Properties
Property Name | Value |
TranscriptId | 575533 |
Track | FilteredModels2 |
ProteinId | 575447 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_2 | supercontig | scaffold_2:1307229..1308719 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1132 ID=mRNA_1132|Name=jgi.p|Nanoce1779_2|575447|organism=Nannochloropsis oceanica|type=mRNA|length=1087bp GAGAGTAGCAATGGGAGGGCCAGCGGGCGAAGTAGGAGGGGAGGGTTGAA ATGGAGCATTGCGCACAGGGTGGTCTTCGCCTTTGTCTGGTCGAGGCGGC TGGCCTTGTGTAAGGATTTGTCGGCCTCAATTGTTCTTCGAACGGCTGAA CGTCAGCGACTGCTGCCACGCTGACGAGGAAGTCCAACGCGATGATCGAC GTTCGGTCGGTTGCCATCGTCGTTCCTTGGCTCAAGCACCTTGAAATAAC ACCTCGTCCTCATCCTCCACCCTTCCACGCTTCTCTCAGGGAGTCTTCTT GCCTCGTAACCCTCATTTCTAGCAGCATAATGAAGTTCTTTGTCCTGCTG GCTCTGTTCCTGGCCACCTCCTCTACTGTGCTTGCATTCACCACTACTAG GCGTAAGTTCTGAAGAACGGGAGGATCTGCAGTGCCTGTAATGACTTCGA TCCAATGTGGTCATATAGATAGCTATGGGAGGGTTCATAAGGGATAGAGG GGCTGCGCCCATGACTGACGGGAAAAGGAGATGGGAGACAAAATTCTCTT ATCACACCGTCTGGAACCCCTCGTCCGACACAGGTTTCATCGTCCCGTGC ACCAATCCGATGATTTCACCGTCGATCCGCAGTGTCCGGACCGCCCGAAA TGCTCGTGGTGGTATGCTGGCCATGAAAGTCCAACCCCCGAGCCGCAAAA ACGAGGAGAACGAACGCCTGCGAACCCTGGAGCAGGACTCAGAGAGGTGG TTCCAAGAACAGCAACGACGGGAGGCGAACGGCGAGTTGGGATGGCTCGA GAACCCAGCGTTTTATACCGCAGTTTTCTTCCTCTGCCCCCTCGTCATTC TGGTGGGGGGCGCCGCAACGGGTGTCATCCCAGGCTTTGTCCCCAACACT TACGAATACTCTACCATGGAGGAGGTGAAGAGCAGTTTCTCCTATGGAGA TTTGACGCAGGCCGCCGAATATGCATCTGGTGCGAGTTCGTTGTTTTAAC GAGGGAGGGAAGGAGGGAGGGAGGGACGGTGGGGCTGTCCTTCTTTTGCA TTGAGGACATGAAGAGACGTTTGCCCATAAGATGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|575447 >mRNA_1132-protein ID=mRNA_1132-protein|Name=jgi.p|Nanoce1779_2|575447|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp MGGFIRDRGAAPMTDGKRRWETKFSYHTVWNPSSDTGFIVPCTNPMISPS IRSVRTARNARGGMLAMKVQPPSRKNEENERLRTLEQDSERWFQEQQRRE ANGELGWLENPAFYTAVFFLCPLVILVGGAATGVIPGFVPNTYEYSTMEE VKSSFSYGDLTQAAEYASGASSLF* back to topmRNA from alignment at scaffold_2:1307229..1308719+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1132 ID=mRNA_1132|Name=jgi.p|Nanoce1779_2|575447|organism=Nannochloropsis oceanica|type=mRNA|length=1491bp|location=Sequence derived from alignment at scaffold_2:1307229..1308719+ (Nannochloropsis oceanica) GAGAGTAGCAATGGGAGGGCCAGCGGGCGAAGTAGGAGGGGAGGGTTGAA
ATGGAGCATTGCGCACAGGGTGGTCTTCGCCTTTGTCTGGTCGAGGCGGC
TGGCCTTGTGTAAGGATTTGTCGGCCTCAATTGTTCTTCGAACGGCTGAA
CGTCAGCGACTGCTGCCACGCTGACGAGGAAGTCCAACGCGATGATCGAC
GTTCGGTCGGTTGCCATCGTCGTTCCTTGGCTCAAGCACCTTGAAATAAC
ACCTCGTCCTCATCCTCCACCCTTCCACGCTTCTCTCAGGGAGTCTTCTT
GCCTCGTAACCCTCATTTCTAGCAGCATAATGAAGTTCTTTGTCCTGCTG
GCTCTGTTCCTGGCCACCTCCTCTACTGTGCTTGCATTCACCACTACTAG
GCGTAAGTTCTGAAGAACGGGAGGATCTGCAGTGCCTGTAATGACTTCGA
TCCAATGTGGTCATATAGATAGCTATGGGAGGGTTCATAAGGGATAGAGG
GGCTGCGCCCATGACTGACGGGAAAAGGAGATGGGAGACAAAATTCTCTT
ATCACACCGTCTGGAACCCCTCGTCCGACACAGGTTTCATCGTCCCGTGC
ACCAATCCGATGATTTCACCGTCGATCCGCAGTGTCCGGACCGCCCGAAA
TGCTCGTGGTGGTATGCTGGCCATGAAAGTCCAACCCCCGAGCCGCAAAA
ACGAGGAGAACGAACGCCTGCGAACCCTGGAGCAGGACTCAGAGAGGTGG
TTCCAAGAACAGCAACGACGGGAGGCGAACGGCGAGTTGGGTAAGTAAAA
TCAAGTAGAAGGAGTAAAGAGCATGCCGTAGAAATCATGATGGGGCTGGG
AGAGCAAGAGAAGTGATCTGTATGTCTCTGGCGGACCTCTTCCTCCCTCT
CTCCTTCCTTCCCTCCATTCTCCTTTCCTCCTCTCTATTTGTGTTTCCCG
CTGATGACAATTAACTGAAATCCAACACTTAGACCTTTTTCATTGAAGGT
GCTGCTGAATTTCAATGAATTCGAGCTTTTTAACCCTGAGGAAAACACAC
CGAACCCCACCACTCCCTCCCTCTCCCTCCCTACCTTGCATACCCTCACG
GACGAGTCCAAAGCACTTCAACGCCTCACACACATGCCTCCTCCGAATTT
CATTTTTCTGTCTTTTCCCTTTATTCTTAACCCTCTACCAACAGGATGGC
TCGAGAACCCAGCGTTTTATACCGCAGTTTTCTTCCTCTGCCCCCTCGTC
ATTCTGGTGGGGGGCGCCGCAACGGGTGTCATCCCAGGCTTTGTCCCCAA
CACTTACGAATACTCTACCATGGAGGAGGTGAAGAGCAGTTTCTCCTATG
GAGATTTGACGCAGGCCGCCGAATATGCATCTGGTGCGAGTTCGTTGTTT
TAACGAGGGAGGGAAGGAGGGAGGGAGGGACGGTGGGGCTGTCCTTCTTT
TGCATTGAGGACATGAAGAGACGTTTGCCCATAAGATGTAG back to topCoding sequence (CDS) from alignment at scaffold_2:1307229..1308719+ >mRNA_1132 ID=mRNA_1132|Name=jgi.p|Nanoce1779_2|575447|organism=Nannochloropsis oceanica|type=CDS|length=1050bp|location=Sequence derived from alignment at scaffold_2:1307229..1308719+ (Nannochloropsis oceanica) ATGGGAGGGTTCATAAGGGATAGAGGGGCTGCGCCCATGACTGACGGGAA AAGGAGATGGGAGACAAAATTCTCTTATCACACCGTCTGGAACCCCTCGT CCGACACAGGTTTCATCGTCCCGTGCACCAATCCGATGATTTCACCGTCG ATCCGCAGTGTCCGGACCGCCCGAAATGCTCGTGGTGGTATGCTGGCCAT GAAAGTCCAACCCCCGAGCCGCAAAAACGAGGAGAACGAACGCCTGCGAA CCCTGGAGCAGGACTCAGAGAGGTGGTTCCAAGAACAGCAACGACGGGAG GCGAACGGCGAGTTGGGATGGCTCGAGAACCCAGCGTTTTATACCGCAGT TTTCTTCCTCTGCCCCCTCGTCATTCTGGTGGGGGGCGCCGCAACGGGTG TCATCCCAGGCTTTGTCCCCAACACTTACGAATACTCTACCATGGAGGAG GTGAAGAGCAGTTTCTCCTATGGAGATTTGACGCAGGCCGCCGAATATGC ATCTGGTGCGAGTTCGTTGTTTTAAATGGGAGGGTTCATAAGGGATAGAG GGGCTGCGCCCATGACTGACGGGAAAAGGAGATGGGAGACAAAATTCTCT TATCACACCGTCTGGAACCCCTCGTCCGACACAGGTTTCATCGTCCCGTG CACCAATCCGATGATTTCACCGTCGATCCGCAGTGTCCGGACCGCCCGAA ATGCTCGTGGTGGTATGCTGGCCATGAAAGTCCAACCCCCGAGCCGCAAA AACGAGGAGAACGAACGCCTGCGAACCCTGGAGCAGGACTCAGAGAGGTG GTTCCAAGAACAGCAACGACGGGAGGCGAACGGCGAGTTGGGATGGCTCG AGAACCCAGCGTTTTATACCGCAGTTTTCTTCCTCTGCCCCCTCGTCATT CTGGTGGGGGGCGCCGCAACGGGTGTCATCCCAGGCTTTGTCCCCAACAC TTACGAATACTCTACCATGGAGGAGGTGAAGAGCAGTTTCTCCTATGGAG ATTTGACGCAGGCCGCCGAATATGCATCTGGTGCGAGTTCGTTGTTTTAA back to top
|