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Properties
| Property Name | Value |
|---|
| TranscriptId | 154184 |
| Track | FilteredModels2 |
| ProteinId | 154098 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1367768..1370410 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1156 ID=mRNA_1156|Name=jgi.p|Nanoce1779_2|154098|organism=Nannochloropsis oceanica|type=mRNA|length=910bp
GGGAGGGAGGGAGAGAGGGGGAGGGGCGATGAGGAAGGTGTGGAGGGGAG
TCGTGAAGGGGGTAGGATTGCTGGCTTGGCCGGTGGTGGCGGCGGGCTCG
TTACTGGTGGGTCGAAGACGTGAGGTGGATAGGTACAGCGCTGCAGCAGA
GGCGGAGTTTGATGAGTCGGACTCCCACCTTTCATCCTTTCCGTCCTCCC
TCCCTCCCTCGGCCCCTGCCGCAGACGAGGTACTGCGGCGGCCGGCAAAA
GGCACGCCGTCCTACGATACTGCCCTCCTCCACCACTCCCTCTTTTGGGC
AGGAAGCTTTTTCCTCTCCGCCTACCTCCCTCCCTCCTTTCCTTCCTACA
AGTCAAGCTTGGCTCCGATCGTTACGCCTCCCTCCTCCGCTTCTTCGTCT
CCACCCCCTCCATCTCCTACACACCCGCCCACCTCCTTCTTTCCTTCTCC
CTCTTTTCCCTCCTCTTCCTCCTTGCCTCCTCCTCCTTCTTCGTCCCCGA
GGCCTGGATGAAGGTTGCCCCCGCTCCCTCCGCCTTCCCTCCCTCCCTCC
CGCCCTCCCTCCTCAGGGACCGGACAAGGAGGGTGGGGGGAATGGTGGCG
TTGGCAGTATGGCGGCTGCAGTCGACCGTCCTCCTTCTCTCCCTCGTTGC
CTTCCTCCTATGGGCGGTGAGGGACCTGAACCTGTCTGTAGGGGGGGTGA
GGGAGGGAAGGGAGGCGGCGAGGGAAGCCGTGCTTTGGAGTCACGTGGAG
GGAGGAGGAGAGGTGACGGTGGAGGAGGAGGAGGAGGGTGGCGATGACCC
ATGGAGTGGAGCGCGACGGGCATGGACTAGGAGGAATCTGACATCCATTC
TTCCCATCGCTAGGGAGGGAAGGAGGGAGGGAGGGCAGGAAGGACGCGGA
CAAATACTTC back to topprotein sequence of jgi.p|Nanoce1779_2|154098 >mRNA_1156-protein ID=mRNA_1156-protein|Name=jgi.p|Nanoce1779_2|154098|organism=Nannochloropsis oceanica|type=polypeptide|length=212bp
MSRTPTFHPFRPPSLPRPLPQTRYCGGRQKARRPTILPSSTTPSFGQEAF
SSPPTSLPPFLPTSQAWLRSLRLPPPLLRLHPLHLLHTRPPPSFLLPLFP
PLPPCLLLLLRPRGLDEGCPRSLRLPSLPPALPPQGPDKEGGGNGGVGSM
AAAVDRPPSLPRCLPPMGGEGPEPVCRGGEGGKGGGEGSRALESRGGRRR
GDGGGGGGGWR* back to topmRNA from alignment at scaffold_2:1367768..1370410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1156 ID=mRNA_1156|Name=jgi.p|Nanoce1779_2|154098|organism=Nannochloropsis oceanica|type=mRNA|length=2643bp|location=Sequence derived from alignment at scaffold_2:1367768..1370410+ (Nannochloropsis oceanica)
GGGAGGGAGGGAGAGAGGGGGAGGGGCGATGAGGAAGGTGTGGAGGGGAG
TCGTGAAGGGGGTAGGATTGCTGGCTTGGCCGGTGGTGGCGGCGGGCTCG
TTACTGGTGGGTCGAAGACGTGAGGTGGATAGGTACAGCGCTGCAGCAGA
GGCGGAGTTTGATGAGTCGGACTCCCACCTTTCATCCTTTCCGTCCTCCC
TCCCTCCCTCGGCCCCTGCCGCAGACGAGGTACTGCGGCGGCCGGCAAAA
GGTAGAGGGAGTGTGGTCACAGACCTGTGGGTCGTGTGGGGGTGTGGGGG
GAAGGAGGGAGGGAGGGCGGGGGGGAGGAAGGCCAAGGCGGTGGTGGTAG
GACTGGTGGGGCTGAGTGTGTTGACGGCAATGGCGAGGGTGGGGGCTTTG
GTCTGCTTAGGTCAATGGATGCAGCATTCGGTGTTGAGCGAGGCTTTTGA
TTTGGGCACGGGAGGTAAAGAGGGATTGAGGGAGGAAAGGAGGGAAGGAG
GGAGTCGGGTTGTGATATGCAGGCTTCAAACCTGCTCCCCTCCTCGTAAG
ACAAACACGTTTCCCTATCCCACATGTTCCTCCATCCCCCCCCTTCCTCC
CTCACAGGCACGCCGTCCTACGATACTGCCCTCCTCCACCACTCCCTCTT
TTGGGCAGGAAGCTTTTTCCTCTCCGCCTACCTCGCCAACCTGTCATCCC
CTTCCTCCTCCAGCGGTCTCGTCCCCTCCCTCCTTCACCTCCTCTCCTCC
TCTTCCTCCTCCTCTCCGTCGTCCTCTCTCCTTTCTTCACGCTTGGACGA
ACTGGCAGGAGCGGGAGGGAATGATCTCCTTCCCTTCCTCCTCCTCCAAC
ACCTCAAGGCCCGCCTTGCCGGCCTTTCCTCCCTCCTCACCCTTCTCCTC
CTCCCATCCCTCCTCTTCCTCCCCTTCCCCGCCGTCTCCTCCTTCCTTTC
CTCCCTCCCTCCCTTCTTGCACGGGACTCTCCCCTCCTACACGCTCTCCC
TGCAACACCTCCTCCCCTCCCTCCCTCCCTCCCTCCTTTCCTTCCTACAA
GTCAAGCTTGGCTCCGATCGTTACGCCTCCCTCCTCCGCTTCTTCGTCTC
CACCCCCTCCATCTCCTACACACCCGCCCACCTCCTTCTTTCCTTCTCCC
TCTTTTCCCTCCTCTTCCTCCTTGCCTCCTCCTCCTTCTTCGTCCCCGAG
GCCTGGATGAAGGTTGCCCCCGCTCCCTCCGCCTTCCCTCCCTCCCTCCC
GCCCTCCCTCCTCAGGGACCGGACAAGGAGGGTGGGGGGAATGGTGGCGT
TGGCAGTATGGCGGCTGCAGTCGACCGTCCTCCTTCTCTCCCTCGTTGCC
TTCCTCCTATGGGCGGTGAGGGACCTGAACCTGTCTGTAGGGGCGGGGGG
AGAAGGAGGAAGAGGACGAGGGATTGGGGGAGGGAGGGAGTGGGTCTGGT
TGGTGGGAGGGGTGGGGATGATGCTGTGGGAGGGGGTGAGGGAGGGAAGG
GAGGCGGCGAGGGAAGCCGTGCTTTGGAGTCACGTGGAGGGAGGAGGAGT
GCTAGGAGCGGTATACCGAGCTGTGGCGGCAGGTGGAGGAGGAGGAGGAG
GAGGCGGAGGAGGAGGGAAGGAGGAGTGGGAGGGAAGGAGGAGGGAGGGA
AGGAGGAGGGAGGGAGGGATGGACGACTGAGGGGCGGGTGCCTGAGGAGG
GGTTGAAGATGGAGAGGGTGTGGGTGAGGAAAGGGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAAGGAGGGAGGGCGAGTCACGTTGACGACGGCTTTGTATTG
AAGGACATTTCCCTGTAGGTTAGTCCTGGTGAGATATTGCAGGTGTACGG
GGACGAGGGAGCAGGCAAAAGTGTATTGCATTGCGCCCTCGCCTCCCCAC
TTCTTCCTTCCCGCCTTGCCGGCTCCCTGATGCTGCATGGATGGTGGAGG
AGGAGGATTGGAGAGGGAGGGATGGAAGGAGGTCGCACCGAACCTACCGG
AGAGGGAGGAGAGCGCGTGATTCTCGGGGTGGATGGTAGGGGAGAGTGTG
TGGCCCATGTCGATGTTGGTGCTTGTGGCCGCGTCGAGGGCAAGAGGGGA
GAGGGAGAGGGAGAGGGAGAAAGAGAGGGAGAGGGAGAGGCTGGCCCGGG
GGATGGCGGAGAGGACAGCGGGAAGGGTGTACGGGTAGGTGGAGGGATAG
AGGGAATTGGGGAGGGGAAGGAGAGGAGGAGGGAGGGAGGGGAAGGCCGT
TGTCGGCTAGGGAGTGGATAAAAGTGCAGCTGGCGAGGGCGTTGGCGTGG
GAGGGAGGGAGAGGGGGAGGGAGAGGGAGGGGAGGGAGGAGGGAGGGAGA
GGGGGAGGGAGGGCAGGGACAAGGGACGGAATCCCCGATGTGGTTGCCGC
CTGTGACAGGGGGAGGGGGAGAGAGGGGAGGAGGAGGAGGAGGAGGTGAC
GGTGGAGGAGGAGGAGGAGGGTGGCGATGACCCATGGAGTGGAGCGCGAC
GGGCATGGACTAGGAGGAATCTGACATCCATTCTTCCCATCGCTAGGGAG
GGAAGGAGGGAGGGAGGGCAGGAAGGACGCGGACAAATACTTC back to topCoding sequence (CDS) from alignment at scaffold_2:1367768..1370410+ >mRNA_1156 ID=mRNA_1156|Name=jgi.p|Nanoce1779_2|154098|organism=Nannochloropsis oceanica|type=CDS|length=3180bp|location=Sequence derived from alignment at scaffold_2:1367768..1370410+ (Nannochloropsis oceanica)
ATGAGTCGGACTCCCACCTTTCATCCTTTCCGTCCTCCCTCCCTCCCTCG
GCCCCTGCCGCAGACGAGGTACTGCGGCGGCCGGCAAAAGGCACGCCGTC
CTACGATACTGCCCTCCTCCACCACTCCCTCTTTTGGGCAGGAAGCTTTT
TCCTCTCCGCCTACCTCCCTCCCTCCTTTCCTTCCTACAAGTCAAGCTTG
GCTCCGATCGTTACGCCTCCCTCCTCCGCTTCTTCGTCTCCACCCCCTCC
ATCTCCTACACACCCGCCCACCTCCTTCTTTCCTTCTCCCTCTTTTCCCT
CCTCTTCCTCCTTGCCTCCTCCTCCTTCTTCGTCCCCGAGGCCTGGATGA
AGGTTGCCCCCGCTCCCTCCGCCTTCCCTCCCTCCCTCCCGCCCTCCCTC
CTCAGGGACCGGACAAGGAGGGTGGGGGGAATGGTGGCGTTGGCAGTATG
GCGGCTGCAGTCGACCGTCCTCCTTCTCTCCCTCGTTGCCTTCCTCCTAT
GGGCGGTGAGGGACCTGAACCTGTCTGTAGGGGGGGTGAGGGAGGGAAGG
GAGGCGGCGAGGGAAGCCGTGCTTTGGAGTCACGTGGAGGGAGGAGGAGA
GGTGACGGTGGAGGAGGAGGAGGAGGGTGGCGATGAATGAGTCGGACTCC
CACCTTTCATCCTTTCCGTCCTCCCTCCCTCCCTCGGCCCCTGCCGCAGA
CGAGGTACTGCGGCGGCCGGCAAAAGGCACGCCGTCCTACGATACTGCCC
TCCTCCACCACTCCCTCTTTTGGGCAGGAAGCTTTTTCCTCTCCGCCTAC
CTCCCTCCCTCCTTTCCTTCCTACAAGTCAAGCTTGGCTCCGATCGTTAC
GCCTCCCTCCTCCGCTTCTTCGTCTCCACCCCCTCCATCTCCTACACACC
CGCCCACCTCCTTCTTTCCTTCTCCCTCTTTTCCCTCCTCTTCCTCCTTG
CCTCCTCCTCCTTCTTCGTCCCCGAGGCCTGGATGAAGGTTGCCCCCGCT
CCCTCCGCCTTCCCTCCCTCCCTCCCGCCCTCCCTCCTCAGGGACCGGAC
AAGGAGGGTGGGGGGAATGGTGGCGTTGGCAGTATGGCGGCTGCAGTCGA
CCGTCCTCCTTCTCTCCCTCGTTGCCTTCCTCCTATGGGCGGTGAGGGAC
CTGAACCTGTCTGTAGGGGGGGTGAGGGAGGGAAGGGAGGCGGCGAGGGA
AGCCGTGCTTTGGAGTCACGTGGAGGGAGGAGGAGAGGTGACGGTGGAGG
AGGAGGAGGAGGGTGGCGATGAATGAGTCGGACTCCCACCTTTCATCCTT
TCCGTCCTCCCTCCCTCCCTCGGCCCCTGCCGCAGACGAGGTACTGCGGC
GGCCGGCAAAAGGCACGCCGTCCTACGATACTGCCCTCCTCCACCACTCC
CTCTTTTGGGCAGGAAGCTTTTTCCTCTCCGCCTACCTCCCTCCCTCCTT
TCCTTCCTACAAGTCAAGCTTGGCTCCGATCGTTACGCCTCCCTCCTCCG
CTTCTTCGTCTCCACCCCCTCCATCTCCTACACACCCGCCCACCTCCTTC
TTTCCTTCTCCCTCTTTTCCCTCCTCTTCCTCCTTGCCTCCTCCTCCTTC
TTCGTCCCCGAGGCCTGGATGAAGGTTGCCCCCGCTCCCTCCGCCTTCCC
TCCCTCCCTCCCGCCCTCCCTCCTCAGGGACCGGACAAGGAGGGTGGGGG
GAATGGTGGCGTTGGCAGTATGGCGGCTGCAGTCGACCGTCCTCCTTCTC
TCCCTCGTTGCCTTCCTCCTATGGGCGGTGAGGGACCTGAACCTGTCTGT
AGGGGGGGTGAGGGAGGGAAGGGAGGCGGCGAGGGAAGCCGTGCTTTGGA
GTCACGTGGAGGGAGGAGGAGAGGTGACGGTGGAGGAGGAGGAGGAGGGT
GGCGATGAATGAGTCGGACTCCCACCTTTCATCCTTTCCGTCCTCCCTCC
CTCCCTCGGCCCCTGCCGCAGACGAGGTACTGCGGCGGCCGGCAAAAGGC
ACGCCGTCCTACGATACTGCCCTCCTCCACCACTCCCTCTTTTGGGCAGG
AAGCTTTTTCCTCTCCGCCTACCTCCCTCCCTCCTTTCCTTCCTACAAGT
CAAGCTTGGCTCCGATCGTTACGCCTCCCTCCTCCGCTTCTTCGTCTCCA
CCCCCTCCATCTCCTACACACCCGCCCACCTCCTTCTTTCCTTCTCCCTC
TTTTCCCTCCTCTTCCTCCTTGCCTCCTCCTCCTTCTTCGTCCCCGAGGC
CTGGATGAAGGTTGCCCCCGCTCCCTCCGCCTTCCCTCCCTCCCTCCCGC
CCTCCCTCCTCAGGGACCGGACAAGGAGGGTGGGGGGAATGGTGGCGTTG
GCAGTATGGCGGCTGCAGTCGACCGTCCTCCTTCTCTCCCTCGTTGCCTT
CCTCCTATGGGCGGTGAGGGACCTGAACCTGTCTGTAGGGGGGGTGAGGG
AGGGAAGGGAGGCGGCGAGGGAAGCCGTGCTTTGGAGTCACGTGGAGGGA
GGAGGAGAGGTGACGGTGGAGGAGGAGGAGGAGGGTGGCGATGAATGAGT
CGGACTCCCACCTTTCATCCTTTCCGTCCTCCCTCCCTCCCTCGGCCCCT
GCCGCAGACGAGGTACTGCGGCGGCCGGCAAAAGGCACGCCGTCCTACGA
TACTGCCCTCCTCCACCACTCCCTCTTTTGGGCAGGAAGCTTTTTCCTCT
CCGCCTACCTCCCTCCCTCCTTTCCTTCCTACAAGTCAAGCTTGGCTCCG
ATCGTTACGCCTCCCTCCTCCGCTTCTTCGTCTCCACCCCCTCCATCTCC
TACACACCCGCCCACCTCCTTCTTTCCTTCTCCCTCTTTTCCCTCCTCTT
CCTCCTTGCCTCCTCCTCCTTCTTCGTCCCCGAGGCCTGGATGAAGGTTG
CCCCCGCTCCCTCCGCCTTCCCTCCCTCCCTCCCGCCCTCCCTCCTCAGG
GACCGGACAAGGAGGGTGGGGGGAATGGTGGCGTTGGCAGTATGGCGGCT
GCAGTCGACCGTCCTCCTTCTCTCCCTCGTTGCCTTCCTCCTATGGGCGG
TGAGGGACCTGAACCTGTCTGTAGGGGGGGTGAGGGAGGGAAGGGAGGCG
GCGAGGGAAGCCGTGCTTTGGAGTCACGTGGAGGGAGGAGGAGAGGTGAC
GGTGGAGGAGGAGGAGGAGGGTGGCGATGA back to top
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