|
|
Properties
| Property Name | Value |
|---|
| TranscriptId | 384799 |
| Track | FilteredModels2 |
| ProteinId | 384713 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_66 | supercontig | scaffold_66:74197..77297 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11002 ID=mRNA_11002|Name=jgi.p|Nanoce1779_2|384713|organism=Nannochloropsis oceanica|type=mRNA|length=549bp
AGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGGAAGAGAGGGAGGGAAG
GGAGGGAGGGAAGGGAGGGAGGGAAGGGAGAGAGAAATGTGCAAATGTTT
GAGGTTTTTCACTCTCCTTTCTATTTCGCGGGTGTGCTCTGTGCCGTGCT
TCTTACCTTCTCCCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CTCGGTCTTCTCAGAGTCCCCACGATAAGACAGCCAGCGATTTTATTTTG
GAGGGCGGTCCCTCTTCTTCCGGAGGAGGGAGAGAGGGAGGGATGGAGGG
TATCATCAATTGTGTGGGAATTGAGAGTCCTGGCTTGACGGCGTCGCTGG
CTATTGCGGAGTGGGTGAAACAAAGAGCGATGGGGTGAGGAGGAGTAGAA
GGCGGGTGGGGGGTATAATCTTGTTCTGACTCTAATACATTGATCATATT
TATTAAGTAGAAAAGTGCATAGATGCAAGCCATCAAGTGGATTATCAAAG
CCTGTGAATACAAGAGAGATTGAAACGAAATATGTCAGATGGTTTGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|384713 >mRNA_11002-protein ID=mRNA_11002-protein|Name=jgi.p|Nanoce1779_2|384713|organism=Nannochloropsis oceanica|type=polypeptide|length=98bp
MFEVFHSPFYFAGVLCAVLLTFSPSLPPSLPPSLPPRSSQSPHDKTASDF
ILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQRAMG* back to topmRNA from alignment at scaffold_66:74197..77297- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11002 ID=mRNA_11002|Name=jgi.p|Nanoce1779_2|384713|organism=Nannochloropsis oceanica|type=mRNA|length=3101bp|location=Sequence derived from alignment at scaffold_66:74197..77297- (Nannochloropsis oceanica)
AGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGATGAAGAAGGTAGG
GTAGAACCGAAGTGTCACCGTCCCTCCCTCTCTCCCTCCCTCCCTCCCTC
TGAAGGTCATTCACGCAGGCATCTACTACCCTCCTGGCTCTCTTAAAGCC
TCTCTGTGTGTGCGAGGTCGGAAGATGCTCTATACTTTTTGCGAGGAACA
CGGCGTGCCCTTTCGGAGGTAGGGAGGGAGGGAGGTAGGGAGGGAGGGAG
GGCGAGGAAAGGTTTGAGTCAGTAGGGTGCACACATCTTCGTACCTTTAT
CTGTAGATGCGGCAAGCTCATCGTGGCCACCAGTGACAAGGGAGACGACG
GCCAACGATTAGAGGTACGTTTCCATCCTCCCTCTCTCCTTTCCTTCCTC
CCTTCCTCCTTCCCTCCCTCCCTCAGCCCCTCCCTTCCTCCCTCCCTTGC
TATCTCCCGCGCTCACTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCT
CCTTGTCTACCGTCCTCAGGCCCTGTACCACCAAGCTCACTCTAACGGCA
TCATCGACCTTCAACGGCTTTCTTCCGTGACGTCGCTTCGCATGGAGCCT
CACGTCCACTGCATGCAGGTACTCCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCTTTCCTCCCCTCTCTCCCTCCCTCCCTCTTCATGGCCGTGATG
CCGGCCTCGTCAAGCTTGTCAGAATGACTTTCATATCTCCCCTCATTTCC
TCCCTGTTAAAATTAAGTCATGATCGTGCCTTCTTCTTTCCCCCCCCGCC
TCCTTCTCACTTTCTCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCCCAGGCCCTCTTCTCCCCATCGACCGGTATCT
AGACAGTCACCAATTTATGCTTGCACTCCTGGGAGATGCTGAGGTAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGAGAAGGGAGTGGGAAAAATAATAAT
GAATTAAAAGTTACTTCCCTCCCTCCTTCCCTCCCTCCCTCTCTCTCTCT
CTCTCTCTCCTCTCTCCCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCCC
TCTCTCTCTCTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCCCTCTCTCCC
TCTCTCCCTCCCTCCCTCAGGATCATGGTGCCTCTATCGCTTACCGTAGC
CGTGTGCAGATTAAGGAGGTCTCACCCGCCGGATTCGTGAGCCTCACGAC
GGTCGAGGGAGAGGGGAAGGAGGTGGGGGAAAGAGGGAGAGAGAGCGAGA
GGGAGGGAGGGAGGGAGAGAGGGAGGGAAGGAAGCAACATTTTAATTCAT
CGTGATTGGTTAGGGAAGGATGGAGGGAGGGGGAGAGAAAGGGATGGAGG
GGAGGGCCCAGGGCCGAGTCAATATTCGTTTAAAACGGAAAGGAAATCGG
TCCTTTTTTTGCTGATCCCCCTCTCCCCCTCGTTCTCCCTCCTTCCAGCC
CTCCACGGACCTTCGCCCGCGCCTCTTCATCAACACCACGGGCCTCTCCG
CCCTCCCTCTCGCCCGTCAAATCGGACGCCGACCAGCGGTAAGCAAGCCC
TCCCTCCTTCCCTCTCTGTCTCCCTCCCTCCCTCTCTCCTTATTCTCCGC
TCCCTTCTCCTTTCCCGGTGCTCAATTACTCTTCCCTTCTTTTCCCCCTC
CTTTTCTCCGCTCACAGGGCCTTCCTCCCTTCCCCCCACCCTCCTATGCC
AAAGGCAACTACTTCCGCCTCGGTCCCCCCCCCCCTCCCTTCCTCCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCATTTAACTGCCTCGTCTATCCGTTA
CCGGAAACGGCTGGGCTAGGCATTCATGCCACCATCGACCTCGGGGGGCA
AGTCCGTTTCGGTCCTGACGTGGAGTGGGTGTCAGACCCAGGCACGTACC
TCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTATGATAT
TGCTTCGTATTGCAATGGGTAGGGAGGGAGGGAGGAAGGGGAGGAGGGAG
GGAGGAAGGGAGAAGAAAGCGAAGAAAGAGAAGATCTAAATTGAGTCGGT
GGAAAATCACTATGATGGCAACTTCGAAACTTGGATTCTGATCACCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCGTACAGACGACCTCTCCGTAAACCCG
TCTCGCGCCGAGGTGAGTGCTGGATTGTACTTTCTGGTCTCATCTGAACC
TCCCCTTCCCTCCTTCCCTCCCTCCTCCTATCCTTCCTCCCCTCCCTCCC
TCCCTCCCTCCCTCCTATCCCTCCGCCCTCCTCAATATTAACTTTGTCCG
GGTCTCTTACCCTTCCCTTACTCCCTCCTTCCCTCCCTTCCCAGTCCTTC
TACGCCTCCATCCGGCGTTACTTTCCTTCCTTGCAAGACGGACAACTCGT
CGCCGACTACGCAGGAATCAGACCCAAGATCCAGGCGAGGGAGGGAGGGA
GGGAGGGAGAGAGGGAGGGAAGGGAGGGGTGGTTCAGAAAACGGAAAAGG
AAAGAGGGCTGGGAATGAAGAGGAAGGGAGGGAGGGAAGAGAGGGAGGGA
AGGGAGGGAGGGAAGGGAGGGAGGGAAGGGAGAGAGAAATGTGCAAATGT
TTGAGGTTTTTCACTCTCCTTTCTATTTCGCGGGTGTGCTCTGTGCCGTG
CTTCTTACCTTCTCCCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCTCGGTCTTCTCAGAGTCCCCACGATAAGACAGCCAGCGATTTTATTT
TGGAGGGCGGTCCCTCTTCTTCCGGAGGAGGGAGAGAGGGAGGGATGGAG
GGTATCATCAATTGTGTGGGAATTGAGAGTCCTGGCTTGACGGCGTCGCT
GGCTATTGCGGAGTGGGTGAAACAAAGAGCGATGGGGTGAGGAGGAGTAG
AAGGCGGGTGGGGGGTATAATCTTGTTCTGACTCTAATACATTGATCATA
TTTATTAAGTAGAAAAGTGCATAGATGCAAGCCATCAAGTGGATTATCAA
AGCCTGTGAATACAAGAGAGATTGAAACGAAATATGTCAGATGGTTTGGG
G back to topCoding sequence (CDS) from alignment at scaffold_66:74197..77297- >mRNA_11002 ID=mRNA_11002|Name=jgi.p|Nanoce1779_2|384713|organism=Nannochloropsis oceanica|type=CDS|length=294bp|location=Sequence derived from alignment at scaffold_66:74197..77297- (Nannochloropsis oceanica)
ATGTTTGAGGTTTTTCACTCTCCTTTCTATTTCGCGGGTGTGCTCTGTGC
CGTGCTTCTTACCTTCTCCCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCTCGGTCTTCTCAGAGTCCCCACGATAAGACAGCCAGCGATTTT
ATTTTGGAGGGCGGTCCCTCTTCTTCCGGAGGAGGGAGAGAGGGAGGGAT
GGAGGGTATCATCAATTGTGTGGGAATTGAGAGTCCTGGCTTGACGGCGT
CGCTGGCTATTGCGGAGTGGGTGAAACAAAGAGCGATGGGGTGA back to top
|