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Properties
| Property Name | Value |
|---|
| TranscriptId | 575733 |
| Track | FilteredModels2 |
| ProteinId | 575647 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1435053..1436831 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1182 ID=mRNA_1182|Name=jgi.p|Nanoce1779_2|575647|organism=Nannochloropsis oceanica|type=mRNA|length=967bp
ACAGACAGGAGCAGTTTAGCAAAGACAGACTCCCAGCTTCCTGATTTTGA
ACGCGAGCCTTCTTCCCTCCCTCCGCACTAGCCCGCCCTCCTCCTCCTCT
GCCTGCAGCCTGCTCCGACCATCACACATTGATAATGGCCATCCTCTACG
CTCTCGTCGCCCGGGGCAAGACTGTATTGGCCGAGTTCACGAGCACAAGC
GGCAACTTTCCCACCGTCACACGTTTTCTCCTCGCGCGAATCGGGGATCG
GGGCATGCCACATGGAGGCGGCGAAGCCGGTGGGCAGAAAATGTCGATCG
TCTACGACCAGCACGTCTTCCATTACGTCGTTGACAGCAGCGGAGGCGGC
CAGGGCCAGTCCTCCTCCTCCTCCTCCACCTCCTCCCCCCTCATCTACCT
GTGCATGGTGGACGATGCCGAGAACAAGCGCCGCCTCGCCTTCCTGTTCC
TTGAAGAGGTTCAACGTCGCTTCATGTCCACATTCGGCGAGGCAGCCTAC
ACGGCCATCGCCTTCGCCATGAACGAGTCCTTCTCCCCCTCCCTCAAGGC
CATGATGGACTTCTACAACGCCGATCCCTCCGCCGACAACCTGCGGCAGC
TGCGGACGAAGATCGATGACACCAAGAGTGTGATGGTGGAGAACATCGAC
CAGGTCCTAGCCAGGGGCGAGAAGATCGAGCTGCTGGTGGACAAGACTGA
CAGGCTCAGCCAGCAGGCCGTGCAGTTCAAAAGACAATCTCGGCGGCTAC
AGCAGAGCATGTGGTGGCGGCGCCTCAACCGGTCCCTCCTCCTCGCTTTT
GTTCTATCCTTAGCTATCTTCCTCTTCACTGCCCTCGGCTGCGGTGGCTT
TGACTTCCACAGGTGCAAAAAATAGTGAAACACGGTCAGAATGCCTTCCC
TCCCTCCCTCCCTCCCTCTCTGCCTGCCTCCCTCCCTCCCCTCCATCCTC
CTATGCTTCAAAGGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|575647 >mRNA_1182-protein ID=mRNA_1182-protein|Name=jgi.p|Nanoce1779_2|575647|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MAILYALVARGKTVLAEFTSTSGNFPTVTRFLLARIGDRGMPHGGGEAGG
QKMSIVYDQHVFHYVVDSSGGGQGQSSSSSSTSSPLIYLCMVDDAENKRR
LAFLFLEEVQRRFMSTFGEAAYTAIAFAMNESFSPSLKAMMDFYNADPSA
DNLRQLRTKIDDTKSVMVENIDQVLARGEKIELLVDKTDRLSQQAVQFKR
QSRRLQQSMWWRRLNRSLLLAFVLSLAIFLFTALGCGGFDFHRCKK* back to topmRNA from alignment at scaffold_2:1435053..1436831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1182 ID=mRNA_1182|Name=jgi.p|Nanoce1779_2|575647|organism=Nannochloropsis oceanica|type=mRNA|length=1779bp|location=Sequence derived from alignment at scaffold_2:1435053..1436831- (Nannochloropsis oceanica)
ACAGACAGGAGCAGTTTAGCAAAGACAGACTCCCAGCTTCCTGATTTTGA
ACGCGAGCCTTCTTCCCTCCCTCCGCACTAGCCCGCCCTCCTCCTCCTCT
GCCTGCAGCCTGCTCCGACCATCACACATTGATAATGGCCATCCTCTACG
CTCTCGTCGCCCGGGGCAAGACTGTATTGGCCGAGTTCACGGTAAGGCGG
ACAGCGAAGAAAAGGAGGACTGGGAAGGGGGTTGCTGCTTCGGGTGATGT
ACATGTGCATTCTGTTGCCCATCCCCTTCCTCTTTTCCTCCCTCTCGTTC
TTGGGACCCAAATAATATCGCAGAGCACAAGCGGCAACTTTCCCACCGTC
ACACGTTTTCTCCTCGCGCGAATCGGGGATCGGGGCATGCCACATGGAGG
CGGCGAAGCCGGGTACGTACATGGGAAGCGGTATATGTATGTGTCCGTCT
CGGATTGCGAAATGGGGCATGCTTCTGCCTACTGGTGTGCCTGTCAGGGT
CTTCTATACCGTATTTGTTCGCTTTCTCCTGCTCCATTTGCTTCAGGTGC
ATGCATATTTAATAACACGTAAATTTCTCCGATCAATCCGTCCGTCGCCT
CAGTGGGCAGAAAATGTCGATCGTCTACGACCAGCACGTCTTCCATTACG
TCGTTGACAGCAGCGGAGGCGGCCAGGGCCAGTCCTCCTCCTCCTCCTCC
ACCTCCTCCCCCCTCATCTACCTGTGCATGGTGGACGATGCCGAGAACAA
GCGCCGCCTCGCCTTCCTGTTCCTTGAAGAGGTTCAACGTCGCTTCATGT
CCACATTCGGCGAGGCAGCCTACACGGTAAGCACCCTTCCTCCCTCTTTT
CCTTCCTTCCTTCCTCCCTCCCTCTTTTCCTTCCTTCCTTCCTCCCTCCC
TCTTTCCCTCCAATCATCCCCAGGCGACCACCCCTACCATAAACGTGCGC
CTCCTTCCCGTCCTCAAGGCTGTGATGGACTCCCACCAATTCAACCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGCCATCGCCTTCGC
CATGAACGAGTCCTTCTCCCCCTCCCTCAAGGCCATGATGGACTTCTACA
ACGCCGATCCCTCCGCCGACAACCTGCGGCAGCTGCGGACGAAGATCGAT
GACACCAAGAGTGTGATGGTGGAGAACATCGACCAGGTAGGGAGGGAGGG
AGGAAGGAGGGAGGGAGGATTGGGCTGCCCATGTGTTTGAGTTCTGAAGA
AGCCGGCCCAAGGGTAAACTAAACAGGCGATCGCATCGGCCGTGTGCCAC
CGCTTACTCCTCCCGCCCTCCCGCCCTCCCTCAAGGTCCTAGCCAGGGGC
GAGAAGATCGAGCTGCTGGTGGACAAGACTGACAGGCTCAGCCAGCAGGC
CGTGCAGTTCAAAAGGTAGGAGGGAGGGAGGGAGCCAAGAAGATCTCATA
TGGCGCCTGGGTGTCTCCACCTTTCTCCTGACGGCCTTTTTCTCCCTCCG
TCCCTCCCTCCTTCCCTTTCTCGCTCCCTCCCTCGCCACCCTTAGACAAT
CTCGGCGGCTACAGCAGAGCATGTGGTGGCGGCGCCTCAACCGGTCCCTC
CTCCTCGCTTTTGTTCTATCCTTAGCTATCTTCCTCTTCACTGCCCTCGG
CTGCGGTGGCTTTGACTTCCACAGGTGCAAAAAATAGTGAAACACGGTCA
GAATGCCTTCCCTCCCTCCCTCCCTCCCTCTCTGCCTGCCTCCCTCCCTC
CCCTCCATCCTCCTATGCTTCAAAGGTAG back to topCoding sequence (CDS) from alignment at scaffold_2:1435053..1436831- >mRNA_1182 ID=mRNA_1182|Name=jgi.p|Nanoce1779_2|575647|organism=Nannochloropsis oceanica|type=CDS|length=4446bp|location=Sequence derived from alignment at scaffold_2:1435053..1436831- (Nannochloropsis oceanica)
ACAATCTCGGCGGCTACAGCAGAGCATGTGGTGGCGGCGCCTCAACCGGT
CCCTCCTCCTCGCTTTTGTTCTATCCTTAGCTATCTTCCTCTTCACTGCC
CTCGGCTGCGGTGGCTTTGACTTCCACAGGTGCAAAAAATAGGTCCTAGC
CAGGGGCGAGAAGATCGAGCTGCTGGTGGACAAGACTGACAGGCTCAGCC
AGCAGGCCGTGCAGTTCAAAAGGCCATCGCCTTCGCCATGAACGAGTCCT
TCTCCCCCTCCCTCAAGGCCATGATGGACTTCTACAACGCCGATCCCTCC
GCCGACAACCTGCGGCAGCTGCGGACGAAGATCGATGACACCAAGAGTGT
GATGGTGGAGAACATCGACCAGTGGGCAGAAAATGTCGATCGTCTACGAC
CAGCACGTCTTCCATTACGTCGTTGACAGCAGCGGAGGCGGCCAGGGCCA
GTCCTCCTCCTCCTCCTCCACCTCCTCCCCCCTCATCTACCTGTGCATGG
TGGACGATGCCGAGAACAAGCGCCGCCTCGCCTTCCTGTTCCTTGAAGAG
GTTCAACGTCGCTTCATGTCCACATTCGGCGAGGCAGCCTACACGAGCAC
AAGCGGCAACTTTCCCACCGTCACACGTTTTCTCCTCGCGCGAATCGGGG
ATCGGGGCATGCCACATGGAGGCGGCGAAGCCGGATGGCCATCCTCTACG
CTCTCGTCGCCCGGGGCAAGACTGTATTGGCCGAGTTCACGACAATCTCG
GCGGCTACAGCAGAGCATGTGGTGGCGGCGCCTCAACCGGTCCCTCCTCC
TCGCTTTTGTTCTATCCTTAGCTATCTTCCTCTTCACTGCCCTCGGCTGC
GGTGGCTTTGACTTCCACAGGTGCAAAAAATAGGTCCTAGCCAGGGGCGA
GAAGATCGAGCTGCTGGTGGACAAGACTGACAGGCTCAGCCAGCAGGCCG
TGCAGTTCAAAAGGCCATCGCCTTCGCCATGAACGAGTCCTTCTCCCCCT
CCCTCAAGGCCATGATGGACTTCTACAACGCCGATCCCTCCGCCGACAAC
CTGCGGCAGCTGCGGACGAAGATCGATGACACCAAGAGTGTGATGGTGGA
GAACATCGACCAGTGGGCAGAAAATGTCGATCGTCTACGACCAGCACGTC
TTCCATTACGTCGTTGACAGCAGCGGAGGCGGCCAGGGCCAGTCCTCCTC
CTCCTCCTCCACCTCCTCCCCCCTCATCTACCTGTGCATGGTGGACGATG
CCGAGAACAAGCGCCGCCTCGCCTTCCTGTTCCTTGAAGAGGTTCAACGT
CGCTTCATGTCCACATTCGGCGAGGCAGCCTACACGAGCACAAGCGGCAA
CTTTCCCACCGTCACACGTTTTCTCCTCGCGCGAATCGGGGATCGGGGCA
TGCCACATGGAGGCGGCGAAGCCGGATGGCCATCCTCTACGCTCTCGTCG
CCCGGGGCAAGACTGTATTGGCCGAGTTCACGACAATCTCGGCGGCTACA
GCAGAGCATGTGGTGGCGGCGCCTCAACCGGTCCCTCCTCCTCGCTTTTG
TTCTATCCTTAGCTATCTTCCTCTTCACTGCCCTCGGCTGCGGTGGCTTT
GACTTCCACAGGTGCAAAAAATAGGTCCTAGCCAGGGGCGAGAAGATCGA
GCTGCTGGTGGACAAGACTGACAGGCTCAGCCAGCAGGCCGTGCAGTTCA
AAAGGCCATCGCCTTCGCCATGAACGAGTCCTTCTCCCCCTCCCTCAAGG
CCATGATGGACTTCTACAACGCCGATCCCTCCGCCGACAACCTGCGGCAG
CTGCGGACGAAGATCGATGACACCAAGAGTGTGATGGTGGAGAACATCGA
CCAGTGGGCAGAAAATGTCGATCGTCTACGACCAGCACGTCTTCCATTAC
GTCGTTGACAGCAGCGGAGGCGGCCAGGGCCAGTCCTCCTCCTCCTCCTC
CACCTCCTCCCCCCTCATCTACCTGTGCATGGTGGACGATGCCGAGAACA
AGCGCCGCCTCGCCTTCCTGTTCCTTGAAGAGGTTCAACGTCGCTTCATG
TCCACATTCGGCGAGGCAGCCTACACGAGCACAAGCGGCAACTTTCCCAC
CGTCACACGTTTTCTCCTCGCGCGAATCGGGGATCGGGGCATGCCACATG
GAGGCGGCGAAGCCGGATGGCCATCCTCTACGCTCTCGTCGCCCGGGGCA
AGACTGTATTGGCCGAGTTCACGACAATCTCGGCGGCTACAGCAGAGCAT
GTGGTGGCGGCGCCTCAACCGGTCCCTCCTCCTCGCTTTTGTTCTATCCT
TAGCTATCTTCCTCTTCACTGCCCTCGGCTGCGGTGGCTTTGACTTCCAC
AGGTGCAAAAAATAGGTCCTAGCCAGGGGCGAGAAGATCGAGCTGCTGGT
GGACAAGACTGACAGGCTCAGCCAGCAGGCCGTGCAGTTCAAAAGGCCAT
CGCCTTCGCCATGAACGAGTCCTTCTCCCCCTCCCTCAAGGCCATGATGG
ACTTCTACAACGCCGATCCCTCCGCCGACAACCTGCGGCAGCTGCGGACG
AAGATCGATGACACCAAGAGTGTGATGGTGGAGAACATCGACCAGTGGGC
AGAAAATGTCGATCGTCTACGACCAGCACGTCTTCCATTACGTCGTTGAC
AGCAGCGGAGGCGGCCAGGGCCAGTCCTCCTCCTCCTCCTCCACCTCCTC
CCCCCTCATCTACCTGTGCATGGTGGACGATGCCGAGAACAAGCGCCGCC
TCGCCTTCCTGTTCCTTGAAGAGGTTCAACGTCGCTTCATGTCCACATTC
GGCGAGGCAGCCTACACGAGCACAAGCGGCAACTTTCCCACCGTCACACG
TTTTCTCCTCGCGCGAATCGGGGATCGGGGCATGCCACATGGAGGCGGCG
AAGCCGGATGGCCATCCTCTACGCTCTCGTCGCCCGGGGCAAGACTGTAT
TGGCCGAGTTCACGACAATCTCGGCGGCTACAGCAGAGCATGTGGTGGCG
GCGCCTCAACCGGTCCCTCCTCCTCGCTTTTGTTCTATCCTTAGCTATCT
TCCTCTTCACTGCCCTCGGCTGCGGTGGCTTTGACTTCCACAGGTGCAAA
AAATAGGTCCTAGCCAGGGGCGAGAAGATCGAGCTGCTGGTGGACAAGAC
TGACAGGCTCAGCCAGCAGGCCGTGCAGTTCAAAAGGCCATCGCCTTCGC
CATGAACGAGTCCTTCTCCCCCTCCCTCAAGGCCATGATGGACTTCTACA
ACGCCGATCCCTCCGCCGACAACCTGCGGCAGCTGCGGACGAAGATCGAT
GACACCAAGAGTGTGATGGTGGAGAACATCGACCAGTGGGCAGAAAATGT
CGATCGTCTACGACCAGCACGTCTTCCATTACGTCGTTGACAGCAGCGGA
GGCGGCCAGGGCCAGTCCTCCTCCTCCTCCTCCACCTCCTCCCCCCTCAT
CTACCTGTGCATGGTGGACGATGCCGAGAACAAGCGCCGCCTCGCCTTCC
TGTTCCTTGAAGAGGTTCAACGTCGCTTCATGTCCACATTCGGCGAGGCA
GCCTACACGAGCACAAGCGGCAACTTTCCCACCGTCACACGTTTTCTCCT
CGCGCGAATCGGGGATCGGGGCATGCCACATGGAGGCGGCGAAGCCGGAT
GGCCATCCTCTACGCTCTCGTCGCCCGGGGCAAGACTGTATTGGCCGAGT
TCACGACAATCTCGGCGGCTACAGCAGAGCATGTGGTGGCGGCGCCTCAA
CCGGTCCCTCCTCCTCGCTTTTGTTCTATCCTTAGCTATCTTCCTCTTCA
CTGCCCTCGGCTGCGGTGGCTTTGACTTCCACAGGTGCAAAAAATAGGTC
CTAGCCAGGGGCGAGAAGATCGAGCTGCTGGTGGACAAGACTGACAGGCT
CAGCCAGCAGGCCGTGCAGTTCAAAAGGCCATCGCCTTCGCCATGAACGA
GTCCTTCTCCCCCTCCCTCAAGGCCATGATGGACTTCTACAACGCCGATC
CCTCCGCCGACAACCTGCGGCAGCTGCGGACGAAGATCGATGACACCAAG
AGTGTGATGGTGGAGAACATCGACCAGTGGGCAGAAAATGTCGATCGTCT
ACGACCAGCACGTCTTCCATTACGTCGTTGACAGCAGCGGAGGCGGCCAG
GGCCAGTCCTCCTCCTCCTCCTCCACCTCCTCCCCCCTCATCTACCTGTG
CATGGTGGACGATGCCGAGAACAAGCGCCGCCTCGCCTTCCTGTTCCTTG
AAGAGGTTCAACGTCGCTTCATGTCCACATTCGGCGAGGCAGCCTACACG
AGCACAAGCGGCAACTTTCCCACCGTCACACGTTTTCTCCTCGCGCGAAT
CGGGGATCGGGGCATGCCACATGGAGGCGGCGAAGCCGGATGGCCATCCT
CTACGCTCTCGTCGCCCGGGGCAAGACTGTATTGGCCGAGTTCACG back to top
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