCTGCATGTTAGTTAGTACACCTTCGCTTCC
ATTATTACCCGCATATATCGCCCCTAATACGTCCTTGCTGAACCCGGCAA
TTTGGTCGTTCTGTCCTCTTGTCATCCCGTCCTCCCTTTTCCTTCCCACT
CCCTCACCTCGATGGTAGTTGGTAGCACGACCAGGTCAGCAATGGCCAGC
CCTGCGATGGTCAGGAGTCCCAGATGCTGGTGCCACCACGAGGAAGAGGA
AGAGGAGGAACCGTTGCCTCCTCTGCTGCTCCTGTCCTGCGCCGCCTAGA
AGAAGAAAGACGTGTACGTGTGTGAATGTGCCGTGGGCAAGTCGGAGATG
ATCCGGCAAGGGGGACTAGTAACAATTCGGCACCAATCCCTCTTACCCAT
CCAAAGCAAGGCATATACATCAAATACATCAAACACATTGGCGGTTACCG
TCGAGGAGGAAAAGCGTGCAAGAAGGCGCTGCTGCTGCTGGACCTTTCCG
GGGCTACGGAGGGGACGGGTGGTCGCAAGATGCAGCATCTTGATGGAGCC
TTTTGATTCTTAACGGCTTCAGCGTACGTCTGGGATAGAAGTGTGTGCAC
TCGAGTGAGTTCGTCGTGATGGGACAGCAGCGGCAGCCAATGTTTATCCT
TGGGACCGAGGACTAGGAGGGCATGCCAAGACGGCGCAAAGGGAAAGCAA
AGTGGGGCCGGATGAGGTCGCCAAGCTTCCACGTTTCATATAAATTCCCC
GCCATGCTTAATGTGCAGCCATACTCTGTGTCTGTGTATATTTGTTTTTG
TGTGGGCACAACCGAAGGCATTCGTCATCGTTTAATTTTCAACTGCTCCC
AACTGCTGCTTCTCTTTCGCCCGTCTCTCGCCTCCAATACACTCACCTTA
CACCTTCTGCTCAACACCCTTACGCCCTTCAGGTAAGACATTGTCAGGAA
GATATACGTCCAGGCCTTGCTGAACACGACGTGGGCAAGACCTCAGGTAT
TTGCTCCATAGCGCGGCGACAATATCTGGATCGCAAATCATCGCGCTTCC
ACGCTTGATGGAAATTCCCGCCGTGCTTAAAGTACCGCCATACCTTGTGT
CTGCGTATGTGAGGAGTGAGTGTGCATCTGTATGAGCATAATCGAAGGCA
TTTGTTGTCGTTTACATTTTACTGCTCCTAACAATTACTCTGTTGCGCTC
TCATATCATACTCAACCCATCTGCCCCTCACCGTTACGCCCTTCAGGTAA
GGCACCGTCTTGGAGACAACGTTAGAGACCTTGATGATCTCAATGAGGGC
ATGATCTTGAGTTATTTGTTTCTACGTGGGGCGACAATTTCTTCCTTTCC
TCCCGCGCCGGCTCCGACTTCATATACCCGCCGCCTCTCACCGCGCTACA
CATAGCAAGTCCAGTAACTAGCACTATTAGACGAAGGTAAATAGCATGCG
TCTACTTCCGCGAGAGCTGGACAAGCTCCGTCTGCACCAAGCAGGGACTC
TGGCACAGAAGAGGCTGGCGCGGGGCCAACGTCTCAACCACCCTGAGACT
AGGGCCTTGATAGCTACAGTGCTGATGGAACTCATCCGGGACGGCAAGAA
ATCTTGCGCCGAGCTCATGGACATAGGTCGCTGCATTTTGGGATTCCGTC
AAGTGCTTCCGGGTGTAGGGTGCTTGGTGGATGTGGTGCAGTTAGAAGCC
ACCTTCCCTGATGGGACAAAGCTCGTCACCGTACATGACCCAATCGCGCG
CATTGACGGAGACCTGGCCTTGGCGTTGTACGGCAGTTTCTTGCCCGTTC
CGAGCCTTGACTGTTTTGTCTCCCCGTCGCAGAAGGAGGGCGAGGAAGAG
GAAGAGGAGCTGCTTGGGCATATAATGACCCCGCCCGACGGGACGCTGCA
CGTGAACGAAGGCCGCACTATCACAGCCCTCCGCGTCACCAACATGGCCG
ATAGACCTATCCAGGTTGGCAGCCACTACCACTTTATAGAAACGAATCCA
TACCTGCGCTTCGATCGCAAGAGAGCTTATGGCAAGCGGTTGAACGTGTT
GGCAGGGATGGCGGTGAGGTTTGAGCCGGGTGAGACCAAGACCGTGGCGC
TCGTGGACATAGCGGGAAAGCGCGTGGTGAGGGGAGGGAATGCCTTGTGT
GACGGGCCTGTAGATCCGACAAAGATCGAAGGGATTGTAGCACGGTTGAT
TGAGAAGGGCTTTGAGCACCTGCCGCAGGAGGGAAAAGAGGAGGGGGAGG
AAGAGGAGGAGCAGCAAGGTGGTGGAGGTGGCAGTGCGAAAAAGAAGAGC
AAGGGCAATGCCTTGGCTCCCTTGACGGTGAGCCGGGCGCACTACGCGCA
TATATATGGCCCGAGCCTGGGAGATGTGGTGCGATTGGGCGATACCTCTC
TGTATGTGCGCGTGGAGAAAGATCTGACGGGCCCGGTGGGGGACGAGTGC
ATATTTGGAGGGGGAAAGGTGATAAGGGAGGGCATGGGGCAGGCGACGGA
GGAAGGCGTAAAGGAGTGCTTGGATACGGTGTTAACAAATGCATTGGTGG
TGGATTGGACGGGGGTGTACAAGGCGGACATTGGCCTGAAGGACCACAAA
ATAGCAGGCATTGGGAAAGCGGGCAATCCCGACGTGATGGCGAACGTCAC
TCCGGGTATGGTGGTGGGGGTCAGCACGGATGTCATTGCCGCGGAGGGCA
TGATTGTGACGGCTGGGGGGGTGGACACACACATACACTTCATTTGTCCG
CAGCAGGCGGAGGATGCTGTGGCGTCGGGCGTGACGACCTTTGTGGGGGG
CGGGACCGGCCCATCTACCGGCACCGAGGCCACCACTTGCACGCCTGGCC
CCTCGCAGGTCGGCCTGATGCTGCAGAGCACAGACTACATCCCGCTGAAC
ATTGGGTTGACAGGGAAGGGAAACGCGAGCGTGCCGCAAGGGCTGGAGGC
TCTGGTGGAAGCCGGGGCGATTGGATTAAAGCTCCACGAGGACTGGGGCA
CGACACCCGCGGCGATTGACTGACATCCACGTAAATTATTCCTTTCCCCA
CCTCTCGTGCCGCTGCCTTGGCCAAACTGCTCTTCCCCGTCCCCTCCTCC
CCACACATGACGTAGTACCGCCCGACCGAGCTGCTGCTGCTGCTGGTCAA
GTGAGGGCCCAGGCAGGAAAGGATCTGGCGCTGGAGGGACGGGCGGAGGA
GGGGGGGAGCGGCGAAAACCACCTGTGTGA back to topCoding sequence (CDS) from alignment at scaffold_2:1492650..1495879- >mRNA_1204 ID=mRNA_1204|Name=jgi.p|Nanoce1779_2|155585|organism=Nannochloropsis oceanica|type=CDS|length=1578bp|location=Sequence derived from alignment at scaffold_2:1492650..1495879- (Nannochloropsis oceanica)
ATGCGTCTACTTCCGCGAGAGCTGGACAAGCTCCGTCTGCACCAAGCAGG
GACTCTGGCACAGAAGAGGCTGGCGCGGGGCCAACGTCTCAACCACCCTG
AGACTAGGGCCTTGATAGCTACAGTGCTGATGGAACTCATCCGGGACGGC
AAGAAATCTTGCGCCGAGCTCATGGACATAGGTCGCTGCATTTTGGGATT
CCGTCAAGTGCTTCCGGGTGTAGGGTGCTTGGTGGATGTGGTGCAGTTAG
AAGCCACCTTCCCTGATGGGACAAAGCTCGTCACCGTACATGACCCAATC
GCGCGCATTGACGGAGACCTGGCCTTGGCGTTGTACGGCAGTTTCTTGCC
CGTTCCGAGCCTTGACTGTTTTGTCTCCCCGTCGCAGAAGGAGGGCGAGG
AAGAGGAAGAGGAGCTGCTTGGGCATATAATGACCCCGCCCGACGGGACG
CTGCACGTGAACGAAGGCCGCACTATCACAGCCCTCCGCGTCACCAACAT
GGCCGATAGACCTATCCAGGTTGGCAGCCACTACCACTTTATAGAAACGA
ATCCATACCTGCGCTTCGATCGCAAGAGAGCTTATGGCAAGCGGTTGAAC
GTGTTGGCAGGGATGGCGGTGAGGTTTGAGCCGGGTGAGACCAAGACCGT
GGCGCTCGTGGACATAGCGGGAAAGCGCGTGGTGAGGGGAGGGAATGCCT
TGTGTGACGGGCCTGTAGATCCGACAAAGATCGAAGGGATTGTAGCACGG
TTGATTGAGAAGGGCTTTGAGCACCTGCCGCAGGAGGGAAAAGAGGAGGG
GGAGGAAGAGGAGGAGCAGCAAGGTGGTGGAGGTGGCAGTGCGAAAAAGA
AGAGCAAGGGCAATGCCTTGGCTCCCTTGACGGTGAGCCGGGCGCACTAC
GCGCATATATATGGCCCGAGCCTGGGAGATGTGGTGCGATTGGGCGATAC
CTCTCTGTATGTGCGCGTGGAGAAAGATCTGACGGGCCCGGTGGGGGACG
AGTGCATATTTGGAGGGGGAAAGGTGATAAGGGAGGGCATGGGGCAGGCG
ACGGAGGAAGGCGTAAAGGAGTGCTTGGATACGGTGTTAACAAATGCATT
GGTGGTGGATTGGACGGGGGTGTACAAGGCGGACATTGGCCTGAAGGACC
ACAAAATAGCAGGCATTGGGAAAGCGGGCAATCCCGACGTGATGGCGAAC
GTCACTCCGGGTATGGTGGTGGGGGTCAGCACGGATGTCATTGCCGCGGA
GGGCATGATTGTGACGGCTGGGGGGGTGGACACACACATACACTTCATTT
GTCCGCAGCAGGCGGAGGATGCTGTGGCGTCGGGCGTGACGACCTTTGTG
GGGGGCGGGACCGGCCCATCTACCGGCACCGAGGCCACCACTTGCACGCC
TGGCCCCTCGCAGGTCGGCCTGATGCTGCAGAGCACAGACTACATCCCGC
TGAACATTGGGTTGACAGGGAAGGGAAACGCGAGCGTGCCGCAAGGGCTG
GAGGCTCTGGTGGAAGCCGGGGCGATTGGATTAAAGCTCCACGAGGACTG
GGGCACGACACCCGCGGCGATTGACTGA back to top
|