|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 575803 |
| Track | FilteredModels2 |
| ProteinId | 575717 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1480756..1482930 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1199 ID=mRNA_1199|Name=jgi.p|Nanoce1779_2|575717|organism=Nannochloropsis oceanica|type=mRNA|length=1493bp
ACAGCCATACACGACACAGCCGCCATGGCGCCTCGTCAACCACAAGCTAT
TGTCAATGAGCACCCCTGTTCCTCTTCCTCCGCCCATGCAACGCCGAGCT
TGGCACCGTCGCACCCCTGCTACTCGGCGGTTCTGGAGGAGGCGCACACA
GTGGGCCTGGAAATCAACCCGTTGAAAGACCAGCCTTTCGGCGCCGAGGT
TGTAGGTCTCGACCTTATGCACAAGCCCATTACGTCGGGGCTTGTCAGCG
TCGTCCGCAACGCCCTCCTCACGCACCAGGTGCTCGTCTTTCGGAACCAG
CAAGAGTTGACGCCGAAGATGCACATCGAGTTCTCACGTCATTTTGGTGT
GCTGTACCAGCATGCCATGGGAGAGTACCGGTTGCCGGCCTATGAGGAGA
TTGTGGTAGTCTCGAATGAGGTGGACGCGGAGGGGAAGCTCATCGGCTTG
AACGGCATCAATGAGGACCAGAGCCGGCACGGGCGTCGGCATTACTGGCA
CAGTGACTTGTCGTACATGCCCGCCCCCCCCATGGGCTCAATGTTGCATA
TGAAGGTCATGCCCGTGGACGGGAGCGGCGACACACTCTTCGCTGACATG
GCGGGGGCCTTCGATTCCCTCCCCTCCGAAAGGCAACAGCAGTTCCTCTC
TCTCAAGGCCAAGCACCTGTTCCAGAAGAACGCCTCTAAGGAAGCCCTCC
AAGCGATGAGCGCGGCAATTACTGCATGTCTCAAGACGGTGCCCGATGTC
TGCCATCCTGTCGTGCGAACCCACCCGGAGACTGGCCGCAAATCCCTGTT
TGTGAGCGAGGGTTTCACCACGCACATCGAGGGGTTGGAGGAGGAGGAAA
GTCAGGCGCTGTTGAAGTGGCTGTACGCCTACACCACGCAAGAGAAATTC
GTGTACCGGCACAAGTGGAAGGAGGGCGACATGGTCTTTTGGGACAATCG
GTCATTGTTGCATTTGGCTACAGGATCTAAACTGCCTCGTACGCTCTACC
GGACTACGATCAAAGGGAACCTTGTCTTTTGAGAGCCGAGAGCGTGAGGG
AGAGTGGGCATGTAAATGTATATAGAGAAGGAAGATTGAGTGGTATCATA
TTTAACGTCGTGTTTTCTCACTATGGATGTGGGAATATGTAGCGATATAC
AGTGGTTCGTGAGGAAAGACATAAAGAGGACACGGAGGTCGTGGGCATGG
TTGACTGGCAAAAGATAAAGATAACGACAAGAGAGGGAATTGTAAAACGT
GAGACCGCCGATCAGAATGGAGGGGATGGGTTTGTGTGGGGCATTTAAGG
GCTAAGGAAATGAACAAAACATGCATAGAGATAGCTGACGCATTCCGGCG
AAGATGTGGTGCAGGTGGTGCTTTGTCTATGGAGAGCAAGGTCACTTGTC
TACGCAACGGATGGGATGAGTTATCAAAAAAAGGCATGGATGAGGGAAAA
ACAAAAGAAGGCAATGGAAAGTGTTTCCAAGAGGTCATGTGGT back to topprotein sequence of jgi.p|Nanoce1779_2|575717 >mRNA_1199-protein ID=mRNA_1199-protein|Name=jgi.p|Nanoce1779_2|575717|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MAPRQPQAIVNEHPCSSSSAHATPSLAPSHPCYSAVLEEAHTVGLEINPL
KDQPFGAEVVGLDLMHKPITSGLVSVVRNALLTHQVLVFRNQQELTPKMH
IEFSRHFGVLYQHAMGEYRLPAYEEIVVVSNEVDAEGKLIGLNGINEDQS
RHGRRHYWHSDLSYMPAPPMGSMLHMKVMPVDGSGDTLFADMAGAFDSLP
SERQQQFLSLKAKHLFQKNASKEALQAMSAAITACLKTVPDVCHPVVRTH
PETGRKSLFVSEGFTTHIEGLEEEESQALLKWLYAYTTQEKFVYRHKWKE
GDMVFWDNRSLLHLATGSKLPRTLYRTTIKGNLVF* back to topmRNA from alignment at scaffold_2:1480756..1482930- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1199 ID=mRNA_1199|Name=jgi.p|Nanoce1779_2|575717|organism=Nannochloropsis oceanica|type=mRNA|length=2175bp|location=Sequence derived from alignment at scaffold_2:1480756..1482930- (Nannochloropsis oceanica)
ACAGCCATACACGACACAGCCGCCATGGCGCCTCGTCAACCACAAGCTAT
TGTCAATGAGCACCCCTGTTCCTCTTCCTCCGCCCATGCAACGCCGAGCT
TGGCACCGTCGCACCCCTGCTACTCGGCGGTTCTGGAGGAGGCGCACACA
GTGGGCCTGGAAATCAACCCGTTGAAAGACCAGCCTTTCGGCGCCGAGGT
TGTAGGTCTCGACCTTATGCACAAGCCCATTACGTCGGGGCTTGTCAGCG
TCGTCCGCAACGCCCTCCTCACGCACCAGGTATGTGTCGTCTCTTACCCG
GCCTCGAAGTTCCGGGAGATAGGCCGAGCATGGCGGGAAGACCCTCGTAT
ACGATCATCGGACCTATCAGAGTCAATACATTCTCACCACTTCTTACACA
TCAGGGAGTGGAGGTTTCTCTGAATGCCAATATCTTGCCTGCCCCTTCGG
TCCTTGCATCCTTGCAACTTGCCCCGCACACTTCAACACAGGGCATGGAC
TTGGTCATGCCCTCCCAGACTGTCGTGCCGCTTGTGATATGTATCTCATA
CATATGGCTAGCACCATGGCGATCTTGACCATCGTCTTCTAACCGCCTGA
TTTTTCCCTCCCTCCTCGCCTCTCCCTCCCCTTGTAGGTGCTCGTCTTTC
GGAACCAGCAAGAGTTGACGCCGAAGATGCACATCGAGTTCTCACGTCAT
TTTGGTGTGCTGTACCAGCATGCCATGGGAGAGTACCGGTTGCCGGCCTA
TGAGGAGATTGTGGTAGTCTCGAATGAGGTGGACGCGGAGGGGAAGCTCA
TCGGCTTGAACGGCATCAATGAGGACCAGAGCCGGCACGGGCGTCGGCAT
TACTGGCACAGTGACTTGTCGTACATGGTGAGCACTCACATCTGAGCGAG
ACGGGTGTGTCTGCATGCAAGCAGTCCTCCTGTTTTAATATTTCCTTTCC
CTCAATCTCACATGTAGTGGCAACTTCGCCCATAGTACCAACACTCTGCT
CATTCTTTGTGTCCCCATGACAACTCACGAACTCCCTTCTCTCCATTTAA
CCCCCCCCTCTCCTCCTCCGCTTACTCCCAAATAGCCCGCCCCCCCCATG
GGCTCAATGTTGCATATGAAGGTCATGCCCGTGGACGGGAGCGGCGACAC
ACTCTTCGCTGACATGGCGGGGGCCTTCGATTCCCTCCCCTCCGAAAGGC
AACAGCAGTTCCTCTCTCTCAAGGCCAAGCACCTGTTCCAGAAGAACGCC
TCTAAGGAAGCCCTCCAAGCGATGAGCGCGGCAATTACTGCATGTCTCAA
GACGGTGCCCGATGTCTGCCATCCTGTCGTGCGAACCCACCCGGAGACTG
GCCGCAAATCCCTGTTTGTGAGCGAGGGTTTCACCACGCACATCGAGGGG
TTGGAGGAGGAGGAAAGTCAGGCGCTGTTGAAGTGGCTGTACGCCTACAC
CACGCAAGAGAAATTCGTGTACCGGCACAAGTGGAAGGAGGGCGACATGG
TCTTTTGGGACAATCGGTCATTGTTGCATTTGGGTATGTGAGGAAGGGAG
GGGGGGAGGGAGGGAGGGTTGGGAGGGACACTCGACGAGGGATGGTCTAA
TAGTTCTATAATTCATTATTTGTTTCTTCTACTTTCCGCACAACTGCAGC
TACAGGATCTAAACTGCCTCGTACGCTCTACCGGACTACGATCAAAGGGA
ACCTTGTCTTTTGAGAGCCGAGAGCGTGAGGGAGAGTGGGCATGTAAATG
TATATAGAGAAGGAAGATTGAGTGGTATCATATTTAACGTCGTGTTTTCT
CACTATGGATGTGGGAATATGTAGCGATATACAGTGGTTCGTGAGGAAAG
ACATAAAGAGGACACGGAGGTCGTGGGCATGGTTGACTGGCAAAAGATAA
AGATAACGACAAGAGAGGGAATTGTAAAACGTGAGACCGCCGATCAGAAT
GGAGGGGATGGGTTTGTGTGGGGCATTTAAGGGCTAAGGAAATGAACAAA
ACATGCATAGAGATAGCTGACGCATTCCGGCGAAGATGTGGTGCAGGTGG
TGCTTTGTCTATGGAGAGCAAGGTCACTTGTCTACGCAACGGATGGGATG
AGTTATCAAAAAAAGGCATGGATGAGGGAAAAACAAAAGAAGGCAATGGA
AAGTGTTTCCAAGAGGTCATGTGGT back to topCoding sequence (CDS) from alignment at scaffold_2:1480756..1482930- >mRNA_1199 ID=mRNA_1199|Name=jgi.p|Nanoce1779_2|575717|organism=Nannochloropsis oceanica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_2:1480756..1482930- (Nannochloropsis oceanica)
CTACAGGATCTAAACTGCCTCGTACGCTCTACCGGACTACGATCAAAGGG
AACCTTGTCTTTTGACCCGCCCCCCCCATGGGCTCAATGTTGCATATGAA
GGTCATGCCCGTGGACGGGAGCGGCGACACACTCTTCGCTGACATGGCGG
GGGCCTTCGATTCCCTCCCCTCCGAAAGGCAACAGCAGTTCCTCTCTCTC
AAGGCCAAGCACCTGTTCCAGAAGAACGCCTCTAAGGAAGCCCTCCAAGC
GATGAGCGCGGCAATTACTGCATGTCTCAAGACGGTGCCCGATGTCTGCC
ATCCTGTCGTGCGAACCCACCCGGAGACTGGCCGCAAATCCCTGTTTGTG
AGCGAGGGTTTCACCACGCACATCGAGGGGTTGGAGGAGGAGGAAAGTCA
GGCGCTGTTGAAGTGGCTGTACGCCTACACCACGCAAGAGAAATTCGTGT
ACCGGCACAAGTGGAAGGAGGGCGACATGGTCTTTTGGGACAATCGGTCA
TTGTTGCATTTGGGTGCTCGTCTTTCGGAACCAGCAAGAGTTGACGCCGA
AGATGCACATCGAGTTCTCACGTCATTTTGGTGTGCTGTACCAGCATGCC
ATGGGAGAGTACCGGTTGCCGGCCTATGAGGAGATTGTGGTAGTCTCGAA
TGAGGTGGACGCGGAGGGGAAGCTCATCGGCTTGAACGGCATCAATGAGG
ACCAGAGCCGGCACGGGCGTCGGCATTACTGGCACAGTGACTTGTCGTAC
ATGATGGCGCCTCGTCAACCACAAGCTATTGTCAATGAGCACCCCTGTTC
CTCTTCCTCCGCCCATGCAACGCCGAGCTTGGCACCGTCGCACCCCTGCT
ACTCGGCGGTTCTGGAGGAGGCGCACACAGTGGGCCTGGAAATCAACCCG
TTGAAAGACCAGCCTTTCGGCGCCGAGGTTGTAGGTCTCGACCTTATGCA
CAAGCCCATTACGTCGGGGCTTGTCAGCGTCGTCCGCAACGCCCTCCTCA
CGCACCAGCTACAGGATCTAAACTGCCTCGTACGCTCTACCGGACTACGA
TCAAAGGGAACCTTGTCTTTTGACCCGCCCCCCCCATGGGCTCAATGTTG
CATATGAAGGTCATGCCCGTGGACGGGAGCGGCGACACACTCTTCGCTGA
CATGGCGGGGGCCTTCGATTCCCTCCCCTCCGAAAGGCAACAGCAGTTCC
TCTCTCTCAAGGCCAAGCACCTGTTCCAGAAGAACGCCTCTAAGGAAGCC
CTCCAAGCGATGAGCGCGGCAATTACTGCATGTCTCAAGACGGTGCCCGA
TGTCTGCCATCCTGTCGTGCGAACCCACCCGGAGACTGGCCGCAAATCCC
TGTTTGTGAGCGAGGGTTTCACCACGCACATCGAGGGGTTGGAGGAGGAG
GAAAGTCAGGCGCTGTTGAAGTGGCTGTACGCCTACACCACGCAAGAGAA
ATTCGTGTACCGGCACAAGTGGAAGGAGGGCGACATGGTCTTTTGGGACA
ATCGGTCATTGTTGCATTTGGGTGCTCGTCTTTCGGAACCAGCAAGAGTT
GACGCCGAAGATGCACATCGAGTTCTCACGTCATTTTGGTGTGCTGTACC
AGCATGCCATGGGAGAGTACCGGTTGCCGGCCTATGAGGAGATTGTGGTA
GTCTCGAATGAGGTGGACGCGGAGGGGAAGCTCATCGGCTTGAACGGCAT
CAATGAGGACCAGAGCCGGCACGGGCGTCGGCATTACTGGCACAGTGACT
TGTCGTACATGATGGCGCCTCGTCAACCACAAGCTATTGTCAATGAGCAC
CCCTGTTCCTCTTCCTCCGCCCATGCAACGCCGAGCTTGGCACCGTCGCA
CCCCTGCTACTCGGCGGTTCTGGAGGAGGCGCACACAGTGGGCCTGGAAA
TCAACCCGTTGAAAGACCAGCCTTTCGGCGCCGAGGTTGTAGGTCTCGAC
CTTATGCACAAGCCCATTACGTCGGGGCTTGTCAGCGTCGTCCGCAACGC
CCTCCTCACGCACCAGCTACAGGATCTAAACTGCCTCGTACGCTCTACCG
GACTACGATCAAAGGGAACCTTGTCTTTTGACCCGCCCCCCCCATGGGCT
CAATGTTGCATATGAAGGTCATGCCCGTGGACGGGAGCGGCGACACACTC
TTCGCTGACATGGCGGGGGCCTTCGATTCCCTCCCCTCCGAAAGGCAACA
GCAGTTCCTCTCTCTCAAGGCCAAGCACCTGTTCCAGAAGAACGCCTCTA
AGGAAGCCCTCCAAGCGATGAGCGCGGCAATTACTGCATGTCTCAAGACG
GTGCCCGATGTCTGCCATCCTGTCGTGCGAACCCACCCGGAGACTGGCCG
CAAATCCCTGTTTGTGAGCGAGGGTTTCACCACGCACATCGAGGGGTTGG
AGGAGGAGGAAAGTCAGGCGCTGTTGAAGTGGCTGTACGCCTACACCACG
CAAGAGAAATTCGTGTACCGGCACAAGTGGAAGGAGGGCGACATGGTCTT
TTGGGACAATCGGTCATTGTTGCATTTGGGTGCTCGTCTTTCGGAACCAG
CAAGAGTTGACGCCGAAGATGCACATCGAGTTCTCACGTCATTTTGGTGT
GCTGTACCAGCATGCCATGGGAGAGTACCGGTTGCCGGCCTATGAGGAGA
TTGTGGTAGTCTCGAATGAGGTGGACGCGGAGGGGAAGCTCATCGGCTTG
AACGGCATCAATGAGGACCAGAGCCGGCACGGGCGTCGGCATTACTGGCA
CAGTGACTTGTCGTACATGATGGCGCCTCGTCAACCACAAGCTATTGTCA
ATGAGCACCCCTGTTCCTCTTCCTCCGCCCATGCAACGCCGAGCTTGGCA
CCGTCGCACCCCTGCTACTCGGCGGTTCTGGAGGAGGCGCACACAGTGGG
CCTGGAAATCAACCCGTTGAAAGACCAGCCTTTCGGCGCCGAGGTTGTAG
GTCTCGACCTTATGCACAAGCCCATTACGTCGGGGCTTGTCAGCGTCGTC
CGCAACGCCCTCCTCACGCACCAGCTACAGGATCTAAACTGCCTCGTACG
CTCTACCGGACTACGATCAAAGGGAACCTTGTCTTTTGACCCGCCCCCCC
CATGGGCTCAATGTTGCATATGAAGGTCATGCCCGTGGACGGGAGCGGCG
ACACACTCTTCGCTGACATGGCGGGGGCCTTCGATTCCCTCCCCTCCGAA
AGGCAACAGCAGTTCCTCTCTCTCAAGGCCAAGCACCTGTTCCAGAAGAA
CGCCTCTAAGGAAGCCCTCCAAGCGATGAGCGCGGCAATTACTGCATGTC
TCAAGACGGTGCCCGATGTCTGCCATCCTGTCGTGCGAACCCACCCGGAG
ACTGGCCGCAAATCCCTGTTTGTGAGCGAGGGTTTCACCACGCACATCGA
GGGGTTGGAGGAGGAGGAAAGTCAGGCGCTGTTGAAGTGGCTGTACGCCT
ACACCACGCAAGAGAAATTCGTGTACCGGCACAAGTGGAAGGAGGGCGAC
ATGGTCTTTTGGGACAATCGGTCATTGTTGCATTTGGGTGCTCGTCTTTC
GGAACCAGCAAGAGTTGACGCCGAAGATGCACATCGAGTTCTCACGTCAT
TTTGGTGTGCTGTACCAGCATGCCATGGGAGAGTACCGGTTGCCGGCCTA
TGAGGAGATTGTGGTAGTCTCGAATGAGGTGGACGCGGAGGGGAAGCTCA
TCGGCTTGAACGGCATCAATGAGGACCAGAGCCGGCACGGGCGTCGGCAT
TACTGGCACAGTGACTTGTCGTACATGATGGCGCCTCGTCAACCACAAGC
TATTGTCAATGAGCACCCCTGTTCCTCTTCCTCCGCCCATGCAACGCCGA
GCTTGGCACCGTCGCACCCCTGCTACTCGGCGGTTCTGGAGGAGGCGCAC
ACAGTGGGCCTGGAAATCAACCCGTTGAAAGACCAGCCTTTCGGCGCCGA
GGTTGTAGGTCTCGACCTTATGCACAAGCCCATTACGTCGGGGCTTGTCA
GCGTCGTCCGCAACGCCCTCCTCACGCACCAG back to top
|