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Properties
| Property Name | Value |
|---|
| TranscriptId | 575769 |
| Track | FilteredModels2 |
| ProteinId | 575683 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1460788..1462885 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1194 ID=mRNA_1194|Name=jgi.p|Nanoce1779_2|575683|organism=Nannochloropsis oceanica|type=mRNA|length=1075bp
CAGAAGAACCATGCGTGTCCTCTCTTTCCTCGCCATGCTCGGCACTGCCG
CCGCTTTTGTCAAGCCCACCCTCCCTTCTGCGGGGTCCCGCACCCGTGCC
GGTGCCCTCCGCATGAACTTGGCTGAGATCGAACTGGAGGCCGGCAAGAC
CTCCCCCTTCCCTGAGGGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGT
CCTTCAAGGAGCTCAAGAAATGGCGCGAAGCCGAGCTCAAACACGGCCGA
GTGGCCATGCTTGCCGTGCTGGGCACCGCGGTGCAGGAGAACTACCACCC
CCTGTGGGGCTTTAACGAGAAGGAGATGGACGGCGCTATCTTCCACTTCC
AGGAAATCCAAAACGTTTACCCCCTTTTCTGGACTGCCCTCCTCTTCATC
ATCGGCGTCATCGAGGCCAAGACCATCGCCACAGGGTGGGACGAGAACAT
GGGCGGCTCCACCACCATCGCCGGCGTGAAGGAGGATTACATCTGCGGCA
ACCTGGGCCTTGACCCCCTCAAGATCATCGAGAACGAGGACGAGGAGGCC
TTCCTCTCCTACCGCAACAAGGAGCTCAACAACGGCCGACTTGCCATGAT
CGCCGCCGCCGGCATCACGATCCAGGAGAAGTTTGTGACCAACGGCCTCC
CCGAGTTCGAATTTCACCGATTCGCCCTCTCTGATGTCTACAACTTCTTC
TTCTAAGCCTTGTCTCGTGCACCGCATCAAGAAAAAAGAAGGGGCCGAGA
GCGATGGAGAGAAGAGGAGAGGGTAGCTTTTTACGCGCGAAAGGGGATTT
AGTAAGGAGTGGTCGGTCTGGGTTTAGCCAGTGTCAAAGTTAAAGTGAGT
GAGAGTGCGTTGTTAGGCCTGGGAAGGTGGTGTGATGGGGGGCGTCTGTA
AGGAGGCCCTGTCTTGTCCCATCATCTTCTGTAATTGTATGTGTGTGTGT
GCGGCGGTCAGAGGACCGCCGCACATGAAAGGGGGGGAGGGAGGGAGGGA
GAGAGGAGGAAGGGAGAGGGATCCAGTGGTTTCGGCCTCTGCTTTTAAAC
CATTTTCTCCCCTTCCCCCTTAAAG back to topprotein sequence of jgi.p|Nanoce1779_2|575683 >mRNA_1194-protein ID=mRNA_1194-protein|Name=jgi.p|Nanoce1779_2|575683|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MRVLSFLAMLGTAAAFVKPTLPSAGSRTRAGALRMNLAEIELEAGKTSPF
PEGFDPLGLSKDKSFKELKKWREAELKHGRVAMLAVLGTAVQENYHPLWG
FNEKEMDGAIFHFQEIQNVYPLFWTALLFIIGVIEAKTIATGWDENMGGS
TTIAGVKEDYICGNLGLDPLKIIENEDEEAFLSYRNKELNNGRLAMIAAA
GITIQEKFVTNGLPEFEFHRFALSDVYNFFF* back to topmRNA from alignment at scaffold_2:1460788..1462885- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1194 ID=mRNA_1194|Name=jgi.p|Nanoce1779_2|575683|organism=Nannochloropsis oceanica|type=mRNA|length=2098bp|location=Sequence derived from alignment at scaffold_2:1460788..1462885- (Nannochloropsis oceanica)
CAGAAGAACCATGCGTGTCCTCTCTTTCCTCGCCATGCTCGGCACTGCCG
CCGCTTTTGTCAAGCCCACCCTCCCTTCTGCGGGGTCCCGCACCCGTGCC
GGTGCCCTCCGGTAAGTGAGTGCTATGTGTGTTCAGGTCCCTGCGCTTGA
CTGCATTACCCGTGTGGTTGAACCCAAAAGACGCGACGGGAAAAACGAAT
ATCAGGCCTGTACGTGTGTTTGTGTACAAGTTGCGGGCCTCTTCCCCCGC
ATCGCCTGCCTTCCCCCCTGTACACCCTAATCAACCTTCTTACAGAGAAG
TTCGGTCGCGCCGTACCTTTGATTTCCCCTGGCATTGAAACCAAGTTCCC
CAAAAGATCGTCCTCTTCCTTTTCCTCCCGTGGCAGATTCCTATACCCAC
ATTCCTCGCTCACAACACCAACACCAACACGAACACGACACCACCATCCC
CATCGTACCTTGAGTCATGACTGGACCGTGCGTTTCTATCACCTCACCGT
CCCTCCTTTCACCCCTCTCCCCCCCGGCCCCATCTTTTCTCCTTCTCGAA
CGAGGCATCTGTTTTACCTTCGCTCACCCTCTCCGCTTCTCCCCTCTTTT
CCCCTCTCCCTCATCCATCAGCATGAACTTGGCTGAGATCGAACTGGAGG
CCGGCAAGACCTCCCCCTTCCCTGAGGGCTTTGACCCCCTTGGCCTGTCC
AAAGACAAGTCCTTCAAGGAGCTCAAGAAATGGCGCGAAGCCGAGCTCAA
ACACGGTACGTCACGCCTTCCCCCCCCCCCCCCCCTTTTTTCATTCCTTC
TTCATTGGTCTCACCACATGCTCTTCTTCCCGTCCCTTCCCTTCTCCTCA
ACCGACAGGCCGAGTGGCCATGCTTGCCGTGCTGGGCACCGCGGTGCAGG
AGAACTACCACCCCCTGTGGGGCTTTAACGAGAAGGAGATGGACGGCGCT
ATCTTCCACTTCCAGGAAATCCAAAACGTTTACCCCCTTTTCTGGACTGC
CCTCCTCTTCATCATCGGCGTCATCGAGGCCAAGACCATCGCCACAGGGT
GGGACGAGAACATGGGCGGCTCCGTGAGTACCTTCCATTCCTTCCTCCCT
TCCTCTCCTTCCCTCCCTCCCTCTCTCTGTCCTCCAAACAGTCAATTGTT
GTTTTCTTCAGTGTATGCTTTTCCCCTTTCCTCCCAACTCACTCCAATAA
CCATCTCGCCCTCCTTCTCTCCCTCCTTTCCCTCCCTATTCACCAGACCA
CCATCGCCGGCGTGAAGGAGGATTACATCTGCGGCAACCTGGGCCTTGAC
CCCCTCAAGATCATCGAGAACGAGGACGAGGAGGCCTTCCTCTCCTACCG
CAACAAGGTGTGCTTTCCCTCCCACCTCCTCTCCCGCCGTCTATGGGCCT
ACAGCTTGTCTAGATCCCATTCTCATCCTGCCCCCTCCCCCCTTCCTCCC
TCTCTCTTTCATGCTACAGGAGCTCAACAACGGCCGACTTGCCATGATCG
CCGCCGCCGGCATCACGATCCAGGTTCGTCCGCCCTTCCCTTCCCTCCCT
CCCTCCCTCCCTCCCCCTTCCTCGCTTTTCCCAACCATCCCTGCCCCCCG
CTCACCCCCTTCCTCCTCTACGATTTCCCCCCCTCCTTGCTCCTACAGGA
GAAGTTTGTGACCAACGGCCTCCCCGAGTTCGAATTTCACCGATTCGCCC
TCTCTGATGTCTACAACTTCTTCTTCTAAGCCTTGTCTCGTGCACCGCAT
CAAGAAAAAAGAAGGGGCCGAGAGCGATGGAGAGAAGAGGAGAGGGTAGC
TTTTTACGCGCGAAAGGGGATTTAGTAAGGAGTGGTCGGTCTGGGTTTAG
CCAGTGTCAAAGTTAAAGTGAGTGAGAGTGCGTTGTTAGGCCTGGGAAGG
TGGTGTGATGGGGGGCGTCTGTAAGGAGGCCCTGTCTTGTCCCATCATCT
TCTGTAATTGTATGTGTGTGTGTGCGGCGGTCAGAGGACCGCCGCACATG
AAAGGGGGGGAGGGAGGGAGGGAGAGAGGAGGAAGGGAGAGGGATCCAGT
GGTTTCGGCCTCTGCTTTTAAACCATTTTCTCCCCTTCCCCCTTAAAG back to topCoding sequence (CDS) from alignment at scaffold_2:1460788..1462885- >mRNA_1194 ID=mRNA_1194|Name=jgi.p|Nanoce1779_2|575683|organism=Nannochloropsis oceanica|type=CDS|length=4176bp|location=Sequence derived from alignment at scaffold_2:1460788..1462885- (Nannochloropsis oceanica)
GAGAAGTTTGTGACCAACGGCCTCCCCGAGTTCGAATTTCACCGATTCGC
CCTCTCTGATGTCTACAACTTCTTCTTCTAAGAGCTCAACAACGGCCGAC
TTGCCATGATCGCCGCCGCCGGCATCACGATCCAGACCACCATCGCCGGC
GTGAAGGAGGATTACATCTGCGGCAACCTGGGCCTTGACCCCCTCAAGAT
CATCGAGAACGAGGACGAGGAGGCCTTCCTCTCCTACCGCAACAAGGCCG
AGTGGCCATGCTTGCCGTGCTGGGCACCGCGGTGCAGGAGAACTACCACC
CCCTGTGGGGCTTTAACGAGAAGGAGATGGACGGCGCTATCTTCCACTTC
CAGGAAATCCAAAACGTTTACCCCCTTTTCTGGACTGCCCTCCTCTTCAT
CATCGGCGTCATCGAGGCCAAGACCATCGCCACAGGGTGGGACGAGAACA
TGGGCGGCTCCCATGAACTTGGCTGAGATCGAACTGGAGGCCGGCAAGAC
CTCCCCCTTCCCTGAGGGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGT
CCTTCAAGGAGCTCAAGAAATGGCGCGAAGCCGAGCTCAAACACGATGCG
TGTCCTCTCTTTCCTCGCCATGCTCGGCACTGCCGCCGCTTTTGTCAAGC
CCACCCTCCCTTCTGCGGGGTCCCGCACCCGTGCCGGTGCCCTCCGGAGA
AGTTTGTGACCAACGGCCTCCCCGAGTTCGAATTTCACCGATTCGCCCTC
TCTGATGTCTACAACTTCTTCTTCTAAGAGCTCAACAACGGCCGACTTGC
CATGATCGCCGCCGCCGGCATCACGATCCAGACCACCATCGCCGGCGTGA
AGGAGGATTACATCTGCGGCAACCTGGGCCTTGACCCCCTCAAGATCATC
GAGAACGAGGACGAGGAGGCCTTCCTCTCCTACCGCAACAAGGCCGAGTG
GCCATGCTTGCCGTGCTGGGCACCGCGGTGCAGGAGAACTACCACCCCCT
GTGGGGCTTTAACGAGAAGGAGATGGACGGCGCTATCTTCCACTTCCAGG
AAATCCAAAACGTTTACCCCCTTTTCTGGACTGCCCTCCTCTTCATCATC
GGCGTCATCGAGGCCAAGACCATCGCCACAGGGTGGGACGAGAACATGGG
CGGCTCCCATGAACTTGGCTGAGATCGAACTGGAGGCCGGCAAGACCTCC
CCCTTCCCTGAGGGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGTCCTT
CAAGGAGCTCAAGAAATGGCGCGAAGCCGAGCTCAAACACGATGCGTGTC
CTCTCTTTCCTCGCCATGCTCGGCACTGCCGCCGCTTTTGTCAAGCCCAC
CCTCCCTTCTGCGGGGTCCCGCACCCGTGCCGGTGCCCTCCGGAGAAGTT
TGTGACCAACGGCCTCCCCGAGTTCGAATTTCACCGATTCGCCCTCTCTG
ATGTCTACAACTTCTTCTTCTAAGAGCTCAACAACGGCCGACTTGCCATG
ATCGCCGCCGCCGGCATCACGATCCAGACCACCATCGCCGGCGTGAAGGA
GGATTACATCTGCGGCAACCTGGGCCTTGACCCCCTCAAGATCATCGAGA
ACGAGGACGAGGAGGCCTTCCTCTCCTACCGCAACAAGGCCGAGTGGCCA
TGCTTGCCGTGCTGGGCACCGCGGTGCAGGAGAACTACCACCCCCTGTGG
GGCTTTAACGAGAAGGAGATGGACGGCGCTATCTTCCACTTCCAGGAAAT
CCAAAACGTTTACCCCCTTTTCTGGACTGCCCTCCTCTTCATCATCGGCG
TCATCGAGGCCAAGACCATCGCCACAGGGTGGGACGAGAACATGGGCGGC
TCCCATGAACTTGGCTGAGATCGAACTGGAGGCCGGCAAGACCTCCCCCT
TCCCTGAGGGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGTCCTTCAAG
GAGCTCAAGAAATGGCGCGAAGCCGAGCTCAAACACGATGCGTGTCCTCT
CTTTCCTCGCCATGCTCGGCACTGCCGCCGCTTTTGTCAAGCCCACCCTC
CCTTCTGCGGGGTCCCGCACCCGTGCCGGTGCCCTCCGGAGAAGTTTGTG
ACCAACGGCCTCCCCGAGTTCGAATTTCACCGATTCGCCCTCTCTGATGT
CTACAACTTCTTCTTCTAAGAGCTCAACAACGGCCGACTTGCCATGATCG
CCGCCGCCGGCATCACGATCCAGACCACCATCGCCGGCGTGAAGGAGGAT
TACATCTGCGGCAACCTGGGCCTTGACCCCCTCAAGATCATCGAGAACGA
GGACGAGGAGGCCTTCCTCTCCTACCGCAACAAGGCCGAGTGGCCATGCT
TGCCGTGCTGGGCACCGCGGTGCAGGAGAACTACCACCCCCTGTGGGGCT
TTAACGAGAAGGAGATGGACGGCGCTATCTTCCACTTCCAGGAAATCCAA
AACGTTTACCCCCTTTTCTGGACTGCCCTCCTCTTCATCATCGGCGTCAT
CGAGGCCAAGACCATCGCCACAGGGTGGGACGAGAACATGGGCGGCTCCC
ATGAACTTGGCTGAGATCGAACTGGAGGCCGGCAAGACCTCCCCCTTCCC
TGAGGGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGTCCTTCAAGGAGC
TCAAGAAATGGCGCGAAGCCGAGCTCAAACACGATGCGTGTCCTCTCTTT
CCTCGCCATGCTCGGCACTGCCGCCGCTTTTGTCAAGCCCACCCTCCCTT
CTGCGGGGTCCCGCACCCGTGCCGGTGCCCTCCGGAGAAGTTTGTGACCA
ACGGCCTCCCCGAGTTCGAATTTCACCGATTCGCCCTCTCTGATGTCTAC
AACTTCTTCTTCTAAGAGCTCAACAACGGCCGACTTGCCATGATCGCCGC
CGCCGGCATCACGATCCAGACCACCATCGCCGGCGTGAAGGAGGATTACA
TCTGCGGCAACCTGGGCCTTGACCCCCTCAAGATCATCGAGAACGAGGAC
GAGGAGGCCTTCCTCTCCTACCGCAACAAGGCCGAGTGGCCATGCTTGCC
GTGCTGGGCACCGCGGTGCAGGAGAACTACCACCCCCTGTGGGGCTTTAA
CGAGAAGGAGATGGACGGCGCTATCTTCCACTTCCAGGAAATCCAAAACG
TTTACCCCCTTTTCTGGACTGCCCTCCTCTTCATCATCGGCGTCATCGAG
GCCAAGACCATCGCCACAGGGTGGGACGAGAACATGGGCGGCTCCCATGA
ACTTGGCTGAGATCGAACTGGAGGCCGGCAAGACCTCCCCCTTCCCTGAG
GGCTTTGACCCCCTTGGCCTGTCCAAAGACAAGTCCTTCAAGGAGCTCAA
GAAATGGCGCGAAGCCGAGCTCAAACACGATGCGTGTCCTCTCTTTCCTC
GCCATGCTCGGCACTGCCGCCGCTTTTGTCAAGCCCACCCTCCCTTCTGC
GGGGTCCCGCACCCGTGCCGGTGCCCTCCGGAGAAGTTTGTGACCAACGG
CCTCCCCGAGTTCGAATTTCACCGATTCGCCCTCTCTGATGTCTACAACT
TCTTCTTCTAAGAGCTCAACAACGGCCGACTTGCCATGATCGCCGCCGCC
GGCATCACGATCCAGACCACCATCGCCGGCGTGAAGGAGGATTACATCTG
CGGCAACCTGGGCCTTGACCCCCTCAAGATCATCGAGAACGAGGACGAGG
AGGCCTTCCTCTCCTACCGCAACAAGGCCGAGTGGCCATGCTTGCCGTGC
TGGGCACCGCGGTGCAGGAGAACTACCACCCCCTGTGGGGCTTTAACGAG
AAGGAGATGGACGGCGCTATCTTCCACTTCCAGGAAATCCAAAACGTTTA
CCCCCTTTTCTGGACTGCCCTCCTCTTCATCATCGGCGTCATCGAGGCCA
AGACCATCGCCACAGGGTGGGACGAGAACATGGGCGGCTCCCATGAACTT
GGCTGAGATCGAACTGGAGGCCGGCAAGACCTCCCCCTTCCCTGAGGGCT
TTGACCCCCTTGGCCTGTCCAAAGACAAGTCCTTCAAGGAGCTCAAGAAA
TGGCGCGAAGCCGAGCTCAAACACGATGCGTGTCCTCTCTTTCCTCGCCA
TGCTCGGCACTGCCGCCGCTTTTGTCAAGCCCACCCTCCCTTCTGCGGGG
TCCCGCACCCGTGCCGGTGCCCTCCG back to top
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