|
|
Properties
| Property Name | Value |
| TranscriptId | 668168 |
| Track | FilteredModels2 |
| ProteinId | 668082 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:1346682..1349208 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1147 ID=mRNA_1147|Name=jgi.p|Nanoce1779_2|668082|organism=Nannochloropsis oceanica|type=mRNA|length=2361bp CTCAAAGCAATCATAAGCCTCCCTAAATCCCATTTAAACGTCCACACGCC CCACCACAAACCCGCGCCCCGCAAACAGCACCACCTGTAATTGTGCCGTC AAGACGCTGGTTCAGGCGACCGGATTTCAACTCGCACTGCTTCATTTCCT GCCCTGAGTAGAAAACACTCCGCGTCCCTCTCCAGCATGACCCCACCCGC CGAGCAACCCCCGCCGCCCAATGATGAAGATGACCAAGCCGAGGTGGATG AGGGAGGGGACAACATCGAGGACGCCACTAGTCAAGAAAAGATAAAGAAG AAGAAAAGGAAGAAAAAGAAGAAGGCCACAAGCAGTACCAATTGCAGCGT CTACATACCCCCGGCCTTTCAAAGCAATGTGCGTGTCATCATCTCGCCTG CCCTGGGTGTGGGTCGTTGCGCCGTTGCCGCTAGAGCCCTCGCACCCGGC GATCTCATTTTCGAGGAAGAACCTATCGCCTTGGTGAATTTCTCGCGGCA TGCGCACGAGTACTGTGTGTATTGCGGCAAGTACGGGCCAAGAGGCAGTG GCGTTCTTGTCCCCGCCACAGACCTCGTTGTAGATGGTACTGTGATGTGT TGTGCTGCTCCAGCTTGTGCCGCGAGAAGAGGAGCCGCGCATCGGTTGGC GGGAAAAGAGGCCTGGGCACGCATTGCGGAGATTGCAAAGGATGAAAAGA TAGATTCACATTTATTAACCATGGTGTTGCTGTTGATCTGTCAAAGGCAT TTAGCTCGCCATGGGGGAGGGGAAGAGCAGCAGCTGCAACAGAGGTGGAT GGATGTGGATGCGCTGATGGATCATTGGGAAGAGCAGACGGCAGAGTGGA AGGAGTGTGTGGGGAAGGCGATGACGAGGTTGATTCAACATGTGCCGGAG GATGTCCGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATTGAGTGT GGAGGATGCTGCCAGGCTGACGTGTGTGGTGAATGTGAATAGTCACGGGG TAGGGACGACGAGAAGCTTCAATCAGATGCGGGGTCTGGGACTCTTTCCA CTGCTGGCGTGCTTAAACCACTCGTGCCGACCGAATTGTGCCTATGTCTT TGATACGGTGAAAGGGGGAAATATAGGGGTGAGGGCATTAGAGGCCATTG AAGAGGGTGAAGAGCTCTTCGTGCATTATACCAACTTGTTGGTGTCGCGG AAGGTGAGAAAAGAGGAACTGCGGACGACCAAGTACTTTGATTGTGGGTG TCGGCGGTGTGAGGGGGAGGGAGGGAGGGAAGGAGAGGCGGACCGCTTGA TGGCGGCGTTGTGTTGTGCAGCGTGTGGGTTGGAGGGGAGGGTGCTGTCG CCGGGGGAGGAACCGGCAGCAGCAGCGAGTGAAGCAGCAGCCACGGCATT GTTGCGTTTGGCGGAAGAGGAGGAGGAAGTGGACGGGACGAAAGGAAAGA AGAAGAAAGGAAAAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAGGAGAGGGGAAAGATGGGGGAGAGAAGAACGAGGGAGG GACAAAGGGGAATTGGGGAACGACAGGTGTGAACGATGGCATGGCAGGGC TAACGCTTGAGGAAGGGGAAGGGGGAGTGGAGGAAAGCAAGGGGGGAAAG ACGAAAGAGAAAGACGGGCTGGGAAAAGAAGGGAGTGAAGAGAGCAAGCC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGCGTCATCCC ATCGCTGCAGTCTGTGCTCCGCTGTCTTTAGCGTGCAGGAGATTTCCGAG TACCTGGAACGGGTGGAGGTTGGGACGGTGCAAGGACAGCTGTTGCTTCG GTCCCAGACCGACGGCGCGGCGAAGCAGCATTTGGAAGACCTCTTGACAC TGCACACGGCCAAGGCGAAGGAGGGGGGAAGGGCGGGAGGGAGGGAGAGA GGGATGCCACAGGTGGTCCGGGGAACGCCGTCGCGGTTGAGGTTGCACCC GAAGCATTATCTCTTGGTCGAGCCGGTAGCCATGTTGATTAATCTGGACG TGAAGCTGAAAGAGCACGCAGCGGCGATCACGCACTTCCGTCGTATGATC GAGACCATGGACAACGTCCTTCCTCCCCTCTTTCCCGAGAAGGGGGACTA CCTCCACGGGCTTGCCGCCTGTCTGTACGAATACCTGCGGCCCCGGCTGG GTATGTTACCACCAAGGAGTGCGATGATGATCAAGGCCGAGATGAAAGTG CTCTTCGGGCGGGCGTGGGAAGTACGGAGGGTGGGCTTAGGGGAGGGGCA CCCGTTGACGATGGAGAGCAGGGAAATGGTGGAGGCCATTGCATCGGCAG GGCAGGGGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|668082 >mRNA_1147-protein ID=mRNA_1147-protein|Name=jgi.p|Nanoce1779_2|668082|organism=Nannochloropsis oceanica|type=polypeptide|length=725bp MTPPAEQPPPPNDEDDQAEVDEGGDNIEDATSQEKIKKKKRKKKKKATSS TNCSVYIPPAFQSNVRVIISPALGVGRCAVAARALAPGDLIFEEEPIALV NFSRHAHEYCVYCGKYGPRGSGVLVPATDLVVDGTVMCCAAPACAARRGA AHRLAGKEAWARIAEIAKDEKIDSHLLTMVLLLICQRHLARHGGGEEQQL QQRWMDVDALMDHWEEQTAEWKECVGKAMTRLIQHVPEDVRGGGGGGGGG GGLSVEDAARLTCVVNVNSHGVGTTRSFNQMRGLGLFPLLACLNHSCRPN CAYVFDTVKGGNIGVRALEAIEEGEELFVHYTNLLVSRKVRKEELRTTKY FDCGCRRCEGEGGREGEADRLMAALCCAACGLEGRVLSPGEEPAAAASEA AATALLRLAEEEEEVDGTKGKKKKGKGKGGGGGGGGGGGGGGGEGKDGGE KNEGGTKGNWGTTGVNDGMAGLTLEEGEGGVEESKGGKTKEKDGLGKEGS EESKPAAAAAAAAAAAAAASSHRCSLCSAVFSVQEISEYLERVEVGTVQG QLLLRSQTDGAAKQHLEDLLTLHTAKAKEGGRAGGRERGMPQVVRGTPSR LRLHPKHYLLVEPVAMLINLDVKLKEHAAAITHFRRMIETMDNVLPPLFP EKGDYLHGLAACLYEYLRPRLGMLPPRSAMMIKAEMKVLFGRAWEVRRVG LGEGHPLTMESREMVEAIASAGQG* back to topmRNA from alignment at scaffold_2:1346682..1349208+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1147 ID=mRNA_1147|Name=jgi.p|Nanoce1779_2|668082|organism=Nannochloropsis oceanica|type=mRNA|length=2527bp|location=Sequence derived from alignment at scaffold_2:1346682..1349208+ (Nannochloropsis oceanica) CTCAAAGCAATCATAAGCCTCCCTAAATCCCATTTAAACGTCCACACGCC
CCACCACAAACCCGCGCCCCGCAAACAGCACCACCTGTAATTGTGCCGTC
AAGACGCTGGTTCAGGCGACCGGATTTCAACTCGCACTGCTTCATTTCCT
GCCCTGAGTAGAAAACACTCCGCGTCCCTCTCCAGCATGACCCCACCCGC
CGAGCAACCCCCGCCGCCCAATGATGAAGATGACCAAGCCGAGGTGGATG
AGGGAGGGGACAACATCGAGGACGCCACTAGTCAAGAAAAGATAAAGAAG
AAGAAAAGGAAGAAAAAGAAGAAGGCCACAAGCAGTACCAATTGCAGCGT
CTACATACCCCCGGCCTTTCAAAGCAATGTGCGTGTCATCATCTCGCCTG
CCCTGGGTGTGGGTCGTTGCGCCGTTGCCGCTAGAGCCCTCGCACCCGGC
GATCTCATTTTCGAGGAAGAACCTATCGCCTTGGTGAATTTCTCGCGGCA
TGCGCACGAGTACTGTGTGTATTGCGGCAAGTACGGGCCAAGAGGCAGTG
GCGTTCTTGTCCCCGCCACAGACCTCGTTGTAGATGGTACTGTGATGTGT
TGTGCTGCTCCAGCTTGTGCCGCGAGAAGAGGAGCCGCGCATCGGTTGGC
GGGAAAAGAGGCCTGGGCACGCATTGCGGAGATTGCAAAGGATGAAAAGA
TAGATTCACATTTATTAACCATGGTGTTGCTGTTGATCTGTCAAAGGCAT
TTAGCTCGCCATGGGGGAGGGGAAGAGCAGCAGCTGCAACAGAGGTGGAT
GGATGTGGATGCGCTGATGGATCATTGGGAAGAGCAGACGGCAGAGTGGA
AGGAGTGTGTGGGGAAGGCGATGACGAGGTTGATTCAACATGTGCCGGAG
GATGTCCGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATTGAGTGT
GGAGGATGCTGCCAGGCTGACGTGTGTGGTGAATGTGAATAGTCACGGGG
TAGGGACGACGAGAAGCTTCAATCAGATGCGGGGTCTGGGACTCTTTCCA
CTGCTGGCGTGCTTAAACCACTCGTGCCGACCGAATTGTGCCTATGTCTT
TGATACGGTGAAAGGGGGAAATATAGGGGTGAGGGCATTAGAGGCCATTG
AAGAGGGTGAAGAGCTCTTCGTGCATTATACCAACTTGTTGGTGTCGCGG
AAGGTGAGAAAAGAGGAACTGCGGACGACCAAGTACTTTGATTGTGGGTG
TCGGCGGTGTGAGGGGGAGGGAGGGAGGGAAGGAGAGGCGGACCGCTTGA
TGGCGGCGTTGTGTTGTGCAGCGTGTGGGTTGGAGGGGAGGGTGCTGTCG
CCGGGGGAGGAACCGGCAGCAGCAGCGAGTGAAGCAGCAGCCACGGCATT
GTTGCGTTTGGCGGAAGAGGAGGAGGAAGTGGACGGGACGAAAGGAAAGA
AGAAGAAAGGAAAAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGAGGGGAAAGATGGGGGAGAGAAGAACGAGGGAGG
GACAAAGGGGAATTGGGGAACGACAGGTGTGAACGATGGCATGGCAGGGC
TAACGCTTGAGGAAGGGGAAGGGGGAGTGGAGGAAAGCAAGGGGGGAAAG
ACGAAAGAGAAAGACGGGCTGGGAAAAGAAGGGAGTGAAGAGAGCAAGCC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCAGCGTCATCCC
ATCGCTGCAGTCTGTGCTCCGCTGTCTTTAGCGTGCAGGAGATTTCCGAG
TACCTGGAACGGGTGGAGGTTGGGACGGTGCAAGGACAGCTGTTGCTTCG
GTCCCAGACCGACGGCGCGGCGAAGCAGCATTTGGAAGACCTCTTGACAC
TGCACACGGCCAAGGCGAAGGAGGGGGGAAGGGCGGGAGGGAGGGAGAGA
GGGATGCCACAGGTGGTCCGGGGAACGCCGTCGCGGTTGAGGTTGCACCC
GAAGCATTATCTCTTGGTCGAGCCGGTAGCCATGTTGATTAATCTGGACG
TGAAGCTGAAAGAGCACGCAGGTAAGGAGAAAGGGAAGGAGGACGTGCGT
GAGGGTCGGAGGGAAGGAGGGAGAGGGTTTCGGTGCATATGGACCGAACC
TGCCTGCCAATGTGATTGACCGGTCGTCTTACCCTCCCCTCCTTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCTTTCCCTCCTCTAGCGGCGATCACGCA
CTTCCGTCGTATGATCGAGACCATGGACAACGTCCTTCCTCCCCTCTTTC
CCGAGAAGGGGGACTACCTCCACGGGCTTGCCGCCTGTCTGTACGAATAC
CTGCGGCCCCGGCTGGGTATGTTACCACCAAGGAGTGCGATGATGATCAA
GGCCGAGATGAAAGTGCTCTTCGGGCGGGCGTGGGAAGTACGGAGGGTGG
GCTTAGGGGAGGGGCACCCGTTGACGATGGAGAGCAGGGAAATGGTGGAG
GCCATTGCATCGGCAGGGCAGGGGTGA back to topCoding sequence (CDS) from alignment at scaffold_2:1346682..1349208+ >mRNA_1147 ID=mRNA_1147|Name=jgi.p|Nanoce1779_2|668082|organism=Nannochloropsis oceanica|type=CDS|length=4350bp|location=Sequence derived from alignment at scaffold_2:1346682..1349208+ (Nannochloropsis oceanica) ATGACCCCACCCGCCGAGCAACCCCCGCCGCCCAATGATGAAGATGACCA AGCCGAGGTGGATGAGGGAGGGGACAACATCGAGGACGCCACTAGTCAAG AAAAGATAAAGAAGAAGAAAAGGAAGAAAAAGAAGAAGGCCACAAGCAGT ACCAATTGCAGCGTCTACATACCCCCGGCCTTTCAAAGCAATGTGCGTGT CATCATCTCGCCTGCCCTGGGTGTGGGTCGTTGCGCCGTTGCCGCTAGAG CCCTCGCACCCGGCGATCTCATTTTCGAGGAAGAACCTATCGCCTTGGTG AATTTCTCGCGGCATGCGCACGAGTACTGTGTGTATTGCGGCAAGTACGG GCCAAGAGGCAGTGGCGTTCTTGTCCCCGCCACAGACCTCGTTGTAGATG GTACTGTGATGTGTTGTGCTGCTCCAGCTTGTGCCGCGAGAAGAGGAGCC GCGCATCGGTTGGCGGGAAAAGAGGCCTGGGCACGCATTGCGGAGATTGC AAAGGATGAAAAGATAGATTCACATTTATTAACCATGGTGTTGCTGTTGA TCTGTCAAAGGCATTTAGCTCGCCATGGGGGAGGGGAAGAGCAGCAGCTG CAACAGAGGTGGATGGATGTGGATGCGCTGATGGATCATTGGGAAGAGCA GACGGCAGAGTGGAAGGAGTGTGTGGGGAAGGCGATGACGAGGTTGATTC AACATGTGCCGGAGGATGTCCGTGGAGGAGGAGGAGGAGGAGGAGGAGGA GGGGGATTGAGTGTGGAGGATGCTGCCAGGCTGACGTGTGTGGTGAATGT GAATAGTCACGGGGTAGGGACGACGAGAAGCTTCAATCAGATGCGGGGTC TGGGACTCTTTCCACTGCTGGCGTGCTTAAACCACTCGTGCCGACCGAAT TGTGCCTATGTCTTTGATACGGTGAAAGGGGGAAATATAGGGGTGAGGGC ATTAGAGGCCATTGAAGAGGGTGAAGAGCTCTTCGTGCATTATACCAACT TGTTGGTGTCGCGGAAGGTGAGAAAAGAGGAACTGCGGACGACCAAGTAC TTTGATTGTGGGTGTCGGCGGTGTGAGGGGGAGGGAGGGAGGGAAGGAGA GGCGGACCGCTTGATGGCGGCGTTGTGTTGTGCAGCGTGTGGGTTGGAGG GGAGGGTGCTGTCGCCGGGGGAGGAACCGGCAGCAGCAGCGAGTGAAGCA GCAGCCACGGCATTGTTGCGTTTGGCGGAAGAGGAGGAGGAAGTGGACGG GACGAAAGGAAAGAAGAAGAAAGGAAAAGGAAAAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGGAAAGATGGGGGAGAG AAGAACGAGGGAGGGACAAAGGGGAATTGGGGAACGACAGGTGTGAACGA TGGCATGGCAGGGCTAACGCTTGAGGAAGGGGAAGGGGGAGTGGAGGAAA GCAAGGGGGGAAAGACGAAAGAGAAAGACGGGCTGGGAAAAGAAGGGAGT GAAGAGAGCAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGC AGCAGCGTCATCCCATCGCTGCAGTCTGTGCTCCGCTGTCTTTAGCGTGC AGGAGATTTCCGAGTACCTGGAACGGGTGGAGGTTGGGACGGTGCAAGGA CAGCTGTTGCTTCGGTCCCAGACCGACGGCGCGGCGAAGCAGCATTTGGA AGACCTCTTGACACTGCACACGGCCAAGGCGAAGGAGGGGGGAAGGGCGG GAGGGAGGGAGAGAGGGATGCCACAGGTGGTCCGGGGAACGCCGTCGCGG TTGAGGTTGCACCCGAAGCATTATCTCTTGGTCGAGCCGGTAGCCATGTT GATTAATCTGGACGTGAAGCTGAAAGAGCACGCAGCGGCGATCACGCACT TCCGTCGTATGATCGAGACCATGGACAACGTCCTTCCTCCCCTCTTTCCC GAGAAGGGGGACTACCTCCACGGGCTTGCCGCCTGTCTGTACGAATACCT GCGGCCCCGGCTGGGTATGTTACCACCAAGGAGTGCGATGATGATCAAGG CCGAGATGAAAGTGCTCTTCGGGCGGGCGTGGGAAGTACGGAGGGTGGGC TTAGGGGAGGGGCACCCGTTGACGATGGAGAGCAGGGAAATGGTGGAGGC CATTGCATCGGCAGGGCAGGGGTGAATGACCCCACCCGCCGAGCAACCCC CGCCGCCCAATGATGAAGATGACCAAGCCGAGGTGGATGAGGGAGGGGAC AACATCGAGGACGCCACTAGTCAAGAAAAGATAAAGAAGAAGAAAAGGAA GAAAAAGAAGAAGGCCACAAGCAGTACCAATTGCAGCGTCTACATACCCC CGGCCTTTCAAAGCAATGTGCGTGTCATCATCTCGCCTGCCCTGGGTGTG GGTCGTTGCGCCGTTGCCGCTAGAGCCCTCGCACCCGGCGATCTCATTTT CGAGGAAGAACCTATCGCCTTGGTGAATTTCTCGCGGCATGCGCACGAGT ACTGTGTGTATTGCGGCAAGTACGGGCCAAGAGGCAGTGGCGTTCTTGTC CCCGCCACAGACCTCGTTGTAGATGGTACTGTGATGTGTTGTGCTGCTCC AGCTTGTGCCGCGAGAAGAGGAGCCGCGCATCGGTTGGCGGGAAAAGAGG CCTGGGCACGCATTGCGGAGATTGCAAAGGATGAAAAGATAGATTCACAT TTATTAACCATGGTGTTGCTGTTGATCTGTCAAAGGCATTTAGCTCGCCA TGGGGGAGGGGAAGAGCAGCAGCTGCAACAGAGGTGGATGGATGTGGATG CGCTGATGGATCATTGGGAAGAGCAGACGGCAGAGTGGAAGGAGTGTGTG GGGAAGGCGATGACGAGGTTGATTCAACATGTGCCGGAGGATGTCCGTGG AGGAGGAGGAGGAGGAGGAGGAGGAGGGGGATTGAGTGTGGAGGATGCTG CCAGGCTGACGTGTGTGGTGAATGTGAATAGTCACGGGGTAGGGACGACG AGAAGCTTCAATCAGATGCGGGGTCTGGGACTCTTTCCACTGCTGGCGTG CTTAAACCACTCGTGCCGACCGAATTGTGCCTATGTCTTTGATACGGTGA AAGGGGGAAATATAGGGGTGAGGGCATTAGAGGCCATTGAAGAGGGTGAA GAGCTCTTCGTGCATTATACCAACTTGTTGGTGTCGCGGAAGGTGAGAAA AGAGGAACTGCGGACGACCAAGTACTTTGATTGTGGGTGTCGGCGGTGTG AGGGGGAGGGAGGGAGGGAAGGAGAGGCGGACCGCTTGATGGCGGCGTTG TGTTGTGCAGCGTGTGGGTTGGAGGGGAGGGTGCTGTCGCCGGGGGAGGA ACCGGCAGCAGCAGCGAGTGAAGCAGCAGCCACGGCATTGTTGCGTTTGG CGGAAGAGGAGGAGGAAGTGGACGGGACGAAAGGAAAGAAGAAGAAAGGA AAAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG AGGAGAGGGGAAAGATGGGGGAGAGAAGAACGAGGGAGGGACAAAGGGGA ATTGGGGAACGACAGGTGTGAACGATGGCATGGCAGGGCTAACGCTTGAG GAAGGGGAAGGGGGAGTGGAGGAAAGCAAGGGGGGAAAGACGAAAGAGAA AGACGGGCTGGGAAAAGAAGGGAGTGAAGAGAGCAAGCCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCGGCGGCAGCAGCGTCATCCCATCGCTGCAGT CTGTGCTCCGCTGTCTTTAGCGTGCAGGAGATTTCCGAGTACCTGGAACG GGTGGAGGTTGGGACGGTGCAAGGACAGCTGTTGCTTCGGTCCCAGACCG ACGGCGCGGCGAAGCAGCATTTGGAAGACCTCTTGACACTGCACACGGCC AAGGCGAAGGAGGGGGGAAGGGCGGGAGGGAGGGAGAGAGGGATGCCACA GGTGGTCCGGGGAACGCCGTCGCGGTTGAGGTTGCACCCGAAGCATTATC TCTTGGTCGAGCCGGTAGCCATGTTGATTAATCTGGACGTGAAGCTGAAA GAGCACGCAGCGGCGATCACGCACTTCCGTCGTATGATCGAGACCATGGA CAACGTCCTTCCTCCCCTCTTTCCCGAGAAGGGGGACTACCTCCACGGGC TTGCCGCCTGTCTGTACGAATACCTGCGGCCCCGGCTGGGTATGTTACCA CCAAGGAGTGCGATGATGATCAAGGCCGAGATGAAAGTGCTCTTCGGGCG GGCGTGGGAAGTACGGAGGGTGGGCTTAGGGGAGGGGCACCCGTTGACGA TGGAGAGCAGGGAAATGGTGGAGGCCATTGCATCGGCAGGGCAGGGGTGA back to top
|