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Properties
| Property Name | Value |
|---|
| TranscriptId | 675143 |
| Track | FilteredModels2 |
| ProteinId | 675057 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_71 | supercontig | scaffold_71:20741..22100 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10901 ID=mRNA_10901|Name=jgi.p|Nanoce1779_2|675057|organism=Nannochloropsis oceanica|type=mRNA|length=823bp
CAGGGATGACGACCTTACAGAGAGAGGAACGAAATGGTCTGAGGGACGAA
GAGGAGGCTGGCGGGCCGATGTATCTGTTGCCACCTGATTCCGAGTGCAA
TGACGCCGAGGACGACAAGCTGTTATCACCCGAAAATCTCCTGCCTGCCG
TGTTTGTGTCGGTCGGTCCCACTAGTAGCAACCCATTTGAGCAGGCCTCC
TCCCTCTCTCCCTCCCCGAAAAGCCCACCGCGGGGTCGATGGAAGGACGG
CTTTTGCGACTGGCACAAAGATTGCTTACATTCCTGCCTGCTAGGATCCC
TCCTGAACTGTGTCCTTCTTGGCCAAGTGGCTCAGCGGATGAAATTCTGC
ATGAGATTCAAAGAGGTGACGCTTGTCAGCTTAGGCTTGTGGACTCTCTC
TTGCGTGCTCTACGTAGCTCTGCCCAAGAATGTCGGTCCCGGTGGCCTGG
CGAATGTGGCTTATTCCCTCTTCTTCCTCCTCGTCCTATGCCAACTCCGC
GGTATGGTCCGATCACGGGATGCGATTCCGGGTGACCGATTCTGGGATTG
CTGCGCCAGTCTCTGGTGCTCCTGCTGCACGCTCACGCAGATGGCTCGCC
ATGTCTTCCATTACCAAGACAATCACGCAGAGTGCTCATTAAGGCCAGGT
AGTGACTCCTTTGTGACCGTGATCTAGTTCAGTAGCGGAGATGTGTCACA
TGCCCCTAATAAGACAAATAGAGAGGCGAACGTAATCGTCGTCATTGAAC
TGCAGTAAAGGAAAAAAATTCCTGGAAGAATATATCAAGCTAGGGGTGTC
GGATCCTATACTTCATTCACTTT back to topprotein sequence of jgi.p|Nanoce1779_2|675057 >mRNA_10901-protein ID=mRNA_10901-protein|Name=jgi.p|Nanoce1779_2|675057|organism=Nannochloropsis oceanica|type=polypeptide|length=224bp
MTTLQREERNGLRDEEEAGGPMYLLPPDSECNDAEDDKLLSPENLLPAVF
VSVGPTSSNPFEQASSLSPSPKSPPRGRWKDGFCDWHKDCLHSCLLGSLL
NCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYVALPKNVGPGGLAN
VAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHV
FHYQDNHAECSLRPGSDSFVTVI* back to topmRNA from alignment at scaffold_71:20741..22100- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10901 ID=mRNA_10901|Name=jgi.p|Nanoce1779_2|675057|organism=Nannochloropsis oceanica|type=mRNA|length=1360bp|location=Sequence derived from alignment at scaffold_71:20741..22100- (Nannochloropsis oceanica)
CAGGGATGACGACCTTACAGAGAGAGGAACGAAATGGTCTGAGGGACGAA
GAGGAGGCTGGCGGGCCGATGTATCTGTTGCCACCTGATTCCGAGTGCAA
TGACGCCGAGGACGACAAGCTGGTAAGTGCTCAATTTGCATACACAAACC
CCAAATTCCTCGCTTACGAACATCACCGACCCATCCATTTAAACATTAAG
TTATCACCCGAAAATCTCCTGCCTGCCGTGTTTGTGTCGGTCGGTCCCAC
TAGTAGCAACCCATTTGAGCAGGCCTCCTCCCTCTCTCCCTCCCCGAAAA
GCCCACCGCGGGGTCGATGGAAGGACGGCTTTTGCGACTGGCACAAAGAT
TGCTTACATTCCTGTACGTATAAGAATTTTTTTTACCATTTGTATGTCTT
ACACGTACGTCAAACTTCGCACTATTATCAATTTACAATTCTCTGTGACT
TCCCTTATGACACAGGCCTGCTAGGATCCCTCCTGAACTGTGTCCTTCTT
GGTGAGACCTCTATCGGCCCAGCGCTCATCTCACTCTCTCTTCAATCAGT
CGACTCACTGATCGAACCCTTATCCTAGGCCAAGTGGCTCAGCGGATGAA
ATTCTGCATGAGATTCAAAGAGGTGACGCTTGTCAGCTTAGGCTTGTGGA
CTCTCTCTTGCGTGCTCTACGTAGCTCTGCCCAAGTAAGTCCAATAATGG
GGGGGAAATAGAGATGGATAAAATTAGAAATAAATGACGACATCCAAACC
TTTATAATGCGCTGAATCCCGTCGGTATGCTAGGAATGTCGGTCCCGGTG
GCCTGGCGAATGTGGCTTATTCCCTCTTCTTCCTCCTCGTCCTATGCCAA
CTCCGCGGTATGGTCCGATCACGGGATGCGATTCCGGTGTGTATAGAAAC
AATGAACCGTCACCTTTCTTTCCTTCCTTGGACCTATGGACCTCACTCGT
GCCGCGTATATTTATGTAGGGTGACCGATTCTGGGATTGCTGCGCCAGTC
TCTGGTGCTCCTGCTGCACGCTCACGCAGATGGCTCGCCATGTCTTCCAT
TACCAAGGTAATTGAGGAAGTATTCCGTTCGTCAAGATTGAAGGGATAAA
TGGCCAAATGGTCAAACAATTGAAAAAACTAAATTCACTCCTTCCTCCAA
CCCAGACAATCACGCAGAGTGCTCATTAAGGCCAGGTAGTGACTCCTTTG
TGACCGTGATCTAGTTCAGTAGCGGAGATGTGTCACATGCCCCTAATAAG
ACAAATAGAGAGGCGAACGTAATCGTCGTCATTGAACTGCAGTAAAGGAA
AAAAATTCCTGGAAGAATATATCAAGCTAGGGGTGTCGGATCCTATACTT
CATTCACTTT back to topCoding sequence (CDS) from alignment at scaffold_71:20741..22100- >mRNA_10901 ID=mRNA_10901|Name=jgi.p|Nanoce1779_2|675057|organism=Nannochloropsis oceanica|type=CDS|length=4704bp|location=Sequence derived from alignment at scaffold_71:20741..22100- (Nannochloropsis oceanica)
ACAATCACGCAGAGTGCTCATTAAGGCCAGGTAGTGACTCCTTTGTGACC
GTGATCTAGGGTGACCGATTCTGGGATTGCTGCGCCAGTCTCTGGTGCTC
CTGCTGCACGCTCACGCAGATGGCTCGCCATGTCTTCCATTACCAAGGAA
TGTCGGTCCCGGTGGCCTGGCGAATGTGGCTTATTCCCTCTTCTTCCTCC
TCGTCCTATGCCAACTCCGCGGTATGGTCCGATCACGGGATGCGATTCCG
GCCAAGTGGCTCAGCGGATGAAATTCTGCATGAGATTCAAAGAGGTGACG
CTTGTCAGCTTAGGCTTGTGGACTCTCTCTTGCGTGCTCTACGTAGCTCT
GCCCAAGCCTGCTAGGATCCCTCCTGAACTGTGTCCTTCTTGTTATCACC
CGAAAATCTCCTGCCTGCCGTGTTTGTGTCGGTCGGTCCCACTAGTAGCA
ACCCATTTGAGCAGGCCTCCTCCCTCTCTCCCTCCCCGAAAAGCCCACCG
CGGGGTCGATGGAAGGACGGCTTTTGCGACTGGCACAAAGATTGCTTACA
TTCCTATGACGACCTTACAGAGAGAGGAACGAAATGGTCTGAGGGACGAA
GAGGAGGCTGGCGGGCCGATGTATCTGTTGCCACCTGATTCCGAGTGCAA
TGACGCCGAGGACGACAAGCTGACAATCACGCAGAGTGCTCATTAAGGCC
AGGTAGTGACTCCTTTGTGACCGTGATCTAGGGTGACCGATTCTGGGATT
GCTGCGCCAGTCTCTGGTGCTCCTGCTGCACGCTCACGCAGATGGCTCGC
CATGTCTTCCATTACCAAGGAATGTCGGTCCCGGTGGCCTGGCGAATGTG
GCTTATTCCCTCTTCTTCCTCCTCGTCCTATGCCAACTCCGCGGTATGGT
CCGATCACGGGATGCGATTCCGGCCAAGTGGCTCAGCGGATGAAATTCTG
CATGAGATTCAAAGAGGTGACGCTTGTCAGCTTAGGCTTGTGGACTCTCT
CTTGCGTGCTCTACGTAGCTCTGCCCAAGCCTGCTAGGATCCCTCCTGAA
CTGTGTCCTTCTTGTTATCACCCGAAAATCTCCTGCCTGCCGTGTTTGTG
TCGGTCGGTCCCACTAGTAGCAACCCATTTGAGCAGGCCTCCTCCCTCTC
TCCCTCCCCGAAAAGCCCACCGCGGGGTCGATGGAAGGACGGCTTTTGCG
ACTGGCACAAAGATTGCTTACATTCCTATGACGACCTTACAGAGAGAGGA
ACGAAATGGTCTGAGGGACGAAGAGGAGGCTGGCGGGCCGATGTATCTGT
TGCCACCTGATTCCGAGTGCAATGACGCCGAGGACGACAAGCTGACAATC
ACGCAGAGTGCTCATTAAGGCCAGGTAGTGACTCCTTTGTGACCGTGATC
TAGGGTGACCGATTCTGGGATTGCTGCGCCAGTCTCTGGTGCTCCTGCTG
CACGCTCACGCAGATGGCTCGCCATGTCTTCCATTACCAAGGAATGTCGG
TCCCGGTGGCCTGGCGAATGTGGCTTATTCCCTCTTCTTCCTCCTCGTCC
TATGCCAACTCCGCGGTATGGTCCGATCACGGGATGCGATTCCGGCCAAG
TGGCTCAGCGGATGAAATTCTGCATGAGATTCAAAGAGGTGACGCTTGTC
AGCTTAGGCTTGTGGACTCTCTCTTGCGTGCTCTACGTAGCTCTGCCCAA
GCCTGCTAGGATCCCTCCTGAACTGTGTCCTTCTTGTTATCACCCGAAAA
TCTCCTGCCTGCCGTGTTTGTGTCGGTCGGTCCCACTAGTAGCAACCCAT
TTGAGCAGGCCTCCTCCCTCTCTCCCTCCCCGAAAAGCCCACCGCGGGGT
CGATGGAAGGACGGCTTTTGCGACTGGCACAAAGATTGCTTACATTCCTA
TGACGACCTTACAGAGAGAGGAACGAAATGGTCTGAGGGACGAAGAGGAG
GCTGGCGGGCCGATGTATCTGTTGCCACCTGATTCCGAGTGCAATGACGC
CGAGGACGACAAGCTGACAATCACGCAGAGTGCTCATTAAGGCCAGGTAG
TGACTCCTTTGTGACCGTGATCTAGGGTGACCGATTCTGGGATTGCTGCG
CCAGTCTCTGGTGCTCCTGCTGCACGCTCACGCAGATGGCTCGCCATGTC
TTCCATTACCAAGGAATGTCGGTCCCGGTGGCCTGGCGAATGTGGCTTAT
TCCCTCTTCTTCCTCCTCGTCCTATGCCAACTCCGCGGTATGGTCCGATC
ACGGGATGCGATTCCGGCCAAGTGGCTCAGCGGATGAAATTCTGCATGAG
ATTCAAAGAGGTGACGCTTGTCAGCTTAGGCTTGTGGACTCTCTCTTGCG
TGCTCTACGTAGCTCTGCCCAAGCCTGCTAGGATCCCTCCTGAACTGTGT
CCTTCTTGTTATCACCCGAAAATCTCCTGCCTGCCGTGTTTGTGTCGGTC
GGTCCCACTAGTAGCAACCCATTTGAGCAGGCCTCCTCCCTCTCTCCCTC
CCCGAAAAGCCCACCGCGGGGTCGATGGAAGGACGGCTTTTGCGACTGGC
ACAAAGATTGCTTACATTCCTATGACGACCTTACAGAGAGAGGAACGAAA
TGGTCTGAGGGACGAAGAGGAGGCTGGCGGGCCGATGTATCTGTTGCCAC
CTGATTCCGAGTGCAATGACGCCGAGGACGACAAGCTGACAATCACGCAG
AGTGCTCATTAAGGCCAGGTAGTGACTCCTTTGTGACCGTGATCTAGGGT
GACCGATTCTGGGATTGCTGCGCCAGTCTCTGGTGCTCCTGCTGCACGCT
CACGCAGATGGCTCGCCATGTCTTCCATTACCAAGGAATGTCGGTCCCGG
TGGCCTGGCGAATGTGGCTTATTCCCTCTTCTTCCTCCTCGTCCTATGCC
AACTCCGCGGTATGGTCCGATCACGGGATGCGATTCCGGCCAAGTGGCTC
AGCGGATGAAATTCTGCATGAGATTCAAAGAGGTGACGCTTGTCAGCTTA
GGCTTGTGGACTCTCTCTTGCGTGCTCTACGTAGCTCTGCCCAAGCCTGC
TAGGATCCCTCCTGAACTGTGTCCTTCTTGTTATCACCCGAAAATCTCCT
GCCTGCCGTGTTTGTGTCGGTCGGTCCCACTAGTAGCAACCCATTTGAGC
AGGCCTCCTCCCTCTCTCCCTCCCCGAAAAGCCCACCGCGGGGTCGATGG
AAGGACGGCTTTTGCGACTGGCACAAAGATTGCTTACATTCCTATGACGA
CCTTACAGAGAGAGGAACGAAATGGTCTGAGGGACGAAGAGGAGGCTGGC
GGGCCGATGTATCTGTTGCCACCTGATTCCGAGTGCAATGACGCCGAGGA
CGACAAGCTGACAATCACGCAGAGTGCTCATTAAGGCCAGGTAGTGACTC
CTTTGTGACCGTGATCTAGGGTGACCGATTCTGGGATTGCTGCGCCAGTC
TCTGGTGCTCCTGCTGCACGCTCACGCAGATGGCTCGCCATGTCTTCCAT
TACCAAGGAATGTCGGTCCCGGTGGCCTGGCGAATGTGGCTTATTCCCTC
TTCTTCCTCCTCGTCCTATGCCAACTCCGCGGTATGGTCCGATCACGGGA
TGCGATTCCGGCCAAGTGGCTCAGCGGATGAAATTCTGCATGAGATTCAA
AGAGGTGACGCTTGTCAGCTTAGGCTTGTGGACTCTCTCTTGCGTGCTCT
ACGTAGCTCTGCCCAAGCCTGCTAGGATCCCTCCTGAACTGTGTCCTTCT
TGTTATCACCCGAAAATCTCCTGCCTGCCGTGTTTGTGTCGGTCGGTCCC
ACTAGTAGCAACCCATTTGAGCAGGCCTCCTCCCTCTCTCCCTCCCCGAA
AAGCCCACCGCGGGGTCGATGGAAGGACGGCTTTTGCGACTGGCACAAAG
ATTGCTTACATTCCTATGACGACCTTACAGAGAGAGGAACGAAATGGTCT
GAGGGACGAAGAGGAGGCTGGCGGGCCGATGTATCTGTTGCCACCTGATT
CCGAGTGCAATGACGCCGAGGACGACAAGCTGACAATCACGCAGAGTGCT
CATTAAGGCCAGGTAGTGACTCCTTTGTGACCGTGATCTAGGGTGACCGA
TTCTGGGATTGCTGCGCCAGTCTCTGGTGCTCCTGCTGCACGCTCACGCA
GATGGCTCGCCATGTCTTCCATTACCAAGGAATGTCGGTCCCGGTGGCCT
GGCGAATGTGGCTTATTCCCTCTTCTTCCTCCTCGTCCTATGCCAACTCC
GCGGTATGGTCCGATCACGGGATGCGATTCCGGCCAAGTGGCTCAGCGGA
TGAAATTCTGCATGAGATTCAAAGAGGTGACGCTTGTCAGCTTAGGCTTG
TGGACTCTCTCTTGCGTGCTCTACGTAGCTCTGCCCAAGCCTGCTAGGAT
CCCTCCTGAACTGTGTCCTTCTTGTTATCACCCGAAAATCTCCTGCCTGC
CGTGTTTGTGTCGGTCGGTCCCACTAGTAGCAACCCATTTGAGCAGGCCT
CCTCCCTCTCTCCCTCCCCGAAAAGCCCACCGCGGGGTCGATGGAAGGAC
GGCTTTTGCGACTGGCACAAAGATTGCTTACATTCCTATGACGACCTTAC
AGAGAGAGGAACGAAATGGTCTGAGGGACGAAGAGGAGGCTGGCGGGCCG
ATGTATCTGTTGCCACCTGATTCCGAGTGCAATGACGCCGAGGACGACAA
GCTG back to top
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