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Properties
| Property Name | Value |
|---|
| TranscriptId | 384694 |
| Track | FilteredModels2 |
| ProteinId | 384608 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_66 | supercontig | scaffold_66:76778..78035 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11003 ID=mRNA_11003|Name=jgi.p|Nanoce1779_2|384608|organism=Nannochloropsis oceanica|type=mRNA|length=743bp
GCACCTTTTATAGACTGTATGTCGCACGTACGTGATGAATGATGATTTGG
AGGATAAGTCCCGGGAATGACTGTGTGCGTGTGCATCTATTCCGAGTCGC
TGGTGCTTTGTTCCATCAAGGCGAGTTGCAGCAGCAGCAGCAGTAGCAGC
TGTAACAGCAGCAAGTTCCTTCTTCGTCAGTCTCAATCTCTCTGCAATCT
TCACACTCAACGACAGCCAGAAAAGGGAAGGCGGGGAGGAGGTGTTAGAC
GAAAAATGCTCCCCAAAATAGCTCCTCGAGCCCTCATCAATTGCAGCAGT
CACAATCGTCGTCGGCGCTGGCTGTCCACCCTCCCTTCCTCATTTAATGT
GGACGTGTTGGTCTGCGGGGCAGGCGTTGTGGGTTTGGCTATTGCCAGGG
CGTTTGCTAGGGCAGGGCGGGAAGTGCTAGTGGTGGAGGCCGAGAAAAGC
TTTGGCACCCAAACGTCGGCACGCAACAGCGAGGTCATTCACGCAGGCAT
CTACTACCCTCCTGGCTCTCTTAAAGCCTCTCTGTGTGTGCGAGGTCGGA
AGATGCTCTATACTTTTTGCGAGGAACACGGCGTGCCCTTTCGGAGGTAG
GGAGGGAGGGAGGTAGGGAGGGAGGGAGGGCGAGGAAAGGTTTGAGTCAG
TAGGGTGCACACATCTTCGTACCTTTATCTGTAGATGCGGCAAGCTCATC
GTGGCCACCAGTGACAAGGGAGACGACGGCCAACGATTAGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|384608 >mRNA_11003-protein ID=mRNA_11003-protein|Name=jgi.p|Nanoce1779_2|384608|organism=Nannochloropsis oceanica|type=polypeptide|length=178bp
MTVCVCIYSESLVLCSIKASCSSSSSSSCNSSKFLLRQSQSLCNLHTQRQ
PEKGRRGGGVRRKMLPKIAPRALINCSSHNRRRRWLSTLPSSFNVDVLVC
GAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPG
SLKASLCVRGRKMLYTFCEEHGVPFRR* back to topmRNA from alignment at scaffold_66:76778..78035- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11003 ID=mRNA_11003|Name=jgi.p|Nanoce1779_2|384608|organism=Nannochloropsis oceanica|type=mRNA|length=1258bp|location=Sequence derived from alignment at scaffold_66:76778..78035- (Nannochloropsis oceanica)
GCACCTTTTATAGACTGTATGTCGCACGTACGTGATGAATGATGATTTGG
AGGATAAGTCCCGGGAATGACTGTGTGCGTGTGCATCTATTCCGAGTCGC
TGGTGCTTTGTTCCATCAAGGCGAGTTGCAGCAGCAGCAGCAGTAGCAGC
TGTAACAGCAGCAAGTTCCTTCTTCGTCAGTCTCAATCTCTCTGCAATCT
TCACACTCAACGACAGCCAGAAAAGGGAAGGCGGGGAGGAGGTGTTAGAC
GAAAAATGCTCCCCAAAATAGCTCCTCGAGCCCTCATCAATTGCAGCAGT
CACAATCGTCGTCGGCGCTGGCTGTCCACCCTCCCTTCCTCATTTAATGT
GGACGTGTTGGTCTGCGGGGCAGGCGTTGTGGGTTTGGCTATTGCCAGGG
CGTTTGCTAGGTAAGGAAAGATGGCATTTGTCGGGGGGCGAAAGGTCGTA
AAAGATTGAGGGAAAAGAGGGTGCATGAAGGGAAGGGGGGGGAGGTCGAG
CAGGGAGGAAGGGGTACGCATGAGAGCGTCAGTGCACTGTGAACGTCTAC
GTGTCACACAAGTCAGGACATATGAAGAGAGGTAGAATATTGGAGGAGAG
GAGTTGGGGAAGCAGAGAATGACCCTTAACCTTTGCACGTAAATTTCTAT
GTACACTACGCAGGGCAGGGCGGGAAGTGCTAGTGGTGGAGGCCGAGAAA
AGCTTTGGCACCCAAACGTCGGCACGCAACAGCGAGGTAGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGGATGAAGAAGGTAGGGTAGAACCGAAG
TGTCACCGTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTGAAGGTCATTC
ACGCAGGCATCTACTACCCTCCTGGCTCTCTTAAAGCCTCTCTGTGTGTG
CGAGGTCGGAAGATGCTCTATACTTTTTGCGAGGAACACGGCGTGCCCTT
TCGGAGGTAGGGAGGGAGGGAGGTAGGGAGGGAGGGAGGGCGAGGAAAGG
TTTGAGTCAGTAGGGTGCACACATCTTCGTACCTTTATCTGTAGATGCGG
CAAGCTCATCGTGGCCACCAGTGACAAGGGAGACGACGGCCAACGATTAG
AGGTACGTTTCCATCCTCCCTCTCTCCTTTCCTTCCTCCCTTCCTCCTTC
CCTCCCTCCCTCAGCCCCTCCCTTCCTCCCTCCCTTGCTATCTCCCGCGC
TCACTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCTTGTCTACCG
TCCTCAGG back to topCoding sequence (CDS) from alignment at scaffold_66:76778..78035- >mRNA_11003 ID=mRNA_11003|Name=jgi.p|Nanoce1779_2|384608|organism=Nannochloropsis oceanica|type=CDS|length=1602bp|location=Sequence derived from alignment at scaffold_66:76778..78035- (Nannochloropsis oceanica)
GTCATTCACGCAGGCATCTACTACCCTCCTGGCTCTCTTAAAGCCTCTCT
GTGTGTGCGAGGTCGGAAGATGCTCTATACTTTTTGCGAGGAACACGGCG
TGCCCTTTCGGAGGTAGGGCAGGGCGGGAAGTGCTAGTGGTGGAGGCCGA
GAAAAGCTTTGGCACCCAAACGTCGGCACGCAACAGCGAGATGACTGTGT
GCGTGTGCATCTATTCCGAGTCGCTGGTGCTTTGTTCCATCAAGGCGAGT
TGCAGCAGCAGCAGCAGTAGCAGCTGTAACAGCAGCAAGTTCCTTCTTCG
TCAGTCTCAATCTCTCTGCAATCTTCACACTCAACGACAGCCAGAAAAGG
GAAGGCGGGGAGGAGGTGTTAGACGAAAAATGCTCCCCAAAATAGCTCCT
CGAGCCCTCATCAATTGCAGCAGTCACAATCGTCGTCGGCGCTGGCTGTC
CACCCTCCCTTCCTCATTTAATGTGGACGTGTTGGTCTGCGGGGCAGGCG
TTGTGGGTTTGGCTATTGCCAGGGCGTTTGCTAGGTCATTCACGCAGGCA
TCTACTACCCTCCTGGCTCTCTTAAAGCCTCTCTGTGTGTGCGAGGTCGG
AAGATGCTCTATACTTTTTGCGAGGAACACGGCGTGCCCTTTCGGAGGTA
GGGCAGGGCGGGAAGTGCTAGTGGTGGAGGCCGAGAAAAGCTTTGGCACC
CAAACGTCGGCACGCAACAGCGAGATGACTGTGTGCGTGTGCATCTATTC
CGAGTCGCTGGTGCTTTGTTCCATCAAGGCGAGTTGCAGCAGCAGCAGCA
GTAGCAGCTGTAACAGCAGCAAGTTCCTTCTTCGTCAGTCTCAATCTCTC
TGCAATCTTCACACTCAACGACAGCCAGAAAAGGGAAGGCGGGGAGGAGG
TGTTAGACGAAAAATGCTCCCCAAAATAGCTCCTCGAGCCCTCATCAATT
GCAGCAGTCACAATCGTCGTCGGCGCTGGCTGTCCACCCTCCCTTCCTCA
TTTAATGTGGACGTGTTGGTCTGCGGGGCAGGCGTTGTGGGTTTGGCTAT
TGCCAGGGCGTTTGCTAGGTCATTCACGCAGGCATCTACTACCCTCCTGG
CTCTCTTAAAGCCTCTCTGTGTGTGCGAGGTCGGAAGATGCTCTATACTT
TTTGCGAGGAACACGGCGTGCCCTTTCGGAGGTAGGGCAGGGCGGGAAGT
GCTAGTGGTGGAGGCCGAGAAAAGCTTTGGCACCCAAACGTCGGCACGCA
ACAGCGAGATGACTGTGTGCGTGTGCATCTATTCCGAGTCGCTGGTGCTT
TGTTCCATCAAGGCGAGTTGCAGCAGCAGCAGCAGTAGCAGCTGTAACAG
CAGCAAGTTCCTTCTTCGTCAGTCTCAATCTCTCTGCAATCTTCACACTC
AACGACAGCCAGAAAAGGGAAGGCGGGGAGGAGGTGTTAGACGAAAAATG
CTCCCCAAAATAGCTCCTCGAGCCCTCATCAATTGCAGCAGTCACAATCG
TCGTCGGCGCTGGCTGTCCACCCTCCCTTCCTCATTTAATGTGGACGTGT
TGGTCTGCGGGGCAGGCGTTGTGGGTTTGGCTATTGCCAGGGCGTTTGCT
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