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Properties
| Property Name | Value |
|---|
| TranscriptId | 618526 |
| Track | FilteredModels2 |
| ProteinId | 618440 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_156 | supercontig | scaffold_156:22246..23522 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11397 ID=mRNA_11397|Name=jgi.p|Nanoce1779_2|618440|organism=Nannochloropsis oceanica|type=mRNA|length=921bp
ATGTATTGTGGGGACGAGGTCTTCCTCCGTGGTGGGGGCTATTTAGGCAC
GGCCACCAGCCGCTTTGGATATGCCGGGGAGGACTTGCCCAAAGCTGTCT
TTCCCTCGGCCGTAGGAACATGTGGTGGATGCGGTGGAGGGTGGGCAGGA
AGAAGGAAAAGGCAGGCGGACGCAGGGGCATCGAACAGTATGGACGTAGA
TGAGGCCGCCGCTGCCGGAAGGATCGGTAGCAATGCTGCAGCGAACGGGC
ACGTGCGGAATTGGGATGCAGTGGAGAGGATTTGGGCCCACGCGTTTGGA
CAAATAGCCGTACTGGACGAAGCCAAGGGTGTTCCTTTCAATAGTCAAAC
AGTGATGGAGCTGGCTTTTGAAAGGTTTGAAGTGGGTGCTTTGTATTTGG
CGCGGTCGGCCATGTTGAGTGCGTTCTCCACCGGTCGGGCGAGTGGGATT
TTCCAGGAACAACGCGTGCTGCGCGATGTGAAGGAGAGTTGTTGTTTGGT
CCCGCAGGCAGATAGTGACGATGGGGCTATGTTTGATGTGGAGGATAACG
ACCCGGAGGACGGAGTATACGAGCTCCCCGACGGCACCAAGGTCAAAATT
GACAAGGCCCCTCCGGCGGGGAATGACAGTGCTTTTTCCTCCTCTTCCAC
GTCGTCATCAATACCAGGACCGCAGGATCTACCGGGGTTGGTGTACGCAG
CGGTGGAGAAGGCGGATGTGGACGTGCGGAAAGAGTTGTTGGGAACCTGT
TTCCGTGGAGCAGCAGAACGATTGCAATTTGAACTGACAGAGAAAGTGCC
AGTGGCGTACAAGGTGAAGGTCGTGACGGCCACGCCGTTGGAGAGGCGGT
TTAGTGCGTGGATTGGAGGGTCCATTTTAGCGTCCTTAGGCTCGTTTCAG
CAGCTGTGGCTATCAAGCTAG back to topprotein sequence of jgi.p|Nanoce1779_2|618440 >mRNA_11397-protein ID=mRNA_11397-protein|Name=jgi.p|Nanoce1779_2|618440|organism=Nannochloropsis oceanica|type=polypeptide|length=307bp
MYCGDEVFLRGGGYLGTATSRFGYAGEDLPKAVFPSAVGTCGGCGGGWAG
RRKRQADAGASNSMDVDEAAAAGRIGSNAAANGHVRNWDAVERIWAHAFG
QIAVLDEAKGVPFNSQTVMELAFERFEVGALYLARSAMLSAFSTGRASGI
FQEQRVLRDVKESCCLVPQADSDDGAMFDVEDNDPEDGVYELPDGTKVKI
DKAPPAGNDSAFSSSSTSSSIPGPQDLPGLVYAAVEKADVDVRKELLGTC
FRGAAERLQFELTEKVPVAYKVKVVTATPLERRFSAWIGGSILASLGSFQ
QLWLSS* back to topmRNA from alignment at scaffold_156:22246..23522- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11397 ID=mRNA_11397|Name=jgi.p|Nanoce1779_2|618440|organism=Nannochloropsis oceanica|type=mRNA|length=1277bp|location=Sequence derived from alignment at scaffold_156:22246..23522- (Nannochloropsis oceanica)
ATGTATTGTGGGGACGAGGTCTTCCTCCGTGGTGGGGGCTATTTAGGCAC
GGCCACCAGCCGCTTTGGATATGCCGGGGAGGACTTGCCCAAAGCTGTCT
TTCCCTCGGCCGTAGGAACATGTGGTGGATGCGGTGGAGGGTGGGCAGGA
AGAAGGAAAAGGCAGGCGGACGCAGGGGCATCGAACAGTATGGACGTAGA
TGAGGCCGCCGCTGCCGGAAGGATCGGTAGCAATGCTGCAGCGGTACTTG
GAGACGCGAAAATTGGACTTCGACGAACGGATTTAGAACTAATCTTTTCC
CATGGAGAACGGGCACGTGCGGAATTGGGATGCAGTGGAGAGGATTTGGG
CCCACGCGTTTGGACAAATAGCCGTACTGGACGAAGCCAAGGGTGTTCCT
TTCAATGTACGCCTTGCCCACGTGGGCCACGCGCGCCGAGAGTCAAACAG
TGATGGAGCTGGCTTTTGAAAGGTTTGAAGTGGGTGCTTTGTATTTGGCG
CGGTCGGCCATGTTGAGTGCGTTCTCCACCGGTCGGGCGAGTGGGATTGT
GTGTGATTGCGGCGCTGGCTCGACGAGTGCATGTGCCGTTATTGGATGGA
TATGTGCCTAAAGCAGCTGGTGGGGAGAAGTGAGAGGGGCGGGGACTGGT
TGGATGAAAGGTTGGGGAGTGGTTGGCCTCGAAAAAAGTAACGGTGAGAC
CGTTTTGGGCAGCATCAGGGGTGGTGGCAGAAAAGATGCCTCCGCATTAA
CCGGCAGTTCCAGGAACAACGCGTGCTGCGCGATGTGAAGGAGAGTTGTT
GTTTGGTCCCGCAGGCAGATAGTGACGATGGGGCTATGTTTGATGTGGAG
GATAACGACCCGGAGGACGGAGTATACGAGCTCCCCGACGGCACCAAGGT
CAAAATTGACAAGGCCCCTCCGGCGGGTGCCGGAATCTGTCATGCTCCCA
GGGAATGACAGTGCTTTTTCCTCCTCTTCCACGTCGTCATCAATACCAGG
ACCGCAGGATCTACCGGGGTTGGTGTACGCAGCGGTGGAGAAGGCGGATG
TGGACGTGCGGAAAGAGTTGTTGGGAACGTGATTTTGACGGGAGCGGGTA
AGCTGTTTCCGTGGAGCAGCAGAACGATTGCAATTTGAACTGACAGAGAA
AGTGCCAGTGGCGTACAAGGTGAAGGTCGTGACGGCCACGCCGTTGGAGA
GGCGGTTTAGTGCGTGGATTGGAGGGTCCATTTTAGCGTCCTTAGGCTCG
TTTCAGCAGCTGTGGCTATCAAGCTAG back to topCoding sequence (CDS) from alignment at scaffold_156:22246..23522- >mRNA_11397 ID=mRNA_11397|Name=jgi.p|Nanoce1779_2|618440|organism=Nannochloropsis oceanica|type=CDS|length=5526bp|location=Sequence derived from alignment at scaffold_156:22246..23522- (Nannochloropsis oceanica)
CTGTTTCCGTGGAGCAGCAGAACGATTGCAATTTGAACTGACAGAGAAAG
TGCCAGTGGCGTACAAGGTGAAGGTCGTGACGGCCACGCCGTTGGAGAGG
CGGTTTAGTGCGTGGATTGGAGGGTCCATTTTAGCGTCCTTAGGCTCGTT
TCAGCAGCTGTGGCTATCAAGCTAGGGAATGACAGTGCTTTTTCCTCCTC
TTCCACGTCGTCATCAATACCAGGACCGCAGGATCTACCGGGGTTGGTGT
ACGCAGCGGTGGAGAAGGCGGATGTGGACGTGCGGAAAGAGTTGTTGGGA
ACTTCCAGGAACAACGCGTGCTGCGCGATGTGAAGGAGAGTTGTTGTTTG
GTCCCGCAGGCAGATAGTGACGATGGGGCTATGTTTGATGTGGAGGATAA
CGACCCGGAGGACGGAGTATACGAGCTCCCCGACGGCACCAAGGTCAAAA
TTGACAAGGCCCCTCCGGCGGAGTCAAACAGTGATGGAGCTGGCTTTTGA
AAGGTTTGAAGTGGGTGCTTTGTATTTGGCGCGGTCGGCCATGTTGAGTG
CGTTCTCCACCGGTCGGGCGAGTGGGATTAACGGGCACGTGCGGAATTGG
GATGCAGTGGAGAGGATTTGGGCCCACGCGTTTGGACAAATAGCCGTACT
GGACGAAGCCAAGGGTGTTCCTTTCAATATGTATTGTGGGGACGAGGTCT
TCCTCCGTGGTGGGGGCTATTTAGGCACGGCCACCAGCCGCTTTGGATAT
GCCGGGGAGGACTTGCCCAAAGCTGTCTTTCCCTCGGCCGTAGGAACATG
TGGTGGATGCGGTGGAGGGTGGGCAGGAAGAAGGAAAAGGCAGGCGGACG
CAGGGGCATCGAACAGTATGGACGTAGATGAGGCCGCCGCTGCCGGAAGG
ATCGGTAGCAATGCTGCAGCGCTGTTTCCGTGGAGCAGCAGAACGATTGC
AATTTGAACTGACAGAGAAAGTGCCAGTGGCGTACAAGGTGAAGGTCGTG
ACGGCCACGCCGTTGGAGAGGCGGTTTAGTGCGTGGATTGGAGGGTCCAT
TTTAGCGTCCTTAGGCTCGTTTCAGCAGCTGTGGCTATCAAGCTAGGGAA
TGACAGTGCTTTTTCCTCCTCTTCCACGTCGTCATCAATACCAGGACCGC
AGGATCTACCGGGGTTGGTGTACGCAGCGGTGGAGAAGGCGGATGTGGAC
GTGCGGAAAGAGTTGTTGGGAACTTCCAGGAACAACGCGTGCTGCGCGAT
GTGAAGGAGAGTTGTTGTTTGGTCCCGCAGGCAGATAGTGACGATGGGGC
TATGTTTGATGTGGAGGATAACGACCCGGAGGACGGAGTATACGAGCTCC
CCGACGGCACCAAGGTCAAAATTGACAAGGCCCCTCCGGCGGAGTCAAAC
AGTGATGGAGCTGGCTTTTGAAAGGTTTGAAGTGGGTGCTTTGTATTTGG
CGCGGTCGGCCATGTTGAGTGCGTTCTCCACCGGTCGGGCGAGTGGGATT
AACGGGCACGTGCGGAATTGGGATGCAGTGGAGAGGATTTGGGCCCACGC
GTTTGGACAAATAGCCGTACTGGACGAAGCCAAGGGTGTTCCTTTCAATA
TGTATTGTGGGGACGAGGTCTTCCTCCGTGGTGGGGGCTATTTAGGCACG
GCCACCAGCCGCTTTGGATATGCCGGGGAGGACTTGCCCAAAGCTGTCTT
TCCCTCGGCCGTAGGAACATGTGGTGGATGCGGTGGAGGGTGGGCAGGAA
GAAGGAAAAGGCAGGCGGACGCAGGGGCATCGAACAGTATGGACGTAGAT
GAGGCCGCCGCTGCCGGAAGGATCGGTAGCAATGCTGCAGCGCTGTTTCC
GTGGAGCAGCAGAACGATTGCAATTTGAACTGACAGAGAAAGTGCCAGTG
GCGTACAAGGTGAAGGTCGTGACGGCCACGCCGTTGGAGAGGCGGTTTAG
TGCGTGGATTGGAGGGTCCATTTTAGCGTCCTTAGGCTCGTTTCAGCAGC
TGTGGCTATCAAGCTAGGGAATGACAGTGCTTTTTCCTCCTCTTCCACGT
CGTCATCAATACCAGGACCGCAGGATCTACCGGGGTTGGTGTACGCAGCG
GTGGAGAAGGCGGATGTGGACGTGCGGAAAGAGTTGTTGGGAACTTCCAG
GAACAACGCGTGCTGCGCGATGTGAAGGAGAGTTGTTGTTTGGTCCCGCA
GGCAGATAGTGACGATGGGGCTATGTTTGATGTGGAGGATAACGACCCGG
AGGACGGAGTATACGAGCTCCCCGACGGCACCAAGGTCAAAATTGACAAG
GCCCCTCCGGCGGAGTCAAACAGTGATGGAGCTGGCTTTTGAAAGGTTTG
AAGTGGGTGCTTTGTATTTGGCGCGGTCGGCCATGTTGAGTGCGTTCTCC
ACCGGTCGGGCGAGTGGGATTAACGGGCACGTGCGGAATTGGGATGCAGT
GGAGAGGATTTGGGCCCACGCGTTTGGACAAATAGCCGTACTGGACGAAG
CCAAGGGTGTTCCTTTCAATATGTATTGTGGGGACGAGGTCTTCCTCCGT
GGTGGGGGCTATTTAGGCACGGCCACCAGCCGCTTTGGATATGCCGGGGA
GGACTTGCCCAAAGCTGTCTTTCCCTCGGCCGTAGGAACATGTGGTGGAT
GCGGTGGAGGGTGGGCAGGAAGAAGGAAAAGGCAGGCGGACGCAGGGGCA
TCGAACAGTATGGACGTAGATGAGGCCGCCGCTGCCGGAAGGATCGGTAG
CAATGCTGCAGCGCTGTTTCCGTGGAGCAGCAGAACGATTGCAATTTGAA
CTGACAGAGAAAGTGCCAGTGGCGTACAAGGTGAAGGTCGTGACGGCCAC
GCCGTTGGAGAGGCGGTTTAGTGCGTGGATTGGAGGGTCCATTTTAGCGT
CCTTAGGCTCGTTTCAGCAGCTGTGGCTATCAAGCTAGGGAATGACAGTG
CTTTTTCCTCCTCTTCCACGTCGTCATCAATACCAGGACCGCAGGATCTA
CCGGGGTTGGTGTACGCAGCGGTGGAGAAGGCGGATGTGGACGTGCGGAA
AGAGTTGTTGGGAACTTCCAGGAACAACGCGTGCTGCGCGATGTGAAGGA
GAGTTGTTGTTTGGTCCCGCAGGCAGATAGTGACGATGGGGCTATGTTTG
ATGTGGAGGATAACGACCCGGAGGACGGAGTATACGAGCTCCCCGACGGC
ACCAAGGTCAAAATTGACAAGGCCCCTCCGGCGGAGTCAAACAGTGATGG
AGCTGGCTTTTGAAAGGTTTGAAGTGGGTGCTTTGTATTTGGCGCGGTCG
GCCATGTTGAGTGCGTTCTCCACCGGTCGGGCGAGTGGGATTAACGGGCA
CGTGCGGAATTGGGATGCAGTGGAGAGGATTTGGGCCCACGCGTTTGGAC
AAATAGCCGTACTGGACGAAGCCAAGGGTGTTCCTTTCAATATGTATTGT
GGGGACGAGGTCTTCCTCCGTGGTGGGGGCTATTTAGGCACGGCCACCAG
CCGCTTTGGATATGCCGGGGAGGACTTGCCCAAAGCTGTCTTTCCCTCGG
CCGTAGGAACATGTGGTGGATGCGGTGGAGGGTGGGCAGGAAGAAGGAAA
AGGCAGGCGGACGCAGGGGCATCGAACAGTATGGACGTAGATGAGGCCGC
CGCTGCCGGAAGGATCGGTAGCAATGCTGCAGCGCTGTTTCCGTGGAGCA
GCAGAACGATTGCAATTTGAACTGACAGAGAAAGTGCCAGTGGCGTACAA
GGTGAAGGTCGTGACGGCCACGCCGTTGGAGAGGCGGTTTAGTGCGTGGA
TTGGAGGGTCCATTTTAGCGTCCTTAGGCTCGTTTCAGCAGCTGTGGCTA
TCAAGCTAGGGAATGACAGTGCTTTTTCCTCCTCTTCCACGTCGTCATCA
ATACCAGGACCGCAGGATCTACCGGGGTTGGTGTACGCAGCGGTGGAGAA
GGCGGATGTGGACGTGCGGAAAGAGTTGTTGGGAACTTCCAGGAACAACG
CGTGCTGCGCGATGTGAAGGAGAGTTGTTGTTTGGTCCCGCAGGCAGATA
GTGACGATGGGGCTATGTTTGATGTGGAGGATAACGACCCGGAGGACGGA
GTATACGAGCTCCCCGACGGCACCAAGGTCAAAATTGACAAGGCCCCTCC
GGCGGAGTCAAACAGTGATGGAGCTGGCTTTTGAAAGGTTTGAAGTGGGT
GCTTTGTATTTGGCGCGGTCGGCCATGTTGAGTGCGTTCTCCACCGGTCG
GGCGAGTGGGATTAACGGGCACGTGCGGAATTGGGATGCAGTGGAGAGGA
TTTGGGCCCACGCGTTTGGACAAATAGCCGTACTGGACGAAGCCAAGGGT
GTTCCTTTCAATATGTATTGTGGGGACGAGGTCTTCCTCCGTGGTGGGGG
CTATTTAGGCACGGCCACCAGCCGCTTTGGATATGCCGGGGAGGACTTGC
CCAAAGCTGTCTTTCCCTCGGCCGTAGGAACATGTGGTGGATGCGGTGGA
GGGTGGGCAGGAAGAAGGAAAAGGCAGGCGGACGCAGGGGCATCGAACAG
TATGGACGTAGATGAGGCCGCCGCTGCCGGAAGGATCGGTAGCAATGCTG
CAGCGCTGTTTCCGTGGAGCAGCAGAACGATTGCAATTTGAACTGACAGA
GAAAGTGCCAGTGGCGTACAAGGTGAAGGTCGTGACGGCCACGCCGTTGG
AGAGGCGGTTTAGTGCGTGGATTGGAGGGTCCATTTTAGCGTCCTTAGGC
TCGTTTCAGCAGCTGTGGCTATCAAGCTAGGGAATGACAGTGCTTTTTCC
TCCTCTTCCACGTCGTCATCAATACCAGGACCGCAGGATCTACCGGGGTT
GGTGTACGCAGCGGTGGAGAAGGCGGATGTGGACGTGCGGAAAGAGTTGT
TGGGAACTTCCAGGAACAACGCGTGCTGCGCGATGTGAAGGAGAGTTGTT
GTTTGGTCCCGCAGGCAGATAGTGACGATGGGGCTATGTTTGATGTGGAG
GATAACGACCCGGAGGACGGAGTATACGAGCTCCCCGACGGCACCAAGGT
CAAAATTGACAAGGCCCCTCCGGCGGAGTCAAACAGTGATGGAGCTGGCT
TTTGAAAGGTTTGAAGTGGGTGCTTTGTATTTGGCGCGGTCGGCCATGTT
GAGTGCGTTCTCCACCGGTCGGGCGAGTGGGATTAACGGGCACGTGCGGA
ATTGGGATGCAGTGGAGAGGATTTGGGCCCACGCGTTTGGACAAATAGCC
GTACTGGACGAAGCCAAGGGTGTTCCTTTCAATATGTATTGTGGGGACGA
GGTCTTCCTCCGTGGTGGGGGCTATTTAGGCACGGCCACCAGCCGCTTTG
GATATGCCGGGGAGGACTTGCCCAAAGCTGTCTTTCCCTCGGCCGTAGGA
ACATGTGGTGGATGCGGTGGAGGGTGGGCAGGAAGAAGGAAAAGGCAGGC
GGACGCAGGGGCATCGAACAGTATGGACGTAGATGAGGCCGCCGCTGCCG
GAAGGATCGGTAGCAATGCTGCAGCG back to top
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