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Properties
| Property Name | Value |
|---|
| TranscriptId | 613059 |
| Track | FilteredModels2 |
| ProteinId | 612973 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_69 | supercontig | scaffold_69:53525..56623 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10819 ID=mRNA_10819|Name=jgi.p|Nanoce1779_2|612973|organism=Nannochloropsis oceanica|type=mRNA|length=3000bp
GAGTCCCCGCAGCGGGCATTCCTTAGCTCCTTTATCTTCTCGCACTCGTC
CGGAGTCAGGCTGATGCTGCCGCACATGGGCCCTTCCGTTTCGCCTTGGT
GCAGCCCCCACACAGGACAGGTATCGCTGAGCCCCTCCATGGCTAGGGTT
AGGGTGAGCACCAAAGCCTTTGAAAAGTACCAATTTCTCTATTACGATGG
ACTGGCGCCCCGCACAACGGGGTAAAACGCATCGCACTGTTCTTGGAGAC
TTTTTGGCATGCACATTGGCCGCCTCCAACGTTTGGAACTCAGTGAGGGA
CGTCTGTTGTTACTGATTGAGCGAGCAGGACAACGTACTTAACATATATC
AGCACGACCACATGAGCCTTGAACTGTTTGATATCGTTTAGATTATCTAA
CGCAAGTGCCTCACTATGGTGCACCAACGGGTCATTTAATTGCAGGCACT
TATAGCCGCTCCCCTGCGTCGAGCTCTTGTTGGTCTTCCCTCACACAATG
ACGGGCGACAGCATGATTCTCACGACAGCACCTATGACGTTCCCCCTTCA
TTCAGACACTCACCCTCGCCACAAACACGATCCGCGCACACACAATTAAA
ATCTAGTCGCCTAGCTTGCCCTCCACGTGTGTAACAGCGAGCGTGCAGTC
TGGAAACCATGCATAGCCTCATCATTCAAGCTGCTCTTCTTCTATGCTGC
CTTCTGTATTCTGCCGCCTTCCTCTTGCCCTGTTCCTCGTCTTGTTCACT
CCTCTCCAGCTCGACGACGAGACTACACGCATCACCGTACAATTATCCCC
CTCCCCCGGGGTCTGGCAGGCGTAGAAGGGCTAGTAAATGGATTGATGCC
GAGCTGATGAAGCAAAAGGAGTTGGAGAAGCGCCAAGGCAAGCAACAGGG
GACTGCCACCGGCTCGGGGCCTGACCTGTTTCCCTCCCCAACAGGCAGAA
TCAGCAGCAACAAGGAGAAGGACAAAAAATTTCTTAGTCAGGCGCGACAG
CAGTTGCAAGGGGAAGTGGACACGTTGATCGAGCGGCTGACTGGCATCTA
CAAGCAGGTCAAGGACCAAAGCAACAAGATCACAACCTTTGGCGTGGCCG
AGTTCAACCCCAAGGTGGCCACGTTAACGGACCAGATTGGAGTCGAGCTT
GAAAGCTTGCTAGGGCGCTTGAAGGGCTTGAAGGCAGCACTGAGGGACGG
AGAGGGGGAGGCCGGGGGGGAAGCAGCGGGAGGAACAGGGAAAGGGACAC
CAGATTTTTTGGTGACGCAGAGTTTTGCTTTGAAGGCTTTGAGCAAGGAC
TTGGAGGGGCTCCTTTTCTTGATCGAGGCCCGAGAACGGGAGGTGGACAT
CTTATTGCGATCGCTGGGCATGGAAGAGGGAGGAGAGGAGGACTGAGAGA
AGCTTTGTGGAGGAGAAGATGGACGGAGAGACAGAAGCAGGGTTTCCAGA
CCTCATAGCCTTTGTACATAGAGGCAAGTCTATGGGATCCTATGTATGGG
TATCTTATATGACGGGTGGCGGGGGAGAAACATACGGGGAAGAGTGATGG
GAGAGAGGGAGGGGCTGGGGTGTAGTGAATGCTTCTTGCTTTTTAGAGGC
GGGACATTGGAGCTGCAGTTGCTCTGCAACCTGACTGGGAATGGAGGGAA
GGAGTTGAACAAAGGGAGTGATGATCTAGGAGGAGACTTATCATCTCCTG
CGCTCGCTGATAACGTGTGTGGAACAAGCGTAGGGTGAGCGTTGTTTGGA
TGTACAGTGCACCACCACGACGGGGTTCCGGCCTGGATTACCTCTGAGAG
GAATGTCTTCAATATGTACATAGGATGGTGGGAGGTGGGCGCATAGGGAG
GAAGCGATATAGTTAAGAGGCTTCCATAGATATATTAAGAGCGGATGAGC
ACAAAAGATGAGTGGAAGGACGAAGAAGGGAAGGGAATAAAACGTAGACG
ATGAGATGGGTTTGCTCGACGTCTTCGGGTCTGCTTTGTTATTGCTCTTC
TTTGCCTCCCTCGCCCACTCCCCTCGTCCCCCTCCTCCTTCGAAAATGCG
TACGGCCTGAAGTCTCCCCGCGAATCTTGTAAATCGTTTGCAGAAGCTTG
AGAATTGCGACAGATCAAACTATCCGCATCGACTCCCTCCTCCTCCTGCC
CCGACTCTCACACCCGTTGCCTTCCCACCCTATTTCCTCTTTGTTGCCAT
AATATCCTCGATGAGCTTAATGGATATGCGCTACTGCTGTGAGGTCTGCC
ACGGGCTATATTCGCAAGACCACGTTGCTGGAATATGCACATGGCGACGT
GCCAATTTGTGAGTGGGAGTTGGGAGATACAGGCCGTACCATCATGTTTA
CCTGAGCACCAAACACATTTCTATGTGCACAGGAATCACCACGCAATTAT
AGTGACCCGGAATCTTATTAGTAGTCGCCTGCAAGAGGCTCACCGCTCTC
CTTTGTTCTTTGTGTTGCCATCTGCTGAAGAAGTAGCTCGGTCCTCGTCT
GTGGCTTTTAAACTGTGCTTTCCCCTCAACCATGCCGCACGCCGCCCTCC
CATAACTCTCTCTCTATCTTTCCTTCCCTTCTTGCCATTGCTCATGTGCA
AATTCACGGTAAATCGTGATTTAATGGATCGATTCTCTTCCTACCTCTCA
TCTTTCTTCCTTCTTCAGTTGTGCCACAGTGGCCTTGCAGAAGGGGAATC
TTCAAATCCTCATTTCATCCACCACTCAGCCCACTCCTTTCTTCCTTTTC
CCCGCAACCCTTAAAGGGAAGGCGACTCAGTCGAAAAACAACATGCAATA
TCTAATATACAGACTAAAACCTCCCTCTCCCTTCACCCTCCTCCCTCTCT
CCCTCCCGTACCCTCCCTCCCTCTCTCCGCAACACTTGCCCTAATACTTG
GGATCATTCCAGGGCGAGTCCTTGGCAAAACAGAATTGAGAGATGTTCAC
CAGAGTCCCTTGCTCCCACTGCCCCTTCAGCACATCCCCGCCCTCCTCCA back to topprotein sequence of jgi.p|Nanoce1779_2|612973 >mRNA_10819-protein ID=mRNA_10819-protein|Name=jgi.p|Nanoce1779_2|612973|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MHSLIIQAALLLCCLLYSAAFLLPCSSSCSLLSSSTTRLHASPYNYPPPP
GSGRRRRASKWIDAELMKQKELEKRQGKQQGTATGSGPDLFPSPTGRISS
NKEKDKKFLSQARQQLQGEVDTLIERLTGIYKQVKDQSNKITTFGVAEFN
PKVATLTDQIGVELESLLGRLKGLKAALRDGEGEAGGEAAGGTGKGTPDF
LVTQSFALKALSKDLEGLLFLIEAREREVDILLRSLGMEEGGEED* back to topmRNA from alignment at scaffold_69:53525..56623- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10819 ID=mRNA_10819|Name=jgi.p|Nanoce1779_2|612973|organism=Nannochloropsis oceanica|type=mRNA|length=3099bp|location=Sequence derived from alignment at scaffold_69:53525..56623- (Nannochloropsis oceanica)
GAGTCCCCGCAGCGGGCATTCCTTAGCTCCTTTATCTTCTCGCACTCGTC
CGGAGTCAGGCTGATGCTGCCGCACATGGGCCCTTCCGTTTCGCCTTGGT
GCAGCCCCCACACAGGACAGGTATCGCTGAGCCCCTCCATGGCTAGGGTT
AGGGTGAGCACCAAAGCCTTTGAAAAGTACCAATTTCTCTATTACGATGG
ACTGGCGCCCCGCACAACGGGGTAAAACGCATCGCACTGTTCTTGGAGAC
TTTTTGGCATGCACATTGGCCGCCTCCAACGTTGAAAAGCAACCAAACGT
GCTTCGCGTATGAACGATGCGAGCTATCTTGTGATAGAGAATTGCACAAG
ATAGCTCGCATCGTTCATACGCGAAGCACGTTTGGAACTCAGTGAGGGAC
GTCTGTTGTTACTGATTGAGCGAGCAGGACAACGTACTTAACATATATCA
GCACGACCACATGAGCCTTGAACTGTTTGATATCGTTTAGATTATCTAAC
GCAAGTGCCTCACTATGGTGCACCAACGGGTCATTTAATTGCAGGCACTT
ATAGCCGCTCCCCTGCGTCGAGCTCTTGTTGGTCTTCCCTCACACAATGA
CGGGCGACAGCATGATTCTCACGACAGCACCTATGACGTTCCCCCTTCAT
TCAGACACTCACCCTCGCCACAAACACGATCCGCGCACACACAATTAAAA
TCTAGTCGCCTAGCTTGCCCTCCACGTGTGTAACAGCGAGCGTGCAGTCT
GGAAACCATGCATAGCCTCATCATTCAAGCTGCTCTTCTTCTATGCTGCC
TTCTGTATTCTGCCGCCTTCCTCTTGCCCTGTTCCTCGTCTTGTTCACTC
CTCTCCAGCTCGACGACGAGACTACACGCATCACCGTACAATTATCCCCC
TCCCCCGGGGTCTGGCAGGCGTAGAAGGGCTAGTAAATGGATTGATGCCG
AGCTGATGAAGCAAAAGGAGTTGGAGAAGCGCCAAGGCAAGCAACAGGGG
ACTGCCACCGGCTCGGGGCCTGACCTGTTTCCCTCCCCAACAGGCAGAAT
CAGCAGCAACAAGGAGAAGGACAAAAAATTTCTTAGTCAGGCGCGACAGC
AGTTGCAAGGGGAAGTGGACACGTTGATCGAGCGGCTGACTGGCATCTAC
AAGCAGGTCAAGGACCAAAGCAACAAGATCACAACCTTTGGCGTGGCCGA
GTTCAACCCCAAGGTGGCCACGTTAACGGACCAGATTGGAGTCGAGCTTG
AAAGCTTGCTAGGGCGCTTGAAGGGCTTGAAGGCAGCACTGAGGGACGGA
GAGGGGGAGGCCGGGGGGGAAGCAGCGGGAGGAACAGGGAAAGGGACACC
AGATTTTTTGGTGACGCAGAGTTTTGCTTTGAAGGCTTTGAGCAAGGACT
TGGAGGGGCTCCTTTTCTTGATCGAGGCCCGAGAACGGGAGGTGGACATC
TTATTGCGATCGCTGGGCATGGAAGAGGGAGGAGAGGAGGACTGAGAGAA
GCTTTGTGGAGGAGAAGATGGACGGAGAGACAGAAGCAGGGTTTCCAGAC
CTCATAGCCTTTGTACATAGAGGCAAGTCTATGGGATCCTATGTATGGGT
ATCTTATATGACGGGTGGCGGGGGAGAAACATACGGGGAAGAGTGATGGG
AGAGAGGGAGGGGCTGGGGTGTAGTGAATGCTTCTTGCTTTTTAGAGGCG
GGACATTGGAGCTGCAGTTGCTCTGCAACCTGACTGGGAATGGAGGGAAG
GAGTTGAACAAAGGGAGTGATGATCTAGGAGGAGACTTATCATCTCCTGC
GCTCGCTGATAACGTGTGTGGAACAAGCGTAGGGTGAGCGTTGTTTGGAT
GTACAGTGCACCACCACGACGGGGTTCCGGCCTGGATTACCTCTGAGAGG
AATGTCTTCAATATGTACATAGGATGGTGGGAGGTGGGCGCATAGGGAGG
AAGCGATATAGTTAAGAGGCTTCCATAGATATATTAAGAGCGGATGAGCA
CAAAAGATGAGTGGAAGGACGAAGAAGGGAAGGGAATAAAACGTAGACGA
TGAGATGGGTTTGCTCGACGTCTTCGGGTCTGCTTTGTTATTGCTCTTCT
TTGCCTCCCTCGCCCACTCCCCTCGTCCCCCTCCTCCTTCGAAAATGCGT
ACGGCCTGAAGTCTCCCCGCGAATCTTGTAAATCGTTTGCAGAAGCTTGA
GAATTGCGACAGATCAAACTATCCGCATCGACTCCCTCCTCCTCCTGCCC
CGACTCTCACACCCGTTGCCTTCCCACCCTATTTCCTCTTTGTTGCCATA
ATATCCTCGATGAGCTTAATGGATATGCGCTACTGCTGTGAGGTCTGCCA
CGGGCTATATTCGCAAGACCACGTTGCTGGAATATGCACATGGCGACGTG
CCAATTTGTGAGTGGGAGTTGGGAGATACAGGCCGTACCATCATGTTTAC
CTGAGCACCAAACACATTTCTATGTGCACAGGAATCACCACGCAATTATA
GTGACCCGGAATCTTATTAGTAGTCGCCTGCAAGAGGCTCACCGCTCTCC
TTTGTTCTTTGTGTTGCCATCTGCTGAAGAAGTAGCTCGGTCCTCGTCTG
TGGCTTTTAAACTGTGCTTTCCCCTCAACCATGCCGCACGCCGCCCTCCC
ATAACTCTCTCTCTATCTTTCCTTCCCTTCTTGCCATTGCTCATGTGCAA
ATTCACGGTAAATCGTGATTTAATGGATCGATTCTCTTCCTACCTCTCAT
CTTTCTTCCTTCTTCAGTTGTGCCACAGTGGCCTTGCAGAAGGGGAATCT
TCAAATCCTCATTTCATCCACCACTCAGCCCACTCCTTTCTTCCTTTTCC
CCGCAACCCTTAAAGGGAAGGCGACTCAGTCGAAAAACAACATGCAATAT
CTAATATACAGACTAAAACCTCCCTCTCCCTTCACCCTCCTCCCTCTCTC
CCTCCCGTACCCTCCCTCCCTCTCTCCGCAACACTTGCCCTAATACTTGG
GATCATTCCAGGGCGAGTCCTTGGCAAAACAGAATTGAGAGATGTTCACC
AGAGTCCCTTGCTCCCACTGCCCCTTCAGCACATCCCCGCCCTCCTCCA back to topCoding sequence (CDS) from alignment at scaffold_69:53525..56623- >mRNA_10819 ID=mRNA_10819|Name=jgi.p|Nanoce1779_2|612973|organism=Nannochloropsis oceanica|type=CDS|length=738bp|location=Sequence derived from alignment at scaffold_69:53525..56623- (Nannochloropsis oceanica)
ATGCATAGCCTCATCATTCAAGCTGCTCTTCTTCTATGCTGCCTTCTGTA
TTCTGCCGCCTTCCTCTTGCCCTGTTCCTCGTCTTGTTCACTCCTCTCCA
GCTCGACGACGAGACTACACGCATCACCGTACAATTATCCCCCTCCCCCG
GGGTCTGGCAGGCGTAGAAGGGCTAGTAAATGGATTGATGCCGAGCTGAT
GAAGCAAAAGGAGTTGGAGAAGCGCCAAGGCAAGCAACAGGGGACTGCCA
CCGGCTCGGGGCCTGACCTGTTTCCCTCCCCAACAGGCAGAATCAGCAGC
AACAAGGAGAAGGACAAAAAATTTCTTAGTCAGGCGCGACAGCAGTTGCA
AGGGGAAGTGGACACGTTGATCGAGCGGCTGACTGGCATCTACAAGCAGG
TCAAGGACCAAAGCAACAAGATCACAACCTTTGGCGTGGCCGAGTTCAAC
CCCAAGGTGGCCACGTTAACGGACCAGATTGGAGTCGAGCTTGAAAGCTT
GCTAGGGCGCTTGAAGGGCTTGAAGGCAGCACTGAGGGACGGAGAGGGGG
AGGCCGGGGGGGAAGCAGCGGGAGGAACAGGGAAAGGGACACCAGATTTT
TTGGTGACGCAGAGTTTTGCTTTGAAGGCTTTGAGCAAGGACTTGGAGGG
GCTCCTTTTCTTGATCGAGGCCCGAGAACGGGAGGTGGACATCTTATTGC
GATCGCTGGGCATGGAAGAGGGAGGAGAGGAGGACTGA back to top
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