|
|
Properties
| Property Name | Value |
| TranscriptId | 612740 |
| Track | FilteredModels2 |
| ProteinId | 612654 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_66 | supercontig | scaffold_66:49405..51672 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10994 ID=mRNA_10994|Name=jgi.p|Nanoce1779_2|612654|organism=Nannochloropsis oceanica|type=mRNA|length=1534bp CAGGCATTATTCGCCGCAGCAGCAGTACAGCAGCAACAGCAGTACAATAG ATAGTCCATGGCTTCTTGCTATGGTGGTGTGAAGGGAGGAGCGATCAAGA ACGATGGACGAAAAGATGGGCATTTGCTTCCCTATTTACCCATACAAACC AGCCTTAAGAACGGGATGAAGGTGGAAGTCGATTTCTATCGGGAGAATGA ATATCATGTAGGCTGGGCACTTTTGAACAAGGAGCTTGAGGAGGGAAGGT CCTGGCCATTTTGGGGGGCCTACTTCCTTTCGCATAACGCCTTCGTCGTG CGTGCCGTCAAGGGTGGCGGAGAAGCATGCGTCGGTGCTGAAAGTAATGG AAAAGAAGGAGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGCACCTATT ACATCAAACCGAACTTCCCGGATCGCTGCGCCCACATATGTAATGGCGGA CTAATTACCGAGGAAAGGATGCGGGGTCACGGCGTGGGCACCGTTATGGC TCTCTCCTTCCTGCGCATTGCAAAGGACCTTGGCTATAAGGCTTCGTATT TTAATCTCGTTTTTGCGACGAATACGGTATCAATCGCGCTGTGGGAGAAA ACCGGCTTTCGGCGTCTTGCCACCATTCCGGCGGCAGCTCGGCTAAAAGG GGAGGAGAGTCTGGTGGATGCCTACATGTACCACTACGATCTGACAACGT ACACGGAGCTTGGGCCTCTGTCGCTGGAAGACGCCGCTGTGGAATCGCGG AGGGCCATCGAATTCAGCTAAGCTTGAATAAGTGAGACGTGACTGAGTTA GCGTGTCACGTGATCCTGCCACGTGGTGGCGCTTCATCGTATTATCTGGG TGAATGTATCGTTATCACAAGGTCTTAAGACTTGCTCACGCCTCTGCGTT TTTGTGTTAACGTGAGGGATGATGAACCAATGAATGGATGCATGAGACTG TCGGGGCAAGTCTCGCTCACAAACTTGATGTGCGATAGAGTTGTGGTACG CGACAAAAACCATCATGCGGCCGACTCAGACGGGTAACTGTCTTAAGCCA ATCCGCACACAGCTCAAGGACCATCGGCGCCTTGGTATCTCCCTCTCAGG TAACGATCACTCACCTGTGGGATAGACACTCAAAAATAAAACAATAACAT CATTTCCTTGAAAACCAAGCCATGCTAGGGCTTCATTTAATCGCTATAAT AATAAAGGGTTCTAGACACACCCAAGGCATCGTCGGATCTCCGGATCCGG GGCCAGTATAGTGGCATAAGGGTTGACTGCCCCGCACTTCACCTGCATGC CTTTAAATGCGACTGTGCATATGTGATGTGATGGCCTTGCTGAGAGCCCT TTGCGAACATTACGAGCTCAAAATCAAAAATTACCCTTATCTCTGCAGCT GCCTCTCTTGAGACCGCACTTTTCCTCTTTCTCCTTGAGTCCCTCACCGC CTTGGCCCCTCTATAAAAACTATAAAACATTGAATTAAAAAAGGGAAAAG CGAAGAATGAAGTGTGCTGGATGTAACCAATCTT back to topprotein sequence of jgi.p|Nanoce1779_2|612654 >mRNA_10994-protein ID=mRNA_10994-protein|Name=jgi.p|Nanoce1779_2|612654|organism=Nannochloropsis oceanica|type=polypeptide|length=238bp MASCYGGVKGGAIKNDGRKDGHLLPYLPIQTSLKNGMKVEVDFYRENEYH VGWALLNKELEEGRSWPFWGAYFLSHNAFVVRAVKGGGEACVGAESNGKE GVEGDEGASVLGTYYIKPNFPDRCAHICNGGLITEERMRGHGVGTVMALS FLRIAKDLGYKASYFNLVFATNTVSIALWEKTGFRRLATIPAAARLKGEE SLVDAYMYHYDLTTYTELGPLSLEDAAVESRRAIEFS* back to topmRNA from alignment at scaffold_66:49405..51672+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10994 ID=mRNA_10994|Name=jgi.p|Nanoce1779_2|612654|organism=Nannochloropsis oceanica|type=mRNA|length=2268bp|location=Sequence derived from alignment at scaffold_66:49405..51672+ (Nannochloropsis oceanica) CAGGCATTATTCGCCGCAGCAGCAGTACAGCAGCAACAGCAGTACAATAG
ATAGTCCATGGCTTCTTGCTATGGTGGTGTGAAGGTAAAAAAATCCCTCC
CTCTTCCATCTCCCTCCCTCCTCCCCTAAACCCCATTATATATATATATA
TCACCACAAAAGGGAGGAGCGATCAAGAACGATGGACGAAAAGATGGGCA
TTTGCTTCCCTATTTACCCATACAAACCAGCCTTAAGAACGGGATGAAGG
TGGAAGTCGATTTCTATCGGGAGAAGTAAGTCAAAGTAAAGGGTTGGGTC
GACCAAGTGGGAAGGGACATTGGGGAGAAGGGTATTGCGGGCTTACATGG
ACTTCTGCTTCTGGTTATACAACGCAGTGAATATCATGTAGGCTGGGCAC
TTTTGAACAAGGAGCTTGAGGAGGTAAGCCTCTTAAGGATAGGGGAGGGA
AAGAGGGAGAGAGGCAGTGCGGAGGGATCGTTCCATGCGCTATGTGGTAT
GCTTATACGTGCGCGCTGGAGACAATTCACAGTCCTCCCTCCATTTGTAT
TCCCTTGAATTTAAAGGGAAGGTCCTGGCCATTTTGGGGGTACCATGTCC
TTTGAGGAGTTCAGGGCCTACTTCCTTTCGCATAACGCCTTCGTCGTGCG
TGCCGTCAAGGGTGAGGAGGGAGGGAGAAGGGGAAGAAGGTAGGAATTCA
GGAATGCATAAGGACATCATGAGGCTTAAGTCTTGTATGATATCCACGTA
ACATATATCAGGTGGCGGAGAAGCATGCGTCGGTGCTGAAAGTAATGGAA
AAGAAGGAGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGCACCTATTAC
ATCAAACCGAACTTCCCGGATCGCTGCGCCCACATATGTAATGGCGGACT
AATTACCGAGGAAAGGGTATGTCACATCCTCTCCCTTATTCTGATGCCTC
CTTCGAGTATCTGTCCTTCACTCACTCAGACTCACCTTCTGTCCCTCGCT
TGTAGATGCGGGGTCACGGCGTGGGCACCGTTATGGCTCTCTCCTTCCTG
CGCATTGCAAAGGACCTTGGCTATAAGGCTTCGTATTTTAATCTCGTTTT
TGGTAGGCAGTTAGGGGATATATGGAGAGAGTGAAAGAAGGCAAGAGGGA
GGATGAAAACACTCATTGACTCCTCCGTCTTCCCTTCTGCCTTCCTCTCA
GCGACGAATACGGTATCAATCGCGCTGTGGGAGAAAACCGGCTTTCGGCG
TCTTGCCACCATTCCGGCGGCAGCTCGGCTAAAAGGGGAGGAGAGTCTGG
TGGATGCCTACATGTACCACTACGATCTGACAACGTACACGTGAGAAAGG
AAGAAAGGAAGGGAGCTCTATCTGGGTGTTCTCGATACATCGATATTTTT
ACGTATTTTGATTTATTCTTTCTCCTCCATTTAAACAGGGAGCTTGGGCC
TCTGTCGCTGGAAGACGCCGCTGTGGAATCGCGGAGGGCCATCGAATTCA
GCTAAGCTTGAATAAGTGAGACGTGACTGAGTTAGCGTGTCACGTGATCC
TGCCACGTGGTGGCGCTTCATCGTATTATCTGGGTGAATGTATCGTTATC
ACAAGGTCTTAAGACTTGCTCACGCCTCTGCGTTTTTGTGTTAACGTGAG
GGATGATGAACCAATGAATGGATGCATGAGACTGTCGGGGCAAGTCTCGC
TCACAAACTTGATGTGCGATAGAGTTGTGGTACGCGACAAAAACCATCAT
GCGGCCGACTCAGACGGGTAACTGTCTTAAGCCAATCCGCACACAGCTCA
AGGACCATCGGCGCCTTGGTATCTCCCTCTCAGGTAACGATCACTCACCT
GTGGGATAGACACTCAAAAATAAAACAATAACATCATTTCCTTGAAAACC
AAGCCATGCTAGGGCTTCATTTAATCGCTATAATAATAAAGGGTTCTAGA
CACACCCAAGGCATCGTCGGATCTCCGGATCCGGGGCCAGTATAGTGGCA
TAAGGGTTGACTGCCCCGCACTTCACCTGCATGCCTTTAAATGCGACTGT
GCATATGTGATGTGATGGCCTTGCTGAGAGCCCTTTGCGAACATTACGAG
CTCAAAATCAAAAATTACCCTTATCTCTGCAGCTGCCTCTCTTGAGACCG
CACTTTTCCTCTTTCTCCTTGAGTCCCTCACCGCCTTGGCCCCTCTATAA
AAACTATAAAACATTGAATTAAAAAAGGGAAAAGCGAAGAATGAAGTGTG
CTGGATGTAACCAATCTT back to topCoding sequence (CDS) from alignment at scaffold_66:49405..51672+ >mRNA_10994 ID=mRNA_10994|Name=jgi.p|Nanoce1779_2|612654|organism=Nannochloropsis oceanica|type=CDS|length=6426bp|location=Sequence derived from alignment at scaffold_66:49405..51672+ (Nannochloropsis oceanica) ATGGCTTCTTGCTATGGTGGTGTGAAGGGAGGAGCGATCAAGAACGATGG ACGAAAAGATGGGCATTTGCTTCCCTATTTACCCATACAAACCAGCCTTA AGAACGGGATGAAGGTGGAAGTCGATTTCTATCGGGAGAATGAATATCAT GTAGGCTGGGCACTTTTGAACAAGGAGCTTGAGGAGGGAAGGTCCTGGCC ATTTTGGGGGGCCTACTTCCTTTCGCATAACGCCTTCGTCGTGCGTGCCG TCAAGGGTGGCGGAGAAGCATGCGTCGGTGCTGAAAGTAATGGAAAAGAA GGAGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGCACCTATTACATCAA ACCGAACTTCCCGGATCGCTGCGCCCACATATGTAATGGCGGACTAATTA CCGAGGAAAGGATGCGGGGTCACGGCGTGGGCACCGTTATGGCTCTCTCC TTCCTGCGCATTGCAAAGGACCTTGGCTATAAGGCTTCGTATTTTAATCT CGTTTTTGCGACGAATACGGTATCAATCGCGCTGTGGGAGAAAACCGGCT TTCGGCGTCTTGCCACCATTCCGGCGGCAGCTCGGCTAAAAGGGGAGGAG AGTCTGGTGGATGCCTACATGTACCACTACGATCTGACAACGTACACGGA GCTTGGGCCTCTGTCGCTGGAAGACGCCGCTGTGGAATCGCGGAGGGCCA TCGAATTCAGCTAAATGGCTTCTTGCTATGGTGGTGTGAAGGGAGGAGCG ATCAAGAACGATGGACGAAAAGATGGGCATTTGCTTCCCTATTTACCCAT ACAAACCAGCCTTAAGAACGGGATGAAGGTGGAAGTCGATTTCTATCGGG AGAATGAATATCATGTAGGCTGGGCACTTTTGAACAAGGAGCTTGAGGAG GGAAGGTCCTGGCCATTTTGGGGGGCCTACTTCCTTTCGCATAACGCCTT CGTCGTGCGTGCCGTCAAGGGTGGCGGAGAAGCATGCGTCGGTGCTGAAA GTAATGGAAAAGAAGGAGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGC ACCTATTACATCAAACCGAACTTCCCGGATCGCTGCGCCCACATATGTAA TGGCGGACTAATTACCGAGGAAAGGATGCGGGGTCACGGCGTGGGCACCG TTATGGCTCTCTCCTTCCTGCGCATTGCAAAGGACCTTGGCTATAAGGCT TCGTATTTTAATCTCGTTTTTGCGACGAATACGGTATCAATCGCGCTGTG GGAGAAAACCGGCTTTCGGCGTCTTGCCACCATTCCGGCGGCAGCTCGGC TAAAAGGGGAGGAGAGTCTGGTGGATGCCTACATGTACCACTACGATCTG ACAACGTACACGGAGCTTGGGCCTCTGTCGCTGGAAGACGCCGCTGTGGA ATCGCGGAGGGCCATCGAATTCAGCTAAATGGCTTCTTGCTATGGTGGTG TGAAGGGAGGAGCGATCAAGAACGATGGACGAAAAGATGGGCATTTGCTT CCCTATTTACCCATACAAACCAGCCTTAAGAACGGGATGAAGGTGGAAGT CGATTTCTATCGGGAGAATGAATATCATGTAGGCTGGGCACTTTTGAACA AGGAGCTTGAGGAGGGAAGGTCCTGGCCATTTTGGGGGGCCTACTTCCTT TCGCATAACGCCTTCGTCGTGCGTGCCGTCAAGGGTGGCGGAGAAGCATG CGTCGGTGCTGAAAGTAATGGAAAAGAAGGAGTTGAAGGAGATGAAGGTG CTTCAGTCCTGGGCACCTATTACATCAAACCGAACTTCCCGGATCGCTGC GCCCACATATGTAATGGCGGACTAATTACCGAGGAAAGGATGCGGGGTCA CGGCGTGGGCACCGTTATGGCTCTCTCCTTCCTGCGCATTGCAAAGGACC TTGGCTATAAGGCTTCGTATTTTAATCTCGTTTTTGCGACGAATACGGTA TCAATCGCGCTGTGGGAGAAAACCGGCTTTCGGCGTCTTGCCACCATTCC GGCGGCAGCTCGGCTAAAAGGGGAGGAGAGTCTGGTGGATGCCTACATGT ACCACTACGATCTGACAACGTACACGGAGCTTGGGCCTCTGTCGCTGGAA GACGCCGCTGTGGAATCGCGGAGGGCCATCGAATTCAGCTAAATGGCTTC TTGCTATGGTGGTGTGAAGGGAGGAGCGATCAAGAACGATGGACGAAAAG ATGGGCATTTGCTTCCCTATTTACCCATACAAACCAGCCTTAAGAACGGG ATGAAGGTGGAAGTCGATTTCTATCGGGAGAATGAATATCATGTAGGCTG GGCACTTTTGAACAAGGAGCTTGAGGAGGGAAGGTCCTGGCCATTTTGGG GGGCCTACTTCCTTTCGCATAACGCCTTCGTCGTGCGTGCCGTCAAGGGT GGCGGAGAAGCATGCGTCGGTGCTGAAAGTAATGGAAAAGAAGGAGTTGA AGGAGATGAAGGTGCTTCAGTCCTGGGCACCTATTACATCAAACCGAACT TCCCGGATCGCTGCGCCCACATATGTAATGGCGGACTAATTACCGAGGAA AGGATGCGGGGTCACGGCGTGGGCACCGTTATGGCTCTCTCCTTCCTGCG CATTGCAAAGGACCTTGGCTATAAGGCTTCGTATTTTAATCTCGTTTTTG CGACGAATACGGTATCAATCGCGCTGTGGGAGAAAACCGGCTTTCGGCGT CTTGCCACCATTCCGGCGGCAGCTCGGCTAAAAGGGGAGGAGAGTCTGGT GGATGCCTACATGTACCACTACGATCTGACAACGTACACGGAGCTTGGGC CTCTGTCGCTGGAAGACGCCGCTGTGGAATCGCGGAGGGCCATCGAATTC AGCTAAATGGCTTCTTGCTATGGTGGTGTGAAGGGAGGAGCGATCAAGAA CGATGGACGAAAAGATGGGCATTTGCTTCCCTATTTACCCATACAAACCA GCCTTAAGAACGGGATGAAGGTGGAAGTCGATTTCTATCGGGAGAATGAA TATCATGTAGGCTGGGCACTTTTGAACAAGGAGCTTGAGGAGGGAAGGTC CTGGCCATTTTGGGGGGCCTACTTCCTTTCGCATAACGCCTTCGTCGTGC GTGCCGTCAAGGGTGGCGGAGAAGCATGCGTCGGTGCTGAAAGTAATGGA AAAGAAGGAGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGCACCTATTA CATCAAACCGAACTTCCCGGATCGCTGCGCCCACATATGTAATGGCGGAC TAATTACCGAGGAAAGGATGCGGGGTCACGGCGTGGGCACCGTTATGGCT CTCTCCTTCCTGCGCATTGCAAAGGACCTTGGCTATAAGGCTTCGTATTT TAATCTCGTTTTTGCGACGAATACGGTATCAATCGCGCTGTGGGAGAAAA CCGGCTTTCGGCGTCTTGCCACCATTCCGGCGGCAGCTCGGCTAAAAGGG GAGGAGAGTCTGGTGGATGCCTACATGTACCACTACGATCTGACAACGTA CACGGAGCTTGGGCCTCTGTCGCTGGAAGACGCCGCTGTGGAATCGCGGA GGGCCATCGAATTCAGCTAAATGGCTTCTTGCTATGGTGGTGTGAAGGGA GGAGCGATCAAGAACGATGGACGAAAAGATGGGCATTTGCTTCCCTATTT ACCCATACAAACCAGCCTTAAGAACGGGATGAAGGTGGAAGTCGATTTCT ATCGGGAGAATGAATATCATGTAGGCTGGGCACTTTTGAACAAGGAGCTT GAGGAGGGAAGGTCCTGGCCATTTTGGGGGGCCTACTTCCTTTCGCATAA CGCCTTCGTCGTGCGTGCCGTCAAGGGTGGCGGAGAAGCATGCGTCGGTG CTGAAAGTAATGGAAAAGAAGGAGTTGAAGGAGATGAAGGTGCTTCAGTC CTGGGCACCTATTACATCAAACCGAACTTCCCGGATCGCTGCGCCCACAT ATGTAATGGCGGACTAATTACCGAGGAAAGGATGCGGGGTCACGGCGTGG GCACCGTTATGGCTCTCTCCTTCCTGCGCATTGCAAAGGACCTTGGCTAT AAGGCTTCGTATTTTAATCTCGTTTTTGCGACGAATACGGTATCAATCGC GCTGTGGGAGAAAACCGGCTTTCGGCGTCTTGCCACCATTCCGGCGGCAG CTCGGCTAAAAGGGGAGGAGAGTCTGGTGGATGCCTACATGTACCACTAC GATCTGACAACGTACACGGAGCTTGGGCCTCTGTCGCTGGAAGACGCCGC TGTGGAATCGCGGAGGGCCATCGAATTCAGCTAAATGGCTTCTTGCTATG GTGGTGTGAAGGGAGGAGCGATCAAGAACGATGGACGAAAAGATGGGCAT TTGCTTCCCTATTTACCCATACAAACCAGCCTTAAGAACGGGATGAAGGT GGAAGTCGATTTCTATCGGGAGAATGAATATCATGTAGGCTGGGCACTTT TGAACAAGGAGCTTGAGGAGGGAAGGTCCTGGCCATTTTGGGGGGCCTAC TTCCTTTCGCATAACGCCTTCGTCGTGCGTGCCGTCAAGGGTGGCGGAGA AGCATGCGTCGGTGCTGAAAGTAATGGAAAAGAAGGAGTTGAAGGAGATG AAGGTGCTTCAGTCCTGGGCACCTATTACATCAAACCGAACTTCCCGGAT CGCTGCGCCCACATATGTAATGGCGGACTAATTACCGAGGAAAGGATGCG GGGTCACGGCGTGGGCACCGTTATGGCTCTCTCCTTCCTGCGCATTGCAA AGGACCTTGGCTATAAGGCTTCGTATTTTAATCTCGTTTTTGCGACGAAT ACGGTATCAATCGCGCTGTGGGAGAAAACCGGCTTTCGGCGTCTTGCCAC CATTCCGGCGGCAGCTCGGCTAAAAGGGGAGGAGAGTCTGGTGGATGCCT ACATGTACCACTACGATCTGACAACGTACACGGAGCTTGGGCCTCTGTCG CTGGAAGACGCCGCTGTGGAATCGCGGAGGGCCATCGAATTCAGCTAAAT GGCTTCTTGCTATGGTGGTGTGAAGGGAGGAGCGATCAAGAACGATGGAC GAAAAGATGGGCATTTGCTTCCCTATTTACCCATACAAACCAGCCTTAAG AACGGGATGAAGGTGGAAGTCGATTTCTATCGGGAGAATGAATATCATGT AGGCTGGGCACTTTTGAACAAGGAGCTTGAGGAGGGAAGGTCCTGGCCAT TTTGGGGGGCCTACTTCCTTTCGCATAACGCCTTCGTCGTGCGTGCCGTC AAGGGTGGCGGAGAAGCATGCGTCGGTGCTGAAAGTAATGGAAAAGAAGG AGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGCACCTATTACATCAAAC CGAACTTCCCGGATCGCTGCGCCCACATATGTAATGGCGGACTAATTACC GAGGAAAGGATGCGGGGTCACGGCGTGGGCACCGTTATGGCTCTCTCCTT CCTGCGCATTGCAAAGGACCTTGGCTATAAGGCTTCGTATTTTAATCTCG TTTTTGCGACGAATACGGTATCAATCGCGCTGTGGGAGAAAACCGGCTTT CGGCGTCTTGCCACCATTCCGGCGGCAGCTCGGCTAAAAGGGGAGGAGAG TCTGGTGGATGCCTACATGTACCACTACGATCTGACAACGTACACGGAGC TTGGGCCTCTGTCGCTGGAAGACGCCGCTGTGGAATCGCGGAGGGCCATC GAATTCAGCTAAATGGCTTCTTGCTATGGTGGTGTGAAGGGAGGAGCGAT CAAGAACGATGGACGAAAAGATGGGCATTTGCTTCCCTATTTACCCATAC AAACCAGCCTTAAGAACGGGATGAAGGTGGAAGTCGATTTCTATCGGGAG AATGAATATCATGTAGGCTGGGCACTTTTGAACAAGGAGCTTGAGGAGGG AAGGTCCTGGCCATTTTGGGGGGCCTACTTCCTTTCGCATAACGCCTTCG TCGTGCGTGCCGTCAAGGGTGGCGGAGAAGCATGCGTCGGTGCTGAAAGT AATGGAAAAGAAGGAGTTGAAGGAGATGAAGGTGCTTCAGTCCTGGGCAC CTATTACATCAAACCGAACTTCCCGGATCGCTGCGCCCACATATGTAATG GCGGACTAATTACCGAGGAAAGGATGCGGGGTCACGGCGTGGGCACCGTT ATGGCTCTCTCCTTCCTGCGCATTGCAAAGGACCTTGGCTATAAGGCTTC GTATTTTAATCTCGTTTTTGCGACGAATACGGTATCAATCGCGCTGTGGG AGAAAACCGGCTTTCGGCGTCTTGCCACCATTCCGGCGGCAGCTCGGCTA AAAGGGGAGGAGAGTCTGGTGGATGCCTACATGTACCACTACGATCTGAC AACGTACACGGAGCTTGGGCCTCTGTCGCTGGAAGACGCCGCTGTGGAAT CGCGGAGGGCCATCGAATTCAGCTAA back to top
|