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Properties
Property Name | Value |
TranscriptId | 575491 |
Track | FilteredModels2 |
ProteinId | 575405 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_2 | supercontig | scaffold_2:1279340..1281357 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1121 ID=mRNA_1121|Name=jgi.p|Nanoce1779_2|575405|organism=Nannochloropsis oceanica|type=mRNA|length=1082bp CAGACAGGAATACCACCCTCCCACAACCCATGATGGGCGATCAAAGGGGC CGGGGGAAGGCCTACATGGAAGAGGCCGACAAGGCTCTGAAGCGCTTCGC CCTCTTCAACGCCAACCAAAAGTTTGAGGACGCATCAGAAGCCTACACCA AGGCAGGAAACTGCTTCAAGGTCGCCAAGGCATGGGCGGAGGGAGGGGAG GCCTTCACGAGGGCAAGTGAGTTGCATGTCAAACTTGGCAGCACGTACGA TGCGGCAAATGCAGCACAGGAAGCGGCAAACTGCTACAAAAATATCAACC CCGAGGACGCAATTGGGTCCTTTCGTCAAGCCGCGACACTCTTAATGGAA TTGGGGAAGTTTAAGCAGATCGGGAAGATTCACAAGGACATCGCCGAGAT ATACGAGAAGGAGGGGAGCTATGACGAAGCCGTGGAGAACTACATGCAGG CGGCCGAATACTTCAACAGCGAGAACAACAAGAGCAGTGCCAATGACGCC ATGCAGAAGACAGCCTTCCTCCTCACCACCACCCGTGGGGCCGCGGATCC CTCCCTTGATAACTATGCGCGTGCGGCTAATATTTTTGAGGAGATGGGCG TGGCGGCGCTGGACAACCGCCTGTTGCAGTACAATGCCAAGAGCCACTTC ATGAACGCCCTGCTTTGCTACATGGCAATGGGGGACGAGGTGGCGGTGAA GCAGAAATTGGAGCACTACAAGGCGTCGGATTACACTTTCGCCGATGCCC GCGAGTGCAAATTTATCGAGAAGCTCGTCCAGGCCTGGGAGGAAAGCAGC GCAGATGATTACACGGATCACTGTGCTGAGTACAACGCCATCTCGGCGCT CGATCCCTGGAAGACGTCGCTGTTGGTGAAGACCAAGAGGATGATCGCCG CTGTGGAACACGGGGAGGAGGACGTGGATCTGACGTAGAAGGAGGGAGGG GAGGAGAGAACCCTAGGGAAGGAAGATAGAAGGAGGGGTCGAAGTATATA AGTGGAGGGAAAAGAAGGGAGGGAGAGAGGGAGGGAAAGAGGGAGGGCGG AAGGGAAGAAAGATAGAAGGAGGGGTCGAAGT back to topprotein sequence of jgi.p|Nanoce1779_2|575405 >mRNA_1121-protein ID=mRNA_1121-protein|Name=jgi.p|Nanoce1779_2|575405|organism=Nannochloropsis oceanica|type=polypeptide|length=303bp MMGDQRGRGKAYMEEADKALKRFALFNANQKFEDASEAYTKAGNCFKVAK AWAEGGEAFTRASELHVKLGSTYDAANAAQEAANCYKNINPEDAIGSFRQ AATLLMELGKFKQIGKIHKDIAEIYEKEGSYDEAVENYMQAAEYFNSENN KSSANDAMQKTAFLLTTTRGAADPSLDNYARAANIFEEMGVAALDNRLLQ YNAKSHFMNALLCYMAMGDEVAVKQKLEHYKASDYTFADARECKFIEKLV QAWEESSADDYTDHCAEYNAISALDPWKTSLLVKTKRMIAAVEHGEEDVD LT* back to topmRNA from alignment at scaffold_2:1279340..1281357+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1121 ID=mRNA_1121|Name=jgi.p|Nanoce1779_2|575405|organism=Nannochloropsis oceanica|type=mRNA|length=2018bp|location=Sequence derived from alignment at scaffold_2:1279340..1281357+ (Nannochloropsis oceanica) CAGACAGGAATACCACCCTCCCACAACCCATGATGGGCGATCAAAGGGGC
CGGGGGAAGGCCTACATGGAAGAGGCCGACAAGGTAACATATCACAAGTA
CCCCCTTCTCTCGCCTCCCTCCTTCCAGCGTTAACCCTCTCCTATCTCAC
CTATATCCATTTCACCCAAACAGGCTCTGAAGCGCTTCGCCCTCTTCAAC
GCCAACCAAAAGTTTGAGGACGCATCAGAAGCCTACACCAAGGCAGGAAA
CTGCTTCAAGGTCGCCAAGGCATGGGCGGAGGGAGGGGAGGCCTTCACGA
GGGCAAGTGAGTTGCATGTCAAACTTGGCAGCACGTACGATGCGGCAAAT
GCAGCACAGGAAGCGGGTGAGTAATATAGCGAGGGAATGGAAAGAGGGGA
TGGAAGAGCAGGAACAGATATCCGAAGACATTGACAACATCCATTTCTTC
GTGCTGGAAGTACATGGCATTCACCCCTCCCTTTCTCCTTCTTTCGTTCC
CTCCCCTACCGCCCTCTCTCCCTTTGTCCTCCGCACAAATACAAACCCAG
CAAACTGCTACAAAAATATCAACCCCGAGGACGCAATTGGGTCCTTTCGT
CAAGCCGCGACACTCTTAATGGAATTGGGGAAGTTTAAGCAGATCGGGAA
GATTCACAAGGACATCGCCGAGATATACGAGAAGGAGGGGAGCTATGACG
AAGGTAAGGAGGGAGAGAGGGAGGGAAGGAGTGGGACGTGGGAGTAGAAA
GGATGCCGTCCATGACAACGAATTGGCTCAAATATCTATGGTTCTTTTCA
TGCCTTCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCCAT
AGCCGTGGAGAACTACATGCAGGCGGCCGAATACTTCAACAGCGAGAACA
ACAAGAGCAGTGCCAATGACGCCATGCAGAAGACAGCCTTCCTCCTCACC
ACCACCCGTGGGGCCGCGGATCCCTCCCTTGATAACTATGCGCGTGCGGC
TAATATTTTTGAGGAGGTGCGAGGGACGGGAGGGACGGGACGGACGGACG
GGCGGGCGGACGGACATAAGGGAGGGAGGATCGAAAGGCCCCATGAGAAT
GCCATTGTTTCATCGCGTCCTCCCTCTCCCCCTCCCTCCCTTCCTCTCCC
TCCCTTCCTCCTTCTCGTAGATGGGCGTGGCGGCGCTGGACAACCGCCTG
TTGCAGTACAATGCCAAGAGCCACTTCATGAACGCCCTGCTTTGCTACAT
GGCAATGGGGGACGAGGTAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGG
ATGGTGCAGTACACCTGAAAGGACTGCGCGTGATGAAGATGGGCACGGAT
TGAGGAAGCGAAGAGGGGCGTAGAGAGGATTTTAAGATGGCTTCTGTGAT
CTCTCTACGGCTCGAAACACCACCACCCCATCTTTTAATTCTTTCTTATT
TCTGTTGCCCTCCTTCCTTGTTGTATCTTTCATGCACTGCAGGTGGCGGT
GAAGCAGAAATTGGAGCACTACAAGGCGTCGGATTACACTTTCGCCGATG
CCCGCGAGTGCAAATTTATCGAGAAGCTCGTCCAGGTAGGGAGGGAGGGA
GGGAGGGAGGGAGAGAGGGAGGGAGAGAGGACGTTTCGACACGCTTACTA
ACCCTTGGCCCTCCCTCCTTTCCTTCACTCCCTCCCTCCCCCCCTCCCCC
CTCATTCCTGCCCCATAGGCCTGGGAGGAAAGCAGCGCAGATGATTACAC
GGATCACTGTGCTGAGTACAACGCCATCTCGGCGCTCGATCCCTGGAAGA
CGTCGCTGTTGGTGAAGACCAAGAGGATGATCGCCGCTGTGGAACACGGG
GAGGAGGACGTGGATCTGACGTAGAAGGAGGGAGGGGAGGAGAGAACCCT
AGGGAAGGAAGATAGAAGGAGGGGTCGAAGTATATAAGTGGAGGGAAAAG
AAGGGAGGGAGAGAGGGAGGGAAAGAGGGAGGGCGGAAGGGAAGAAAGAT
AGAAGGAGGGGTCGAAGT back to topCoding sequence (CDS) from alignment at scaffold_2:1279340..1281357+ >mRNA_1121 ID=mRNA_1121|Name=jgi.p|Nanoce1779_2|575405|organism=Nannochloropsis oceanica|type=CDS|length=6363bp|location=Sequence derived from alignment at scaffold_2:1279340..1281357+ (Nannochloropsis oceanica) ATGATGGGCGATCAAAGGGGCCGGGGGAAGGCCTACATGGAAGAGGCCGA CAAGGCTCTGAAGCGCTTCGCCCTCTTCAACGCCAACCAAAAGTTTGAGG ACGCATCAGAAGCCTACACCAAGGCAGGAAACTGCTTCAAGGTCGCCAAG GCATGGGCGGAGGGAGGGGAGGCCTTCACGAGGGCAAGTGAGTTGCATGT CAAACTTGGCAGCACGTACGATGCGGCAAATGCAGCACAGGAAGCGGCAA ACTGCTACAAAAATATCAACCCCGAGGACGCAATTGGGTCCTTTCGTCAA GCCGCGACACTCTTAATGGAATTGGGGAAGTTTAAGCAGATCGGGAAGAT TCACAAGGACATCGCCGAGATATACGAGAAGGAGGGGAGCTATGACGAAG CCGTGGAGAACTACATGCAGGCGGCCGAATACTTCAACAGCGAGAACAAC AAGAGCAGTGCCAATGACGCCATGCAGAAGACAGCCTTCCTCCTCACCAC CACCCGTGGGGCCGCGGATCCCTCCCTTGATAACTATGCGCGTGCGGCTA ATATTTTTGAGGAGATGGGCGTGGCGGCGCTGGACAACCGCCTGTTGCAG TACAATGCCAAGAGCCACTTCATGAACGCCCTGCTTTGCTACATGGCAAT GGGGGACGAGGTGGCGGTGAAGCAGAAATTGGAGCACTACAAGGCGTCGG ATTACACTTTCGCCGATGCCCGCGAGTGCAAATTTATCGAGAAGCTCGTC CAGGCCTGGGAGGAAAGCAGCGCAGATGATTACACGGATCACTGTGCTGA GTACAACGCCATCTCGGCGCTCGATCCCTGGAAGACGTCGCTGTTGGTGA AGACCAAGAGGATGATCGCCGCTGTGGAACACGGGGAGGAGGACGTGGAT CTGACGTAGATGATGGGCGATCAAAGGGGCCGGGGGAAGGCCTACATGGA AGAGGCCGACAAGGCTCTGAAGCGCTTCGCCCTCTTCAACGCCAACCAAA AGTTTGAGGACGCATCAGAAGCCTACACCAAGGCAGGAAACTGCTTCAAG GTCGCCAAGGCATGGGCGGAGGGAGGGGAGGCCTTCACGAGGGCAAGTGA GTTGCATGTCAAACTTGGCAGCACGTACGATGCGGCAAATGCAGCACAGG AAGCGGCAAACTGCTACAAAAATATCAACCCCGAGGACGCAATTGGGTCC TTTCGTCAAGCCGCGACACTCTTAATGGAATTGGGGAAGTTTAAGCAGAT CGGGAAGATTCACAAGGACATCGCCGAGATATACGAGAAGGAGGGGAGCT ATGACGAAGCCGTGGAGAACTACATGCAGGCGGCCGAATACTTCAACAGC GAGAACAACAAGAGCAGTGCCAATGACGCCATGCAGAAGACAGCCTTCCT CCTCACCACCACCCGTGGGGCCGCGGATCCCTCCCTTGATAACTATGCGC GTGCGGCTAATATTTTTGAGGAGATGGGCGTGGCGGCGCTGGACAACCGC CTGTTGCAGTACAATGCCAAGAGCCACTTCATGAACGCCCTGCTTTGCTA CATGGCAATGGGGGACGAGGTGGCGGTGAAGCAGAAATTGGAGCACTACA AGGCGTCGGATTACACTTTCGCCGATGCCCGCGAGTGCAAATTTATCGAG AAGCTCGTCCAGGCCTGGGAGGAAAGCAGCGCAGATGATTACACGGATCA CTGTGCTGAGTACAACGCCATCTCGGCGCTCGATCCCTGGAAGACGTCGC TGTTGGTGAAGACCAAGAGGATGATCGCCGCTGTGGAACACGGGGAGGAG GACGTGGATCTGACGTAGATGATGGGCGATCAAAGGGGCCGGGGGAAGGC CTACATGGAAGAGGCCGACAAGGCTCTGAAGCGCTTCGCCCTCTTCAACG CCAACCAAAAGTTTGAGGACGCATCAGAAGCCTACACCAAGGCAGGAAAC TGCTTCAAGGTCGCCAAGGCATGGGCGGAGGGAGGGGAGGCCTTCACGAG GGCAAGTGAGTTGCATGTCAAACTTGGCAGCACGTACGATGCGGCAAATG CAGCACAGGAAGCGGCAAACTGCTACAAAAATATCAACCCCGAGGACGCA ATTGGGTCCTTTCGTCAAGCCGCGACACTCTTAATGGAATTGGGGAAGTT TAAGCAGATCGGGAAGATTCACAAGGACATCGCCGAGATATACGAGAAGG AGGGGAGCTATGACGAAGCCGTGGAGAACTACATGCAGGCGGCCGAATAC TTCAACAGCGAGAACAACAAGAGCAGTGCCAATGACGCCATGCAGAAGAC AGCCTTCCTCCTCACCACCACCCGTGGGGCCGCGGATCCCTCCCTTGATA ACTATGCGCGTGCGGCTAATATTTTTGAGGAGATGGGCGTGGCGGCGCTG GACAACCGCCTGTTGCAGTACAATGCCAAGAGCCACTTCATGAACGCCCT GCTTTGCTACATGGCAATGGGGGACGAGGTGGCGGTGAAGCAGAAATTGG AGCACTACAAGGCGTCGGATTACACTTTCGCCGATGCCCGCGAGTGCAAA TTTATCGAGAAGCTCGTCCAGGCCTGGGAGGAAAGCAGCGCAGATGATTA CACGGATCACTGTGCTGAGTACAACGCCATCTCGGCGCTCGATCCCTGGA AGACGTCGCTGTTGGTGAAGACCAAGAGGATGATCGCCGCTGTGGAACAC GGGGAGGAGGACGTGGATCTGACGTAGATGATGGGCGATCAAAGGGGCCG GGGGAAGGCCTACATGGAAGAGGCCGACAAGGCTCTGAAGCGCTTCGCCC TCTTCAACGCCAACCAAAAGTTTGAGGACGCATCAGAAGCCTACACCAAG GCAGGAAACTGCTTCAAGGTCGCCAAGGCATGGGCGGAGGGAGGGGAGGC CTTCACGAGGGCAAGTGAGTTGCATGTCAAACTTGGCAGCACGTACGATG CGGCAAATGCAGCACAGGAAGCGGCAAACTGCTACAAAAATATCAACCCC GAGGACGCAATTGGGTCCTTTCGTCAAGCCGCGACACTCTTAATGGAATT GGGGAAGTTTAAGCAGATCGGGAAGATTCACAAGGACATCGCCGAGATAT ACGAGAAGGAGGGGAGCTATGACGAAGCCGTGGAGAACTACATGCAGGCG GCCGAATACTTCAACAGCGAGAACAACAAGAGCAGTGCCAATGACGCCAT GCAGAAGACAGCCTTCCTCCTCACCACCACCCGTGGGGCCGCGGATCCCT CCCTTGATAACTATGCGCGTGCGGCTAATATTTTTGAGGAGATGGGCGTG GCGGCGCTGGACAACCGCCTGTTGCAGTACAATGCCAAGAGCCACTTCAT GAACGCCCTGCTTTGCTACATGGCAATGGGGGACGAGGTGGCGGTGAAGC AGAAATTGGAGCACTACAAGGCGTCGGATTACACTTTCGCCGATGCCCGC GAGTGCAAATTTATCGAGAAGCTCGTCCAGGCCTGGGAGGAAAGCAGCGC AGATGATTACACGGATCACTGTGCTGAGTACAACGCCATCTCGGCGCTCG ATCCCTGGAAGACGTCGCTGTTGGTGAAGACCAAGAGGATGATCGCCGCT GTGGAACACGGGGAGGAGGACGTGGATCTGACGTAGATGATGGGCGATCA AAGGGGCCGGGGGAAGGCCTACATGGAAGAGGCCGACAAGGCTCTGAAGC GCTTCGCCCTCTTCAACGCCAACCAAAAGTTTGAGGACGCATCAGAAGCC TACACCAAGGCAGGAAACTGCTTCAAGGTCGCCAAGGCATGGGCGGAGGG AGGGGAGGCCTTCACGAGGGCAAGTGAGTTGCATGTCAAACTTGGCAGCA CGTACGATGCGGCAAATGCAGCACAGGAAGCGGCAAACTGCTACAAAAAT ATCAACCCCGAGGACGCAATTGGGTCCTTTCGTCAAGCCGCGACACTCTT AATGGAATTGGGGAAGTTTAAGCAGATCGGGAAGATTCACAAGGACATCG CCGAGATATACGAGAAGGAGGGGAGCTATGACGAAGCCGTGGAGAACTAC ATGCAGGCGGCCGAATACTTCAACAGCGAGAACAACAAGAGCAGTGCCAA TGACGCCATGCAGAAGACAGCCTTCCTCCTCACCACCACCCGTGGGGCCG CGGATCCCTCCCTTGATAACTATGCGCGTGCGGCTAATATTTTTGAGGAG ATGGGCGTGGCGGCGCTGGACAACCGCCTGTTGCAGTACAATGCCAAGAG CCACTTCATGAACGCCCTGCTTTGCTACATGGCAATGGGGGACGAGGTGG CGGTGAAGCAGAAATTGGAGCACTACAAGGCGTCGGATTACACTTTCGCC GATGCCCGCGAGTGCAAATTTATCGAGAAGCTCGTCCAGGCCTGGGAGGA AAGCAGCGCAGATGATTACACGGATCACTGTGCTGAGTACAACGCCATCT CGGCGCTCGATCCCTGGAAGACGTCGCTGTTGGTGAAGACCAAGAGGATG ATCGCCGCTGTGGAACACGGGGAGGAGGACGTGGATCTGACGTAGATGAT GGGCGATCAAAGGGGCCGGGGGAAGGCCTACATGGAAGAGGCCGACAAGG CTCTGAAGCGCTTCGCCCTCTTCAACGCCAACCAAAAGTTTGAGGACGCA TCAGAAGCCTACACCAAGGCAGGAAACTGCTTCAAGGTCGCCAAGGCATG GGCGGAGGGAGGGGAGGCCTTCACGAGGGCAAGTGAGTTGCATGTCAAAC TTGGCAGCACGTACGATGCGGCAAATGCAGCACAGGAAGCGGCAAACTGC TACAAAAATATCAACCCCGAGGACGCAATTGGGTCCTTTCGTCAAGCCGC GACACTCTTAATGGAATTGGGGAAGTTTAAGCAGATCGGGAAGATTCACA AGGACATCGCCGAGATATACGAGAAGGAGGGGAGCTATGACGAAGCCGTG GAGAACTACATGCAGGCGGCCGAATACTTCAACAGCGAGAACAACAAGAG CAGTGCCAATGACGCCATGCAGAAGACAGCCTTCCTCCTCACCACCACCC GTGGGGCCGCGGATCCCTCCCTTGATAACTATGCGCGTGCGGCTAATATT TTTGAGGAGATGGGCGTGGCGGCGCTGGACAACCGCCTGTTGCAGTACAA TGCCAAGAGCCACTTCATGAACGCCCTGCTTTGCTACATGGCAATGGGGG ACGAGGTGGCGGTGAAGCAGAAATTGGAGCACTACAAGGCGTCGGATTAC ACTTTCGCCGATGCCCGCGAGTGCAAATTTATCGAGAAGCTCGTCCAGGC CTGGGAGGAAAGCAGCGCAGATGATTACACGGATCACTGTGCTGAGTACA ACGCCATCTCGGCGCTCGATCCCTGGAAGACGTCGCTGTTGGTGAAGACC AAGAGGATGATCGCCGCTGTGGAACACGGGGAGGAGGACGTGGATCTGAC GTAGATGATGGGCGATCAAAGGGGCCGGGGGAAGGCCTACATGGAAGAGG CCGACAAGGCTCTGAAGCGCTTCGCCCTCTTCAACGCCAACCAAAAGTTT GAGGACGCATCAGAAGCCTACACCAAGGCAGGAAACTGCTTCAAGGTCGC CAAGGCATGGGCGGAGGGAGGGGAGGCCTTCACGAGGGCAAGTGAGTTGC ATGTCAAACTTGGCAGCACGTACGATGCGGCAAATGCAGCACAGGAAGCG GCAAACTGCTACAAAAATATCAACCCCGAGGACGCAATTGGGTCCTTTCG TCAAGCCGCGACACTCTTAATGGAATTGGGGAAGTTTAAGCAGATCGGGA AGATTCACAAGGACATCGCCGAGATATACGAGAAGGAGGGGAGCTATGAC GAAGCCGTGGAGAACTACATGCAGGCGGCCGAATACTTCAACAGCGAGAA CAACAAGAGCAGTGCCAATGACGCCATGCAGAAGACAGCCTTCCTCCTCA CCACCACCCGTGGGGCCGCGGATCCCTCCCTTGATAACTATGCGCGTGCG GCTAATATTTTTGAGGAGATGGGCGTGGCGGCGCTGGACAACCGCCTGTT GCAGTACAATGCCAAGAGCCACTTCATGAACGCCCTGCTTTGCTACATGG CAATGGGGGACGAGGTGGCGGTGAAGCAGAAATTGGAGCACTACAAGGCG TCGGATTACACTTTCGCCGATGCCCGCGAGTGCAAATTTATCGAGAAGCT CGTCCAGGCCTGGGAGGAAAGCAGCGCAGATGATTACACGGATCACTGTG CTGAGTACAACGCCATCTCGGCGCTCGATCCCTGGAAGACGTCGCTGTTG GTGAAGACCAAGAGGATGATCGCCGCTGTGGAACACGGGGAGGAGGACGT GGATCTGACGTAG back to top
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