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Properties
| Property Name | Value |
|---|
| TranscriptId | 570145 |
| Track | FilteredModels2 |
| ProteinId | 570059 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_69 | supercontig | scaffold_69:43274..45091 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10814 ID=mRNA_10814|Name=jgi.p|Nanoce1779_2|570059|organism=Nannochloropsis oceanica|type=mRNA|length=1446bp
ATGGGGAAATTTATGTCAGCACAGGAAATCAGCACGGAAGGAGGCCACCC
AATGCCGAACGCATCAAATGCCGCCGCCTCTCCCAGAACCAAGTACGGCA
CCCTCCCTTGCACGCCCCCCAGCACAGCCACCGTCGCTGCTCACCCTGCG
TCTACCCTCGACTCCGCCACGGTCCTTTCCCTGGCCCTCATCGTGGTCCT
GGCAGTCGGCTCCTGCAATTCATTGACTTACAAAATCATGTACGAAGCCT
ACGGGCCCAAGGGCGCTTTCTTTGTCTCAACGGGCGTCAATGTCCTGTAT
GTGATTTATGGAGGCCTCCTGCTCTACCCCCGCATGTATTTCTCCGACAG
CGTCACCCCCGCGATGCAAGCCCTCCCCAAACATCGCTTTCTCATCATGG
GCTTCCTCGACAGCTGCGGCACCTTCTTAGCGGCCATGGGTGCCGTCTAC
ACCCCTGGAAGCGTGCAAACCTTGCTCAACCAAACCCTCATTCCCATCAC
CATGCTTGTCTCCTTCCTCTACCTCAAGACGAGATTTACGCTCATCCAGC
TCGGAGGCGCGGCCTTTGTCCTGGCAGGGGCGGGTATCACAGTCTTACCC
ACCTTCTGGGAGGGTCACAAGGGGGGCGGAGAAGGAATTGGAGGTAGACC
GGCCCCATCGCGATGGTATGCGAACCTGATTTTCTTCCTTAGCAACGTCC
CCGTGGCTTGCTCCCAAGTGTACAAGGAGAAGGCTTTCAAGCGGGACCGC
GTCGACGTCCTCTACCTCACCCAGTGGGTCTCCGTCTTCCAACTCCTCTT
CGGTCTGGGCCTCGCCCCCCTCCAAGCCCTGCCTGGCATTGGCAGCGCGC
ATGGCGTCCCCATTTCCTCTATCCCCTCCTCCTTCAGGCGCAGCTGGCAA
TGCTTCCTGCAAACGCCCACGTCAGGCTGTGCCGACCAGCACCCGTCCCC
CTCCCTTCTCCTCCTTGGATTTTGCGGCGTTAACCTCACTTTCAACACGG
CAGGCCTGTTCGTCTCAAAGCACGGGTCCGCCATTCTTAATGTGATCACG
TACGCCGTACTCCTGCCCATTACCACCCTCCTCTTCTCCCTCCATCCCTT
GATGGGCGCCTACACCGAGCCTTTGCGAGCAACGACGGTGGTGGGGCTAC
TGGTCGTCGTGCTCGGCTTCTATCTCTATCAGGAACCAGTCTTGGATCTG
GAGAAAAGGAGCATGGCAGAAGGGAGAGAAGAGGTGACGGCTGAGGAGGA
GGAAGAGGGGATGAAGGAGGGGGAATGGGACATGCGTGTGAGGGTGCCGT
CGTTTCAGGAGAGGGTAGTGGCAGGACTAGGGCCAGCTGTGTTCCAGCAG
TCGCATGGGAGCCAAGAGTATAACGCGCGTTACCACCACCACCACCACCA
TGACACTAAAACGGCGGTGGACGGCACGGCTCGAGAGGGTGTTTAG back to topprotein sequence of jgi.p|Nanoce1779_2|570059 >mRNA_10814-protein ID=mRNA_10814-protein|Name=jgi.p|Nanoce1779_2|570059|organism=Nannochloropsis oceanica|type=polypeptide|length=482bp
MGKFMSAQEISTEGGHPMPNASNAAASPRTKYGTLPCTPPSTATVAAHPA
STLDSATVLSLALIVVLAVGSCNSLTYKIMYEAYGPKGAFFVSTGVNVLY
VIYGGLLLYPRMYFSDSVTPAMQALPKHRFLIMGFLDSCGTFLAAMGAVY
TPGSVQTLLNQTLIPITMLVSFLYLKTRFTLIQLGGAAFVLAGAGITVLP
TFWEGHKGGGEGIGGRPAPSRWYANLIFFLSNVPVACSQVYKEKAFKRDR
VDVLYLTQWVSVFQLLFGLGLAPLQALPGIGSAHGVPISSIPSSFRRSWQ
CFLQTPTSGCADQHPSPSLLLLGFCGVNLTFNTAGLFVSKHGSAILNVIT
YAVLLPITTLLFSLHPLMGAYTEPLRATTVVGLLVVVLGFYLYQEPVLDL
EKRSMAEGREEVTAEEEEEGMKEGEWDMRVRVPSFQERVVAGLGPAVFQQ
SHGSQEYNARYHHHHHHDTKTAVDGTAREGV* back to topmRNA from alignment at scaffold_69:43274..45091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10814 ID=mRNA_10814|Name=jgi.p|Nanoce1779_2|570059|organism=Nannochloropsis oceanica|type=mRNA|length=1818bp|location=Sequence derived from alignment at scaffold_69:43274..45091- (Nannochloropsis oceanica)
ATGGGGAAATTTATGTCAGCACAGGAAATCAGCACGGAAGGAGGCCACCC
AATGCCGAACGCATCAAATGCCGCCGCCTCTCCCAGAACCAAGGTAAGCC
GTCGCCTCCTCTTCTAGTGCGTGGTGATTTGTGCAAAAGTGCAAGGCCTG
TAGCACATGTTAAAGCTACAGAAGCAAAAAGAGAGGCCCAAAATACCTGT
AATTAATACCTTGCCCACCGCCTTAGCCCTTACCCTCCCTTAGTCTAGCA
CCCGCCGCAACGCTAACCCTAACACTACACCTTACTCACAACCTTGTCTT
CCCCATCTCTTCCCTATCCAACAGTACGGCACCCTCCCTTGCACGCCCCC
CAGCACAGCCACCGTCGCTGCTCACCCTGCGTCTACCCTCGACTCCGCCA
CGGTCCTTTCCCTGGCCCTCATCGTGGTCCTGGCAGTCGGCTCCTGCAAT
TCATTGACTTACAAAATCATGTACGAAGCCTACGGGCCCAAGGGCGCTTT
CTTTGTCTCAACGGGCGTCAATGTCCTGTATGTGATTTATGGAGGCCTCC
TGCTCTACCCCCGCATGTATTTCTCCGACAGCGTCACCCCCGCGATGCAA
GCCCTCCCCAAACATCGCTTTCTCATCATGGGCTTCCTCGACAGCTGCGG
CACCTTCTTAGCGGCCATGGGTGCCGTCTACACCCCTGGAAGCGTGCAAA
CCTTGCTCAACCAAACCCTCATTCCCATCACCATGCTTGTCTCCTTCCTC
TACCTCAAGACGAGATTTACGCTCATCCAGCTCGGAGGCGCGGCCTTTGT
CCTGGCAGGGGCGGGTATCACAGTCTTACCCACCTTCTGGGAGGGTCACA
AGGGGGGCGGAGAAGGAATTGGAGGTAGACCGGCCCCATCGCGATGGTAT
GCGAACCTGATTTTCTTCCTTAGCAACGTCCCCGTGGCTTGCTCCCAAGT
GGTAAGGTCTACAAGGTGGAAAGGGGGAAGAAGGAAGGCAGGAAGATCAG
GATGTCGATTTCCACGACGAAGGTTTCAGCATCCATTCACACTCGTCTAG
TCCTCTCTTTCCTTAATCCATTCCTCATTTAATCGCCCACAGTACAAGGA
GAAGGCTTTCAAGCGGGACCGCGTCGACGTCCTCTACCTCACCCAGTGGG
TCTCCGTCTTCCAACTCCTCTTCGGTCTGGGCCTCGCCCCCCTCCAAGCC
CTGCCTGGCATTGGCAGCGCGCATGGCGTCCCCATTTCCTCTATCCCCTC
CTCCTTCAGGCGCAGCTGGCAATGCTTCCTGCAAACGCCCACGTCAGGCT
GTGCCGACCAGCACCCGTCCCCCTCCCTTCTCCTCCTTGGATTTTGCGGC
GTTAACCTCACTTTCAACACGGCAGGCCTGTTCGTCTCAAAGCACGGGTC
CGCCATTCTTAATGTGATCACGTACGCCGTACTCCTGCCCATTACCACCC
TCCTCTTCTCCCTCCATCCCTTGATGGGCGCCTACACCGAGCCTTTGCGA
GCAACGACGGTGGTGGGGCTACTGGTCGTCGTGCTCGGCTTCTATCTCTA
TCAGGAACCAGTCTTGGATCTGGAGAAAAGGAGCATGGCAGAAGGGAGAG
AAGAGGTGACGGCTGAGGAGGAGGAAGAGGGGATGAAGGAGGGGGAATGG
GACATGCGTGTGAGGGTGCCGTCGTTTCAGGAGAGGGTAGTGGCAGGACT
AGGGCCAGCTGTGTTCCAGCAGTCGCATGGGAGCCAAGAGTATAACGCGC
GTTACCACCACCACCACCACCATGACACTAAAACGGCGGTGGACGGCACG
GCTCGAGAGGGTGTTTAG back to topCoding sequence (CDS) from alignment at scaffold_69:43274..45091- >mRNA_10814 ID=mRNA_10814|Name=jgi.p|Nanoce1779_2|570059|organism=Nannochloropsis oceanica|type=CDS|length=4338bp|location=Sequence derived from alignment at scaffold_69:43274..45091- (Nannochloropsis oceanica)
TACAAGGAGAAGGCTTTCAAGCGGGACCGCGTCGACGTCCTCTACCTCAC
CCAGTGGGTCTCCGTCTTCCAACTCCTCTTCGGTCTGGGCCTCGCCCCCC
TCCAAGCCCTGCCTGGCATTGGCAGCGCGCATGGCGTCCCCATTTCCTCT
ATCCCCTCCTCCTTCAGGCGCAGCTGGCAATGCTTCCTGCAAACGCCCAC
GTCAGGCTGTGCCGACCAGCACCCGTCCCCCTCCCTTCTCCTCCTTGGAT
TTTGCGGCGTTAACCTCACTTTCAACACGGCAGGCCTGTTCGTCTCAAAG
CACGGGTCCGCCATTCTTAATGTGATCACGTACGCCGTACTCCTGCCCAT
TACCACCCTCCTCTTCTCCCTCCATCCCTTGATGGGCGCCTACACCGAGC
CTTTGCGAGCAACGACGGTGGTGGGGCTACTGGTCGTCGTGCTCGGCTTC
TATCTCTATCAGGAACCAGTCTTGGATCTGGAGAAAAGGAGCATGGCAGA
AGGGAGAGAAGAGGTGACGGCTGAGGAGGAGGAAGAGGGGATGAAGGAGG
GGGAATGGGACATGCGTGTGAGGGTGCCGTCGTTTCAGGAGAGGGTAGTG
GCAGGACTAGGGCCAGCTGTGTTCCAGCAGTCGCATGGGAGCCAAGAGTA
TAACGCGCGTTACCACCACCACCACCACCATGACACTAAAACGGCGGTGG
ACGGCACGGCTCGAGAGGGTGTTTAGTACGGCACCCTCCCTTGCACGCCC
CCCAGCACAGCCACCGTCGCTGCTCACCCTGCGTCTACCCTCGACTCCGC
CACGGTCCTTTCCCTGGCCCTCATCGTGGTCCTGGCAGTCGGCTCCTGCA
ATTCATTGACTTACAAAATCATGTACGAAGCCTACGGGCCCAAGGGCGCT
TTCTTTGTCTCAACGGGCGTCAATGTCCTGTATGTGATTTATGGAGGCCT
CCTGCTCTACCCCCGCATGTATTTCTCCGACAGCGTCACCCCCGCGATGC
AAGCCCTCCCCAAACATCGCTTTCTCATCATGGGCTTCCTCGACAGCTGC
GGCACCTTCTTAGCGGCCATGGGTGCCGTCTACACCCCTGGAAGCGTGCA
AACCTTGCTCAACCAAACCCTCATTCCCATCACCATGCTTGTCTCCTTCC
TCTACCTCAAGACGAGATTTACGCTCATCCAGCTCGGAGGCGCGGCCTTT
GTCCTGGCAGGGGCGGGTATCACAGTCTTACCCACCTTCTGGGAGGGTCA
CAAGGGGGGCGGAGAAGGAATTGGAGGTAGACCGGCCCCATCGCGATGGT
ATGCGAACCTGATTTTCTTCCTTAGCAACGTCCCCGTGGCTTGCTCCCAA
GTGATGGGGAAATTTATGTCAGCACAGGAAATCAGCACGGAAGGAGGCCA
CCCAATGCCGAACGCATCAAATGCCGCCGCCTCTCCCAGAACCAAGTACA
AGGAGAAGGCTTTCAAGCGGGACCGCGTCGACGTCCTCTACCTCACCCAG
TGGGTCTCCGTCTTCCAACTCCTCTTCGGTCTGGGCCTCGCCCCCCTCCA
AGCCCTGCCTGGCATTGGCAGCGCGCATGGCGTCCCCATTTCCTCTATCC
CCTCCTCCTTCAGGCGCAGCTGGCAATGCTTCCTGCAAACGCCCACGTCA
GGCTGTGCCGACCAGCACCCGTCCCCCTCCCTTCTCCTCCTTGGATTTTG
CGGCGTTAACCTCACTTTCAACACGGCAGGCCTGTTCGTCTCAAAGCACG
GGTCCGCCATTCTTAATGTGATCACGTACGCCGTACTCCTGCCCATTACC
ACCCTCCTCTTCTCCCTCCATCCCTTGATGGGCGCCTACACCGAGCCTTT
GCGAGCAACGACGGTGGTGGGGCTACTGGTCGTCGTGCTCGGCTTCTATC
TCTATCAGGAACCAGTCTTGGATCTGGAGAAAAGGAGCATGGCAGAAGGG
AGAGAAGAGGTGACGGCTGAGGAGGAGGAAGAGGGGATGAAGGAGGGGGA
ATGGGACATGCGTGTGAGGGTGCCGTCGTTTCAGGAGAGGGTAGTGGCAG
GACTAGGGCCAGCTGTGTTCCAGCAGTCGCATGGGAGCCAAGAGTATAAC
GCGCGTTACCACCACCACCACCACCATGACACTAAAACGGCGGTGGACGG
CACGGCTCGAGAGGGTGTTTAGTACGGCACCCTCCCTTGCACGCCCCCCA
GCACAGCCACCGTCGCTGCTCACCCTGCGTCTACCCTCGACTCCGCCACG
GTCCTTTCCCTGGCCCTCATCGTGGTCCTGGCAGTCGGCTCCTGCAATTC
ATTGACTTACAAAATCATGTACGAAGCCTACGGGCCCAAGGGCGCTTTCT
TTGTCTCAACGGGCGTCAATGTCCTGTATGTGATTTATGGAGGCCTCCTG
CTCTACCCCCGCATGTATTTCTCCGACAGCGTCACCCCCGCGATGCAAGC
CCTCCCCAAACATCGCTTTCTCATCATGGGCTTCCTCGACAGCTGCGGCA
CCTTCTTAGCGGCCATGGGTGCCGTCTACACCCCTGGAAGCGTGCAAACC
TTGCTCAACCAAACCCTCATTCCCATCACCATGCTTGTCTCCTTCCTCTA
CCTCAAGACGAGATTTACGCTCATCCAGCTCGGAGGCGCGGCCTTTGTCC
TGGCAGGGGCGGGTATCACAGTCTTACCCACCTTCTGGGAGGGTCACAAG
GGGGGCGGAGAAGGAATTGGAGGTAGACCGGCCCCATCGCGATGGTATGC
GAACCTGATTTTCTTCCTTAGCAACGTCCCCGTGGCTTGCTCCCAAGTGA
TGGGGAAATTTATGTCAGCACAGGAAATCAGCACGGAAGGAGGCCACCCA
ATGCCGAACGCATCAAATGCCGCCGCCTCTCCCAGAACCAAGTACAAGGA
GAAGGCTTTCAAGCGGGACCGCGTCGACGTCCTCTACCTCACCCAGTGGG
TCTCCGTCTTCCAACTCCTCTTCGGTCTGGGCCTCGCCCCCCTCCAAGCC
CTGCCTGGCATTGGCAGCGCGCATGGCGTCCCCATTTCCTCTATCCCCTC
CTCCTTCAGGCGCAGCTGGCAATGCTTCCTGCAAACGCCCACGTCAGGCT
GTGCCGACCAGCACCCGTCCCCCTCCCTTCTCCTCCTTGGATTTTGCGGC
GTTAACCTCACTTTCAACACGGCAGGCCTGTTCGTCTCAAAGCACGGGTC
CGCCATTCTTAATGTGATCACGTACGCCGTACTCCTGCCCATTACCACCC
TCCTCTTCTCCCTCCATCCCTTGATGGGCGCCTACACCGAGCCTTTGCGA
GCAACGACGGTGGTGGGGCTACTGGTCGTCGTGCTCGGCTTCTATCTCTA
TCAGGAACCAGTCTTGGATCTGGAGAAAAGGAGCATGGCAGAAGGGAGAG
AAGAGGTGACGGCTGAGGAGGAGGAAGAGGGGATGAAGGAGGGGGAATGG
GACATGCGTGTGAGGGTGCCGTCGTTTCAGGAGAGGGTAGTGGCAGGACT
AGGGCCAGCTGTGTTCCAGCAGTCGCATGGGAGCCAAGAGTATAACGCGC
GTTACCACCACCACCACCACCATGACACTAAAACGGCGGTGGACGGCACG
GCTCGAGAGGGTGTTTAGTACGGCACCCTCCCTTGCACGCCCCCCAGCAC
AGCCACCGTCGCTGCTCACCCTGCGTCTACCCTCGACTCCGCCACGGTCC
TTTCCCTGGCCCTCATCGTGGTCCTGGCAGTCGGCTCCTGCAATTCATTG
ACTTACAAAATCATGTACGAAGCCTACGGGCCCAAGGGCGCTTTCTTTGT
CTCAACGGGCGTCAATGTCCTGTATGTGATTTATGGAGGCCTCCTGCTCT
ACCCCCGCATGTATTTCTCCGACAGCGTCACCCCCGCGATGCAAGCCCTC
CCCAAACATCGCTTTCTCATCATGGGCTTCCTCGACAGCTGCGGCACCTT
CTTAGCGGCCATGGGTGCCGTCTACACCCCTGGAAGCGTGCAAACCTTGC
TCAACCAAACCCTCATTCCCATCACCATGCTTGTCTCCTTCCTCTACCTC
AAGACGAGATTTACGCTCATCCAGCTCGGAGGCGCGGCCTTTGTCCTGGC
AGGGGCGGGTATCACAGTCTTACCCACCTTCTGGGAGGGTCACAAGGGGG
GCGGAGAAGGAATTGGAGGTAGACCGGCCCCATCGCGATGGTATGCGAAC
CTGATTTTCTTCCTTAGCAACGTCCCCGTGGCTTGCTCCCAAGTGATGGG
GAAATTTATGTCAGCACAGGAAATCAGCACGGAAGGAGGCCACCCAATGC
CGAACGCATCAAATGCCGCCGCCTCTCCCAGAACCAAG back to top
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