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Properties
| Property Name | Value |
|---|
| TranscriptId | 612763 |
| Track | FilteredModels2 |
| ProteinId | 612677 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_66 | supercontig | scaffold_66:68249..71430 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10999 ID=mRNA_10999|Name=jgi.p|Nanoce1779_2|612677|organism=Nannochloropsis oceanica|type=mRNA|length=1827bp
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGTCGATCTTGGCG
TCGTTGGGGAGATTGCAGACGCAAGCGACTTACTTCCAGAGGTGTGGAGG
GCGGACGGGGGAAAGCATGAGCAAGAAAGAAGAAGAGGCCATGGTGGATG
ATCTACTCCTCTTCACCAAGGTCTCTGACACCCACGAAATGATCCAAGGG
CAGCTCCAACGGCACCAGGAGAGGTACTTCCTCGAGTTCAAAGCCTTTAA
TGCCGTCGAGGGGAAGCTTGTCAGCGAGAGCACACAGGCGGCTGCTGCTG
TTTGTCGTACCCAAGGGGGAAAAGGGGGCGTGAAAGGAGCCCGGGCAGCC
TTGGTAGCCCTTCTTTCTGGAGGAGGAGGGGGAGGTGATAAGGGTGCTAA
TACGCAGGAGAAGGAGAAGGCCGCAGCGCAGGCCCGGTACGCACATATCC
TCGGCGCCCTCCGCTTCGAGAGCCTCCCCCTCCTTGCACTAGTTCAGGGG
CGGAAGACTACCTATTCCTTTATGCCTCAAATCAACGCCAGCGCCGCGCA
GGGAAGCATGGCCCAGAGACGCACTGTCCATATAATGCGCGAAGTCGCAG
CGCTTTCCACCAGCTTGCCTGTGGAATATGGGTCGGGTAAGGAGGCAGGG
AGAAGGAAGAGGAAGGGAGGGAGAGAGAAGAAATCTACGACTAAATCGTC
GCTTTCTTTTACACACTCACCCTTATGTTTCCTTGACATATATTCATGTT
TGATTTTCATTTAAATGGTCTGGATCGTTATTTCCGTCTTCCACGCCAAA
TAGGAATCTTTGTTCGAGTCGACGAGGAACGCCCTGACGCATTGAAGGCA
CTCATCACAGGCCCCGCGGGCACGCCCTACAGCTTCGGCTGCTTCGAGTT
CGACATCTTCCTGCCCACCAACTACCCGGCCTCGCCGCCTTCCGTCAAGT
TCTTGACAACGGGCGGAGGGACGTGGAGGTGTAATCCCAACCTGTACCAG
TGTGGAAAAGTCTGCCTCTCTCTCCTCGGGACCTGGTCCGGTCCCGGCTG
GAATCCTGCGAAATCAACTCTGCTCCAAGTCCTCGTCAGCATCCAGTCCC
TCATCTTCGTGCCCGACCCGTACTTCAATGAGCCAGGGTACCAACGCTCC
ATGGGTACTCCATCGGGGATCGTGGCTTCTAACCATTACAACCAAGCCGT
GCGTTTCGGTACTTTGCATCATGCAATTTTGAATCAGATGCGGTTTCCTT
CCCCTGTATTCAAGGATGTGTGTCTTAAGCATTTCGCGTTGAAAAAGACG
GAGATTCTGTCTCAGTGTCAAAAATGGATGAAGGAGGGAGGACCACGGGC
AGGGACGACTGCGCGGACGGATACAGCGATGACGGTTCCGATGTGGCGAT
CTGTGTGCGGGGGAATCGAGCAGATTTATAAGACCAAGGAGGCTTCGATG
TGGCTAGAGGGGTGACGACGGAGAGGGAATGGAGGGATGGTCGAACAATT
GATTAGAAAAATATCAGAATGACTTGACTGGCGTTGATATGGAAGCGAGC
GACTTATTCCTGCCGATCACATGTGATTGTCTTACGATATCTCGCTTGAG
ATATGTTGAAACTTGATAGCACTAAGGTAGTGATCAGATAAAAGGGACGA
GAGTTTGGAGGGTGGAAGAAAGGTCGGACAGCAGGAAGGGCAAAAGGAAG
ATGAAAATTAGATATGCGAAATTGAGAAGCAGAAGGCTGATCACTCAAAT
CACGACATCACCAAAAAAACTAACATAACTGTGGGTTGTAAACATTCGCT
TTTTCTTCTGTCGGTGCATCACTACCA back to topprotein sequence of jgi.p|Nanoce1779_2|612677 >mRNA_10999-protein ID=mRNA_10999-protein|Name=jgi.p|Nanoce1779_2|612677|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MFDFHLNGLDRYFRLPRQIGIFVRVDEERPDALKALITGPAGTPYSFGCF
EFDIFLPTNYPASPPSVKFLTTGGGTWRCNPNLYQCGKVCLSLLGTWSGP
GWNPAKSTLLQVLVSIQSLIFVPDPYFNEPGYQRSMGTPSGIVASNHYNQ
AVRFGTLHHAILNQMRFPSPVFKDVCLKHFALKKTEILSQCQKWMKEGGP
RAGTTARTDTAMTVPMWRSVCGGIEQIYKTKEASMWLEG* back to topmRNA from alignment at scaffold_66:68249..71430- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10999 ID=mRNA_10999|Name=jgi.p|Nanoce1779_2|612677|organism=Nannochloropsis oceanica|type=mRNA|length=3182bp|location=Sequence derived from alignment at scaffold_66:68249..71430- (Nannochloropsis oceanica)
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGTCGATCTTGGCG
TCGTTGGGGAGATTGCAGACGCAAGCGACTTACTTCCAGAGGTGTGGAGG
GCGGACGGGGGAAAGCATGAGCAAGAAAGAAGAAGAGGCCATGGTGGATG
TACGTAGTCCGCCCGCCCACCCTCCCTCCCTTCCTCCTTCCCTCCCTCGA
TGATGTTCGCCTCACCAAGTCCGTCTTTTTGACACACTTATCTTCCTACT
GTCCTTCAAAAGATCACGCCACCTACTCACCGCACCCCTCCTCCCTCCCT
CCCTCACTCACTCACTCACTCTTTCAGGATCTACTCCTCTTCACCAAGGT
CTCTGACACCCACGAAATGATCCAAGGGCAGCTCCAACGGCACCAGGAGA
GGTACTTCCTCGAGTTCAAAGTAAGAAGGGAGGGGAAAGAGGGGGGGAGG
GAGTAGGGGAGAGAGGGAGGGAGGAAAGAAATGTTTTTTATCAATGGAAT
CAATTTATTGATTTATTATTTGTTTATTTATGTTTATTTGGTTCATATAT
AGATTCATTCGTCAATCCATGCCTCTTCATCTTTCTTCATGCAGGCCTTT
AATGCCGTCGAGGGGAAGCTTGTCAGCGAGAGCACACAGGCGGCTGCTGC
TGTTTGTCGTACCCAAGGGGGAAAAGGGGGCGTGAAAGGAGCCCGGGCAG
CCTTGGTAGCCCTTCTTTCTGGAGGAGGAGGGGGAGGTGATAAGGGTGCT
AATACGCAGGAGAAGGAGAAGGCCGCAGCGCAGGTATGTCTTCTAATATA
TGCTTTCCGATCTCTTGATAACCACGACTTACCATCCTCCCCTCCCCCCT
TCCTTCCCTCCCACCCTTCCCTCTATCCCTCCCACGCCCACAGGCCCGGT
ACGCACATATCCTCGGCGCCCTCCGCTTCGAGAGCCTCCCCCTCCTTGCA
CTAGTTCAGGGGCGGAAGACTACCTATTCCTTTATGCCTCAAATCAACGC
CAGCGCCGCGCAGGGAAGGTAAGCTTCCCTTCCTCCCTCCTTCCCTTCCT
CCCTCCTTCCCTCCCTCCCTCGCCACGCATGGAGAGTAGGCGCGCGACAC
CTTCCCTCTTCCCTCTCTCCGCTTTCGTTTTCATGAAGCTAAAGAATGTA
ACCCGAACATACCTTCCCTTCGGCCCTCCCTCCCTCCCTCTTTCCCTCCC
TCCCTCCCTCAGCATGGCCCAGAGACGCACTGTCCATATAATGCGCGAAG
TCGCAGCGCTTTCCACCAGCTTGCCTGTGGAATATGGGTCGGGTAAGGAG
GCAGGGAGAAGGAAGAGGAAGGGAGGGAGAGAGAAGAAATCTACGACTAA
ATCGTCGCTTTCTTTTACACACTCACCCTTATGTTTCCTTGACATATATT
CATGTTTGATTTTCATTTAAATGGTCTGGATCGTTATTTCCGTCTTCCAC
GCCAAATAGGAATCTTTGTTCGAGTCGACGAGGAACGCCCTGACGCATTG
AAGGTAAGCGGAGCCAAGGAAGGAAGGCAGGAAGGGAGTAGGTGAGGGAG
GGAAAGAAAAGAGAGGGGGTATCAATCGAAGTGCTAGCTTTTGACATGGT
TCCCTATCTTTTCTCATCACATTTGCCAGCACGATCTTTCATGTGTCACA
CGCACCCAATCAACTACTTCCCCCAACCCACCCACGTACACACCCACACA
CTCCCAAAGGCACTCATCACAGGCCCCGCGGGCACGCCCTACAGCTTCGG
CTGCTTCGAGTTCGACATCTTCCTGCCCACCAACTACCCGGCCTCGCCGC
CTTCCGTCAAGTTCTTGACAACGGGCGGAGGGACGTGGAGGTGTAATCCC
AACCTGTACCAGGTCTGTCTCCGTCTAGGACTCGCGTACTTTCCCTTTCC
GCCCTTGAATACGATTGTTCGTCTTCCTTTCTTTGCCTTTCTTTGCTTGC
GCGTCTGGTGTCCATAATTTCATTTCTGCCTTTTCGTTCATCCGGCACGC
AGAATGAGGTGGCCCTTCCATCATATCCCACCCTTCATTCAGGCACACCC
ACTCTTGTCTCTCTCCATTCCCCCTCTCCTGCTGTAGTGTTGTGTCTCTC
TCAAAGCCCTTTCGGTCTGGAAAACCATGACACGCTGTATATATACACAC
ACATATTTGTCAAAGTTACTCACATTCCCCGCCCTTACAATACAGTGTGG
AAAAGTCTGCCTCTCTCTCCTCGGGACCTGGTCCGGTCCCGGCTGGAATC
CTGCGAAATCAACTCTGCTCCAAGTCCTCGTCAGCATCCAGTCCCTCATC
TTCGTGCCCGACCCGTACTTCAATGAGGTACATACGCCAGACGCTATATG
GATGCTGACTCTTTTCTGACTTTCCCTCCTCCCTTCTTCGTGAGCTCAGT
CTCCTTGTTGATCGCTTCTCTGCTGATAACCTTGGATCTCACCTTTTCTC
TTTCCCTCCCTCTCCACTTCCCTCCCTCCTTTCACAGCCAGGGTACCAAC
GCTCCATGGGTACTCCATCGGGGATCGTGGCTTCTAACCATTACAACCAA
GCCGTGCGTTTCGGTACTTTGCATCATGCAATTTTGAATCAGATGCGGTT
TCCTTCCCCTGTATTCAAGGATGTGTGTCTTAAGCATTTCGCGTTGAAAA
AGACGGAGATTCTGTCTCAGTGTCAAAAATGGATGAAGGAGGGAGGACCA
CGGGCAGGGACGACTGCGCGGACGGATACAGCGATGACGGTTCCGATGTG
GCGATCTGTGTGCGGGGGAATCGAGCAGATTTATAAGACCAAGGAGGCTT
CGATGTGGCTAGAGGGGTGACGACGGAGAGGGAATGGAGGGATGGTCGAA
CAATTGATTAGAAAAATATCAGAATGACTTGACTGGCGTTGATATGGAAG
CGAGCGACTTATTCCTGCCGATCACATGTGATTGTCTTACGATATCTCGC
TTGAGATATGTTGAAACTTGATAGCACTAAGGTAGTGATCAGATAAAAGG
GACGAGAGTTTGGAGGGTGGAAGAAAGGTCGGACAGCAGGAAGGGCAAAA
GGAAGATGAAAATTAGATATGCGAAATTGAGAAGCAGAAGGCTGATCACT
CAAATCACGACATCACCAAAAAAACTAACATAACTGTGGGTTGTAAACAT
TCGCTTTTTCTTCTGTCGGTGCATCACTACCA back to topCoding sequence (CDS) from alignment at scaffold_66:68249..71430- >mRNA_10999 ID=mRNA_10999|Name=jgi.p|Nanoce1779_2|612677|organism=Nannochloropsis oceanica|type=CDS|length=2880bp|location=Sequence derived from alignment at scaffold_66:68249..71430- (Nannochloropsis oceanica)
CCAGGGTACCAACGCTCCATGGGTACTCCATCGGGGATCGTGGCTTCTAA
CCATTACAACCAAGCCGTGCGTTTCGGTACTTTGCATCATGCAATTTTGA
ATCAGATGCGGTTTCCTTCCCCTGTATTCAAGGATGTGTGTCTTAAGCAT
TTCGCGTTGAAAAAGACGGAGATTCTGTCTCAGTGTCAAAAATGGATGAA
GGAGGGAGGACCACGGGCAGGGACGACTGCGCGGACGGATACAGCGATGA
CGGTTCCGATGTGGCGATCTGTGTGCGGGGGAATCGAGCAGATTTATAAG
ACCAAGGAGGCTTCGATGTGGCTAGAGGGGTGATGTGGAAAAGTCTGCCT
CTCTCTCCTCGGGACCTGGTCCGGTCCCGGCTGGAATCCTGCGAAATCAA
CTCTGCTCCAAGTCCTCGTCAGCATCCAGTCCCTCATCTTCGTGCCCGAC
CCGTACTTCAATGAGGCACTCATCACAGGCCCCGCGGGCACGCCCTACAG
CTTCGGCTGCTTCGAGTTCGACATCTTCCTGCCCACCAACTACCCGGCCT
CGCCGCCTTCCGTCAAGTTCTTGACAACGGGCGGAGGGACGTGGAGGTGT
AATCCCAACCTGTACCAGATGTTTGATTTTCATTTAAATGGTCTGGATCG
TTATTTCCGTCTTCCACGCCAAATAGGAATCTTTGTTCGAGTCGACGAGG
AACGCCCTGACGCATTGAAGCCAGGGTACCAACGCTCCATGGGTACTCCA
TCGGGGATCGTGGCTTCTAACCATTACAACCAAGCCGTGCGTTTCGGTAC
TTTGCATCATGCAATTTTGAATCAGATGCGGTTTCCTTCCCCTGTATTCA
AGGATGTGTGTCTTAAGCATTTCGCGTTGAAAAAGACGGAGATTCTGTCT
CAGTGTCAAAAATGGATGAAGGAGGGAGGACCACGGGCAGGGACGACTGC
GCGGACGGATACAGCGATGACGGTTCCGATGTGGCGATCTGTGTGCGGGG
GAATCGAGCAGATTTATAAGACCAAGGAGGCTTCGATGTGGCTAGAGGGG
TGATGTGGAAAAGTCTGCCTCTCTCTCCTCGGGACCTGGTCCGGTCCCGG
CTGGAATCCTGCGAAATCAACTCTGCTCCAAGTCCTCGTCAGCATCCAGT
CCCTCATCTTCGTGCCCGACCCGTACTTCAATGAGGCACTCATCACAGGC
CCCGCGGGCACGCCCTACAGCTTCGGCTGCTTCGAGTTCGACATCTTCCT
GCCCACCAACTACCCGGCCTCGCCGCCTTCCGTCAAGTTCTTGACAACGG
GCGGAGGGACGTGGAGGTGTAATCCCAACCTGTACCAGATGTTTGATTTT
CATTTAAATGGTCTGGATCGTTATTTCCGTCTTCCACGCCAAATAGGAAT
CTTTGTTCGAGTCGACGAGGAACGCCCTGACGCATTGAAGCCAGGGTACC
AACGCTCCATGGGTACTCCATCGGGGATCGTGGCTTCTAACCATTACAAC
CAAGCCGTGCGTTTCGGTACTTTGCATCATGCAATTTTGAATCAGATGCG
GTTTCCTTCCCCTGTATTCAAGGATGTGTGTCTTAAGCATTTCGCGTTGA
AAAAGACGGAGATTCTGTCTCAGTGTCAAAAATGGATGAAGGAGGGAGGA
CCACGGGCAGGGACGACTGCGCGGACGGATACAGCGATGACGGTTCCGAT
GTGGCGATCTGTGTGCGGGGGAATCGAGCAGATTTATAAGACCAAGGAGG
CTTCGATGTGGCTAGAGGGGTGATGTGGAAAAGTCTGCCTCTCTCTCCTC
GGGACCTGGTCCGGTCCCGGCTGGAATCCTGCGAAATCAACTCTGCTCCA
AGTCCTCGTCAGCATCCAGTCCCTCATCTTCGTGCCCGACCCGTACTTCA
ATGAGGCACTCATCACAGGCCCCGCGGGCACGCCCTACAGCTTCGGCTGC
TTCGAGTTCGACATCTTCCTGCCCACCAACTACCCGGCCTCGCCGCCTTC
CGTCAAGTTCTTGACAACGGGCGGAGGGACGTGGAGGTGTAATCCCAACC
TGTACCAGATGTTTGATTTTCATTTAAATGGTCTGGATCGTTATTTCCGT
CTTCCACGCCAAATAGGAATCTTTGTTCGAGTCGACGAGGAACGCCCTGA
CGCATTGAAGCCAGGGTACCAACGCTCCATGGGTACTCCATCGGGGATCG
TGGCTTCTAACCATTACAACCAAGCCGTGCGTTTCGGTACTTTGCATCAT
GCAATTTTGAATCAGATGCGGTTTCCTTCCCCTGTATTCAAGGATGTGTG
TCTTAAGCATTTCGCGTTGAAAAAGACGGAGATTCTGTCTCAGTGTCAAA
AATGGATGAAGGAGGGAGGACCACGGGCAGGGACGACTGCGCGGACGGAT
ACAGCGATGACGGTTCCGATGTGGCGATCTGTGTGCGGGGGAATCGAGCA
GATTTATAAGACCAAGGAGGCTTCGATGTGGCTAGAGGGGTGATGTGGAA
AAGTCTGCCTCTCTCTCCTCGGGACCTGGTCCGGTCCCGGCTGGAATCCT
GCGAAATCAACTCTGCTCCAAGTCCTCGTCAGCATCCAGTCCCTCATCTT
CGTGCCCGACCCGTACTTCAATGAGGCACTCATCACAGGCCCCGCGGGCA
CGCCCTACAGCTTCGGCTGCTTCGAGTTCGACATCTTCCTGCCCACCAAC
TACCCGGCCTCGCCGCCTTCCGTCAAGTTCTTGACAACGGGCGGAGGGAC
GTGGAGGTGTAATCCCAACCTGTACCAGATGTTTGATTTTCATTTAAATG
GTCTGGATCGTTATTTCCGTCTTCCACGCCAAATAGGAATCTTTGTTCGA
GTCGACGAGGAACGCCCTGACGCATTGAAG back to top
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