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Properties
| Property Name | Value |
| TranscriptId | 668144 |
| Track | FilteredModels2 |
| ProteinId | 668058 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:1286265..1289304 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1123 ID=mRNA_1123|Name=jgi.p|Nanoce1779_2|668058|organism=Nannochloropsis oceanica|type=mRNA|length=3040bp CATCTGCCGACCTACCCACAGCACAGCCCCCATTCATGTACTTTAAACGT GCACTATATACTGCCGCTTTTATCGTGGCTTCCCATCGCCCTCGAACGCA GGGCTCCGACAGTACGTACCCCCAGCAATTATCACTGACCTCCCCTCCAC CCTCCTCCCTCCTCCGATTCATAAAATTAGTAGCATGGTCGTCAACACCA TCGCGTCTGCAGGTCCGGAGAACCGGAAGCTACCTAAGAAGGAGCAAGAT CTGTTTCGGTCCATCGTCAAGTTCTATGAGACGAAACAGTACAAAAAGGG CCTGAAAGCCGCGGACGCCATCCTAAAGAAATACCCCACCCATGGCGAGA CCCAAGCGATGAAAGGGCTTATTTATAACTGTATGGAGAAAAAGGAAGAG GCTTACGAGCTCGTGAAGCAAGGATTGCGGAATGATGTGCGGAGCCATGT GTGTTGGCATGTCTTTGGGCTGCTGCATCGCTCAGACAGAAATCATAAGG AGGCCACCAAGTGTTACCTCAATGCTTTGCGCATCGAGAAACATCACATG CAAATCCTCAAGGACCTTGGCAACCTCCAAATACAAATGAGGGATTTAGA AGGTTTTGTAGAGACGAAGCGGACGATCCTGATCGAGAACAAGAAGTTGA AGGTGAACTGGATTGGCTTCGCCGTGGCGAACCATCTGTACGGCGACCTC GATCAGGCCCTTAAAGTCATTGATGCCTTCCTCAGCACCCTCGACAACCG TGAGAGGGGGTACGAGGAGGGAGAGCTGGTATTGTACAAGACGTTGATTT TGGAGCAGGCAGGACGGATAGAGGAGGCGCTAACGTGGTTGGAGGCCGAG ATGAATTATGTGGTGGACGGTCTATCCGCGCGCATGAAACGTGCAGAGCT CTTACTGGCCTTGGGGCGCTTCGAAGACGCCCATGCTGCCTACCGGGCGT TGCTTGCGGAAAATAGCGAGCATTATCAGTATCATTCTGGATTGCAATGT TCGGTATTGCGCCTGGATGCGGCCACGAGTGCAGACATGTTGCAGCTATC GGGGTGTGCCCTACCGTCCACCGAGCTCCCCTCCCTCTCCCTCCAACAAC GCGCCCTCCTTCAAGCAGAGTACGAAGAGATAATCAAAATTGAACCTTCC TCCCACGTCTGCGACAAGATCCCTCTCACCTTCCTGGAGGGTGATGCATT TAAAACCCGCGTGGACACCTACATGCGTAAGCACCTGCAACGCGGCCTCC CCTCCCTCGGCTCCGACCTCGCCGCCCTCTACCTCACTCTCGACCCAGAG ACCGGCAAGAGCGTAAGGGCAAAGGACCCTTATGACATCAATCAAAATGG GCGTTTCTTGGTCGTTAAAGAGCTAGTAGAGCGATACAGAGACTCCCTGA CCAAGACCGGAGCCCTCCCTCCCCCTCCCTCCTTCTCTTCCTCCTCCTCC ACTTCAACACAAAATGGCACCTCCTCCTCCTCCTCCTCCTCCTCCTTCTT TTATTCTCCTTCTTCTTCTTTTGATGCCAAAACGACCCTTCTATGGACCA ATTTTCTCTATGTCCAACTGTTGGAAGCTTCCGGCGCTCTCCCTCAAGCC CTCGCACTCCTTCTCGACCACTGCCTGCCTGCATGCGCCGACGACGATAA CGGCACCTCGTTAGACATGTATCTGCGTCAGGCCCGCCTACTGAAAAAGA GTGGAATCATTGCAGACGCGGCCACGGTGATGGATAAGGCAAGGCTACTG GATCTTTCCGACCGGTACGTGAACAACAAGTGCACGAAGTACTTGTTAAG GGCGGGGAGGGTGGAAGATGCCCAAGCGGTGGTAGCGCTGTTTGCCAAGC ACGAAGGCGACGCGCAGGCCTACTTGTGCGAAATGCAGTGCATGTGGTAT GAGTTGGAATGGGCCAAGGCCGTGTTTGCCCAGGCATTGATGAACGGAGG GAAGGAAGGGTTGGGCAAGGCGTTGAAAAAGTTCGCCGCGGTGGAAAAAC ATTTCGCGGATTTTGTTGAGGATCAATTCGACTTTCACAACTATTGCATA CGGAAGATGACGCTGAGGGCGTACGTGGACGTGTTAAGGTTAGAGGATGG GTTGCTCGCGCATGAGGACTATCTCGAGGCGGCCCGGGGGACGGTGGAGT GTTATTTGGCCCTGCTGGCGAGGCCTAAGGAGGAGGAAGGGGGGGAAGTA AAAGACCTTTATGCAGGCATGACGGCGGCAGAACGCAAGAAAGAAAAGGC CAAGGCACGCAAGGCGGTGAAGAAGCAGGAGGAGGAAGCAGCAGCTGCAG CAGCAAGAGTAGCAGGAACAGCAGCAGCAGCGGAGGAGGAGGCCAAAAAC AAGGCAAACAAGAAGACGGCTGAGGGGGTAAGAATCCCCGTTGAAGATGA CCCCGACGGCGTCAAACTCGCCGAGAAGGATCCGTTGGAGGAAGCCAAGC GAGTGCTGGTCTCCATGACGCAGCACGCGGGCAAGGTCGTTGAGACACAC ACTCTGGCGTATGATGTGGCCACGAAACGAGGTAAACCCCTGCTGGCGCT GCAGGCGCTGATCCGTGCGCACGCCCTGCGTCCCTCCCATCCTGAAGTGT TTTGTCGGACAGTCGATTTTATGGCCAGCTTGATGGATGGAGGGCAGGAT GCCGGGTGGGCGAGAGGGATGCACCCGACGGTGGCTGCGGTGATAGAAGC CGAGAAGGAGGGGTTGTTGGAGGGGGGGGCAGACCTGGGAGGGTTTGTGG AGGCATACGTTAAGAAGGCCACGGCGTGGGCGTCGTTACCACATATGTTG GCTGCCGCTCGGGGGATGGCGCGCGCACAGGTCCGGCCAGGCGCAACGGA AAAGGCGGTGGGATTGGTGATAGACGGAGTGAAGGAAGGGAAGTGCAGGG GAATGACCGTGGGGGGTTTGAAGGAGGCGCTCAGGATAGCGGAGACGGAG CTGCGGGCTGGACCGGCGGCGTTGGCGGAGATGAGGGAGGTATGCATGGA ACGATTTCCCTCGGCGACCTGCTTTGCGGTGTCGTCATGA back to topprotein sequence of jgi.p|Nanoce1779_2|668058 >mRNA_1123-protein ID=mRNA_1123-protein|Name=jgi.p|Nanoce1779_2|668058|organism=Nannochloropsis oceanica|type=polypeptide|length=952bp MVVNTIASAGPENRKLPKKEQDLFRSIVKFYETKQYKKGLKAADAILKKY PTHGETQAMKGLIYNCMEKKEEAYELVKQGLRNDVRSHVCWHVFGLLHRS DRNHKEATKCYLNALRIEKHHMQILKDLGNLQIQMRDLEGFVETKRTILI ENKKLKVNWIGFAVANHLYGDLDQALKVIDAFLSTLDNRERGYEEGELVL YKTLILEQAGRIEEALTWLEAEMNYVVDGLSARMKRAELLLALGRFEDAH AAYRALLAENSEHYQYHSGLQCSVLRLDAATSADMLQLSGCALPSTELPS LSLQQRALLQAEYEEIIKIEPSSHVCDKIPLTFLEGDAFKTRVDTYMRKH LQRGLPSLGSDLAALYLTLDPETGKSVRAKDPYDINQNGRFLVVKELVER YRDSLTKTGALPPPPSFSSSSSTSTQNGTSSSSSSSSFFYSPSSSFDAKT TLLWTNFLYVQLLEASGALPQALALLLDHCLPACADDDNGTSLDMYLRQA RLLKKSGIIADAATVMDKARLLDLSDRYVNNKCTKYLLRAGRVEDAQAVV ALFAKHEGDAQAYLCEMQCMWYELEWAKAVFAQALMNGGKEGLGKALKKF AAVEKHFADFVEDQFDFHNYCIRKMTLRAYVDVLRLEDGLLAHEDYLEAA RGTVECYLALLARPKEEEGGEVKDLYAGMTAAERKKEKAKARKAVKKQEE EAAAAAARVAGTAAAAEEEAKNKANKKTAEGVRIPVEDDPDGVKLAEKDP LEEAKRVLVSMTQHAGKVVETHTLAYDVATKRGKPLLALQALIRAHALRP SHPEVFCRTVDFMASLMDGGQDAGWARGMHPTVAAVIEAEKEGLLEGGAD LGGFVEAYVKKATAWASLPHMLAAARGMARAQVRPGATEKAVGLVIDGVK EGKCRGMTVGGLKEALRIAETELRAGPAALAEMREVCMERFPSATCFAVS S* back to topmRNA from alignment at scaffold_2:1286265..1289304+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1123 ID=mRNA_1123|Name=jgi.p|Nanoce1779_2|668058|organism=Nannochloropsis oceanica|type=mRNA|length=3040bp|location=Sequence derived from alignment at scaffold_2:1286265..1289304+ (Nannochloropsis oceanica) CATCTGCCGACCTACCCACAGCACAGCCCCCATTCATGTACTTTAAACGT
GCACTATATACTGCCGCTTTTATCGTGGCTTCCCATCGCCCTCGAACGCA
GGGCTCCGACAGTACGTACCCCCAGCAATTATCACTGACCTCCCCTCCAC
CCTCCTCCCTCCTCCGATTCATAAAATTAGTAGCATGGTCGTCAACACCA
TCGCGTCTGCAGGTCCGGAGAACCGGAAGCTACCTAAGAAGGAGCAAGAT
CTGTTTCGGTCCATCGTCAAGTTCTATGAGACGAAACAGTACAAAAAGGG
CCTGAAAGCCGCGGACGCCATCCTAAAGAAATACCCCACCCATGGCGAGA
CCCAAGCGATGAAAGGGCTTATTTATAACTGTATGGAGAAAAAGGAAGAG
GCTTACGAGCTCGTGAAGCAAGGATTGCGGAATGATGTGCGGAGCCATGT
GTGTTGGCATGTCTTTGGGCTGCTGCATCGCTCAGACAGAAATCATAAGG
AGGCCACCAAGTGTTACCTCAATGCTTTGCGCATCGAGAAACATCACATG
CAAATCCTCAAGGACCTTGGCAACCTCCAAATACAAATGAGGGATTTAGA
AGGTTTTGTAGAGACGAAGCGGACGATCCTGATCGAGAACAAGAAGTTGA
AGGTGAACTGGATTGGCTTCGCCGTGGCGAACCATCTGTACGGCGACCTC
GATCAGGCCCTTAAAGTCATTGATGCCTTCCTCAGCACCCTCGACAACCG
TGAGAGGGGGTACGAGGAGGGAGAGCTGGTATTGTACAAGACGTTGATTT
TGGAGCAGGCAGGACGGATAGAGGAGGCGCTAACGTGGTTGGAGGCCGAG
ATGAATTATGTGGTGGACGGTCTATCCGCGCGCATGAAACGTGCAGAGCT
CTTACTGGCCTTGGGGCGCTTCGAAGACGCCCATGCTGCCTACCGGGCGT
TGCTTGCGGAAAATAGCGAGCATTATCAGTATCATTCTGGATTGCAATGT
TCGGTATTGCGCCTGGATGCGGCCACGAGTGCAGACATGTTGCAGCTATC
GGGGTGTGCCCTACCGTCCACCGAGCTCCCCTCCCTCTCCCTCCAACAAC
GCGCCCTCCTTCAAGCAGAGTACGAAGAGATAATCAAAATTGAACCTTCC
TCCCACGTCTGCGACAAGATCCCTCTCACCTTCCTGGAGGGTGATGCATT
TAAAACCCGCGTGGACACCTACATGCGTAAGCACCTGCAACGCGGCCTCC
CCTCCCTCGGCTCCGACCTCGCCGCCCTCTACCTCACTCTCGACCCAGAG
ACCGGCAAGAGCGTAAGGGCAAAGGACCCTTATGACATCAATCAAAATGG
GCGTTTCTTGGTCGTTAAAGAGCTAGTAGAGCGATACAGAGACTCCCTGA
CCAAGACCGGAGCCCTCCCTCCCCCTCCCTCCTTCTCTTCCTCCTCCTCC
ACTTCAACACAAAATGGCACCTCCTCCTCCTCCTCCTCCTCCTCCTTCTT
TTATTCTCCTTCTTCTTCTTTTGATGCCAAAACGACCCTTCTATGGACCA
ATTTTCTCTATGTCCAACTGTTGGAAGCTTCCGGCGCTCTCCCTCAAGCC
CTCGCACTCCTTCTCGACCACTGCCTGCCTGCATGCGCCGACGACGATAA
CGGCACCTCGTTAGACATGTATCTGCGTCAGGCCCGCCTACTGAAAAAGA
GTGGAATCATTGCAGACGCGGCCACGGTGATGGATAAGGCAAGGCTACTG
GATCTTTCCGACCGGTACGTGAACAACAAGTGCACGAAGTACTTGTTAAG
GGCGGGGAGGGTGGAAGATGCCCAAGCGGTGGTAGCGCTGTTTGCCAAGC
ACGAAGGCGACGCGCAGGCCTACTTGTGCGAAATGCAGTGCATGTGGTAT
GAGTTGGAATGGGCCAAGGCCGTGTTTGCCCAGGCATTGATGAACGGAGG
GAAGGAAGGGTTGGGCAAGGCGTTGAAAAAGTTCGCCGCGGTGGAAAAAC
ATTTCGCGGATTTTGTTGAGGATCAATTCGACTTTCACAACTATTGCATA
CGGAAGATGACGCTGAGGGCGTACGTGGACGTGTTAAGGTTAGAGGATGG
GTTGCTCGCGCATGAGGACTATCTCGAGGCGGCCCGGGGGACGGTGGAGT
GTTATTTGGCCCTGCTGGCGAGGCCTAAGGAGGAGGAAGGGGGGGAAGTA
AAAGACCTTTATGCAGGCATGACGGCGGCAGAACGCAAGAAAGAAAAGGC
CAAGGCACGCAAGGCGGTGAAGAAGCAGGAGGAGGAAGCAGCAGCTGCAG
CAGCAAGAGTAGCAGGAACAGCAGCAGCAGCGGAGGAGGAGGCCAAAAAC
AAGGCAAACAAGAAGACGGCTGAGGGGGTAAGAATCCCCGTTGAAGATGA
CCCCGACGGCGTCAAACTCGCCGAGAAGGATCCGTTGGAGGAAGCCAAGC
GAGTGCTGGTCTCCATGACGCAGCACGCGGGCAAGGTCGTTGAGACACAC
ACTCTGGCGTATGATGTGGCCACGAAACGAGGTAAACCCCTGCTGGCGCT
GCAGGCGCTGATCCGTGCGCACGCCCTGCGTCCCTCCCATCCTGAAGTGT
TTTGTCGGACAGTCGATTTTATGGCCAGCTTGATGGATGGAGGGCAGGAT
GCCGGGTGGGCGAGAGGGATGCACCCGACGGTGGCTGCGGTGATAGAAGC
CGAGAAGGAGGGGTTGTTGGAGGGGGGGGCAGACCTGGGAGGGTTTGTGG
AGGCATACGTTAAGAAGGCCACGGCGTGGGCGTCGTTACCACATATGTTG
GCTGCCGCTCGGGGGATGGCGCGCGCACAGGTCCGGCCAGGCGCAACGGA
AAAGGCGGTGGGATTGGTGATAGACGGAGTGAAGGAAGGGAAGTGCAGGG
GAATGACCGTGGGGGGTTTGAAGGAGGCGCTCAGGATAGCGGAGACGGAG
CTGCGGGCTGGACCGGCGGCGTTGGCGGAGATGAGGGAGGTATGCATGGA
ACGATTTCCCTCGGCGACCTGCTTTGCGGTGTCGTCATGA back to topCoding sequence (CDS) from alignment at scaffold_2:1286265..1289304+ >mRNA_1123 ID=mRNA_1123|Name=jgi.p|Nanoce1779_2|668058|organism=Nannochloropsis oceanica|type=CDS|length=2856bp|location=Sequence derived from alignment at scaffold_2:1286265..1289304+ (Nannochloropsis oceanica) ATGGTCGTCAACACCATCGCGTCTGCAGGTCCGGAGAACCGGAAGCTACC TAAGAAGGAGCAAGATCTGTTTCGGTCCATCGTCAAGTTCTATGAGACGA AACAGTACAAAAAGGGCCTGAAAGCCGCGGACGCCATCCTAAAGAAATAC CCCACCCATGGCGAGACCCAAGCGATGAAAGGGCTTATTTATAACTGTAT GGAGAAAAAGGAAGAGGCTTACGAGCTCGTGAAGCAAGGATTGCGGAATG ATGTGCGGAGCCATGTGTGTTGGCATGTCTTTGGGCTGCTGCATCGCTCA GACAGAAATCATAAGGAGGCCACCAAGTGTTACCTCAATGCTTTGCGCAT CGAGAAACATCACATGCAAATCCTCAAGGACCTTGGCAACCTCCAAATAC AAATGAGGGATTTAGAAGGTTTTGTAGAGACGAAGCGGACGATCCTGATC GAGAACAAGAAGTTGAAGGTGAACTGGATTGGCTTCGCCGTGGCGAACCA TCTGTACGGCGACCTCGATCAGGCCCTTAAAGTCATTGATGCCTTCCTCA GCACCCTCGACAACCGTGAGAGGGGGTACGAGGAGGGAGAGCTGGTATTG TACAAGACGTTGATTTTGGAGCAGGCAGGACGGATAGAGGAGGCGCTAAC GTGGTTGGAGGCCGAGATGAATTATGTGGTGGACGGTCTATCCGCGCGCA TGAAACGTGCAGAGCTCTTACTGGCCTTGGGGCGCTTCGAAGACGCCCAT GCTGCCTACCGGGCGTTGCTTGCGGAAAATAGCGAGCATTATCAGTATCA TTCTGGATTGCAATGTTCGGTATTGCGCCTGGATGCGGCCACGAGTGCAG ACATGTTGCAGCTATCGGGGTGTGCCCTACCGTCCACCGAGCTCCCCTCC CTCTCCCTCCAACAACGCGCCCTCCTTCAAGCAGAGTACGAAGAGATAAT CAAAATTGAACCTTCCTCCCACGTCTGCGACAAGATCCCTCTCACCTTCC TGGAGGGTGATGCATTTAAAACCCGCGTGGACACCTACATGCGTAAGCAC CTGCAACGCGGCCTCCCCTCCCTCGGCTCCGACCTCGCCGCCCTCTACCT CACTCTCGACCCAGAGACCGGCAAGAGCGTAAGGGCAAAGGACCCTTATG ACATCAATCAAAATGGGCGTTTCTTGGTCGTTAAAGAGCTAGTAGAGCGA TACAGAGACTCCCTGACCAAGACCGGAGCCCTCCCTCCCCCTCCCTCCTT CTCTTCCTCCTCCTCCACTTCAACACAAAATGGCACCTCCTCCTCCTCCT CCTCCTCCTCCTTCTTTTATTCTCCTTCTTCTTCTTTTGATGCCAAAACG ACCCTTCTATGGACCAATTTTCTCTATGTCCAACTGTTGGAAGCTTCCGG CGCTCTCCCTCAAGCCCTCGCACTCCTTCTCGACCACTGCCTGCCTGCAT GCGCCGACGACGATAACGGCACCTCGTTAGACATGTATCTGCGTCAGGCC CGCCTACTGAAAAAGAGTGGAATCATTGCAGACGCGGCCACGGTGATGGA TAAGGCAAGGCTACTGGATCTTTCCGACCGGTACGTGAACAACAAGTGCA CGAAGTACTTGTTAAGGGCGGGGAGGGTGGAAGATGCCCAAGCGGTGGTA GCGCTGTTTGCCAAGCACGAAGGCGACGCGCAGGCCTACTTGTGCGAAAT GCAGTGCATGTGGTATGAGTTGGAATGGGCCAAGGCCGTGTTTGCCCAGG CATTGATGAACGGAGGGAAGGAAGGGTTGGGCAAGGCGTTGAAAAAGTTC GCCGCGGTGGAAAAACATTTCGCGGATTTTGTTGAGGATCAATTCGACTT TCACAACTATTGCATACGGAAGATGACGCTGAGGGCGTACGTGGACGTGT TAAGGTTAGAGGATGGGTTGCTCGCGCATGAGGACTATCTCGAGGCGGCC CGGGGGACGGTGGAGTGTTATTTGGCCCTGCTGGCGAGGCCTAAGGAGGA GGAAGGGGGGGAAGTAAAAGACCTTTATGCAGGCATGACGGCGGCAGAAC GCAAGAAAGAAAAGGCCAAGGCACGCAAGGCGGTGAAGAAGCAGGAGGAG GAAGCAGCAGCTGCAGCAGCAAGAGTAGCAGGAACAGCAGCAGCAGCGGA GGAGGAGGCCAAAAACAAGGCAAACAAGAAGACGGCTGAGGGGGTAAGAA TCCCCGTTGAAGATGACCCCGACGGCGTCAAACTCGCCGAGAAGGATCCG TTGGAGGAAGCCAAGCGAGTGCTGGTCTCCATGACGCAGCACGCGGGCAA GGTCGTTGAGACACACACTCTGGCGTATGATGTGGCCACGAAACGAGGTA AACCCCTGCTGGCGCTGCAGGCGCTGATCCGTGCGCACGCCCTGCGTCCC TCCCATCCTGAAGTGTTTTGTCGGACAGTCGATTTTATGGCCAGCTTGAT GGATGGAGGGCAGGATGCCGGGTGGGCGAGAGGGATGCACCCGACGGTGG CTGCGGTGATAGAAGCCGAGAAGGAGGGGTTGTTGGAGGGGGGGGCAGAC CTGGGAGGGTTTGTGGAGGCATACGTTAAGAAGGCCACGGCGTGGGCGTC GTTACCACATATGTTGGCTGCCGCTCGGGGGATGGCGCGCGCACAGGTCC GGCCAGGCGCAACGGAAAAGGCGGTGGGATTGGTGATAGACGGAGTGAAG GAAGGGAAGTGCAGGGGAATGACCGTGGGGGGTTTGAAGGAGGCGCTCAG GATAGCGGAGACGGAGCTGCGGGCTGGACCGGCGGCGTTGGCGGAGATGA GGGAGGTATGCATGGAACGATTTCCCTCGGCGACCTGCTTTGCGGTGTCG TCATGA back to top
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