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Properties
| Property Name | Value |
|---|
| TranscriptId | 613035 |
| Track | FilteredModels2 |
| ProteinId | 612949 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_69 | supercontig | scaffold_69:33226..35987 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10811 ID=mRNA_10811|Name=jgi.p|Nanoce1779_2|612949|organism=Nannochloropsis oceanica|type=mRNA|length=2042bp
ACGACCTGGACCCGGAGGAGAACGACGAAGAAGCCTCCTTCTGCACCACG
CAAGAAGAAGAAGACGAGGACGAGGACGAGGACGAGGAAGAAGAAATCAA
GATGTTCGACCGCACCAAGATGCGCCTCTTCGCGGAAGAAGAGTTTGTGT
CCCCCCAGTACCTCTATCGCTTTGTGCGCGTGCCCATCGCCCGCCCCGGG
ATCTGCTACAGCATGAAGCAAGTCAAGCCGCACTACCACCTGCCCGCCTT
GGACGAGATTTATCACTTCCTCCGCACCCTCTTCAAGAAGGCCGCCCTCT
CATCCGAATGTGCCATCGTCTGCCTCATCTACGTAGAAAGACTGATGCAA
GTAGCCCACATACCGCTCGTCGCTATCACATGGCGACCCATCGTGCTCTG
CGGCCTCCTCCTCGCCTCCAAAGTCTGGCAAGACCTGTCTTCGTGGAACG
TGGAGTTCTCCCAGATCTTTCCCCATTTCTCCCTCCAGTCTATCAACCGC
CTCGAGCGCCTCTTTATCAACCAGCTCAAGTGGGACCTGTACATCTCCTC
CTCGCTCTACGCCAAGTACTACTTCGCCTTGCGGAGCCTTTACGAGAACA
AGGACGTCCGTCGTCGCTACAACACCTTCTTTATCAAGCCATCCCTCCAC
ACGGCCCGAAAGCCCCCCCCTCCTCCGCCACCTCCCTCCCTCCCGGGGGC
CGTGCCCAAGGCAGACGAGATCTCCCTGCGGACAGGGGTAGTGGCAGACG
ACCTCCGAGACATGTTTTCCAAAAGTGTATAGGAGGCCAAGACCTTCCTT
CCCGCCCTCCCTCCTTCCCTCCCTCCTTTCTTCCCTTCGGATAACCTCGA
GATAGGGAGATCCAGTCCTTGTTGCCCTTTGTTTCTCTGTCCCTCCCTCC
TCTTCTCGCTCTCGCTGTGTGTAAATAGATTTGTAAGATAGTCCAGCATC
AGAAGGGAGAGGCCAGCCGCCTACCTTCCCCAGAGGCTTTGGACCAGGGC
AAAGGAGGAGCAAGAGCAGGGGAAGCGAGGGCACACAGTCTATGATAGTG
ATTCTTTTCGACAGAATCTTAGGTCTTTTATTTTCATTCTGTGATTCTGC
TTTTGGTCTCTCATTGGACGAAGGTGGAGAAAGGGGAGAGAGATATGAGG
ACATGTCCTGGTGTGGACTAGGGGGAGGCCCGAGTAGAAGAGGCAAGAAG
TAGCAGCATGAAGACAAATGAATAAGAGACGCAAGAAGGAAAAATCGAAG
CGGAAGATGAAAGGAAAAGACGCAAAACGACTGATTCGAAAAAGCCATTG
GAAATGGATGATGGAGAGGAGGAGGAGGAGGGGAAGGGGATGATAAGACC
GACAACAAAGTATTCCGATGAAGGCAAAGTCAATTGAGATATGGGGGGCA
GCTTTTACGCGCGCCACGTGTGCAAGCCTTTGTCTGCACCTGTGTCTGTG
TCCATCTGTCTATGTGGGTATATGTGACACGATAGAAAAGGGGCTTACAT
CCGGGTAGCAGCAGCAGTAGCAGCAGCAGCAGTCGTAGAAATAGTAGTTT
CGGCAGAAATAGTAACAGCATCGATGGAAGCTGTGGTAAAAATAGAGGCG
AAGAGATATGTAAACAGTAGCTGATCATCCAGACTAAAGAGAGGCGAGAA
GGAATATGGAAGAGCTAAAGATCGGTAGAAATGAGGCAAGATGGCGGGTC
GCGGGCACCGTAAATGGTGACCTGCAAAGCAAGCAAGCGTTCAGACACAC
GTATCCGTACTCATACCCACATCCATCGTCCTCATATACCACTTGTCCTC
CTCCTTCTCTCCTGCCTTACCGTCCTCATCGCGTGCTTTCATTCTTGTTC
CCCTCGCTTTCTTTCCTTTCTTCCACCATTTTCGGTTCCCACTCTAACTT
CCTTTCGTCCTTCTTTCCTCCCTCCCCCCCCCCTCTTCCTCGACAATTTT
TACGCCTCTTCACTCCTCTTTTTTCCCTTTTCTCCCACCTTCTTCACCTC
CTTCTCCTCCTTGTCCTTCTCTCCCTCCACTCTTCTTTTCTC back to topprotein sequence of jgi.p|Nanoce1779_2|612949 >mRNA_10811-protein ID=mRNA_10811-protein|Name=jgi.p|Nanoce1779_2|612949|organism=Nannochloropsis oceanica|type=polypeptide|length=227bp
MFDRTKMRLFAEEEFVSPQYLYRFVRVPIARPGICYSMKQVKPHYHLPAL
DEIYHFLRTLFKKAALSSECAIVCLIYVERLMQVAHIPLVAITWRPIVLC
GLLLASKVWQDLSSWNVEFSQIFPHFSLQSINRLERLFINQLKWDLYISS
SLYAKYYFALRSLYENKDVRRRYNTFFIKPSLHTARKPPPPPPPPSLPGA
VPKADEISLRTGVVADDLRDMFSKSV* back to topmRNA from alignment at scaffold_69:33226..35987+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10811 ID=mRNA_10811|Name=jgi.p|Nanoce1779_2|612949|organism=Nannochloropsis oceanica|type=mRNA|length=2762bp|location=Sequence derived from alignment at scaffold_69:33226..35987+ (Nannochloropsis oceanica)
ACGACCTGGACCCGGAGGAGAACGACGAAGAAGCCTCCTTCTGCACCACG
CAAGAAGAAGAAGTATGCCCTCCTTTTCTACGCCCTCCCTCCTTCCTTTC
CTCCCTCCCTCCCTCCCTCCCTCGAATTTGGGTTGAGTCGTCACCATTTG
ACTGTCATACTTAATGTTGCTTTTCCCCCTCCCTTCCTCCCTCCCTTCTT
CCCCCACCCCGAGGACGAGGACGAGGACGAGGACGAGGAAGAAGAAATCA
AGATGTTCGACCGCACCAAGATGCGCCTCTTCGCGGAAGAAGAGTTTGTG
TCCCCCCAGTACCTCTATCGCTTTGTGCGCGTGCCCATCGCCCGCCCCGG
GATCTGCTACAGGTGCGTGTGGGTGTGTGGATCCCCCCTGTCGCCCTCCC
TCCCGCCCTCCCTCCCTCCCCTACTTCATGTCCACCCACCCATCCTCATC
CACGTGGCCCATCCCGCACCCCATTTCCCGCCTTCCTCCCCTCCCTCCCT
CCCTTCCTCCTCCCTCAGCATGAAGCAAGTCAAGCCGCACTACCACCTGC
CCGCCTTGGACGAGATTTATCACTTCCTCCGCACCCTCTTCAAGAAGGCC
GCCCTCTCATCCGAATGTGCCATCGTCTGCCTCATCTACGTAGAAAGGTA
AGCCGTAGTTTCCTTCCTTCCCGCCCTCCCTCTTTTTCTTCACGTGTAGA
GCAAGGGAGAAGGGAGGGAGGGAGGGAACGAAGACAAAGATCCCCACTTC
CCTTGACTCCGTACACTCACTCCATCCGCTTAGACTGATGCAAGTAGCCC
ACATACCGCTCGTCGCTATCACATGGCGACCCATCGTGCTCTGCGGCCTC
CTCCTCGCCTCCAAAGGTACGAAGGTACCCCCCCCTCTTCTCCCTCCTTT
CTTCTGCCTCCTTCAAATGGAGGCTTCCTCCAAAACCCATTCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCAGTCTGGCAAGACCTGTCTTCGTGGAAC
GTGGAGTTCTCCCAGATCTTTCCCCATTTCTCCCTCCAGTCTATCAACCG
CCTCGAGCGCCTCTTTATCAACCAGCTCAAGTGGGACCTGTACATCTCCT
CCTCGCTCTACGCCAAGTACTACTTCGCCTTGCGGAGCCTTTACGAGAAC
GTACGAGACCTTCCCTCCCTCCCTCCCTCCTTCCCTTTCCCCCTCTCTCC
CTTCCTCCTTTTCCTTTCGGAAGAGAGTATCGTTCCGCTCACCTACCCGC
CTTTCTTTACCCTCTTGCTCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTT
CCTCTCTCCCCTCCCGCAGAAGGACGTCCGTCGTCGCTACAACACCTTCT
TTATCAAGCCATCCCTCCACACGGCCCGAAAGCCCCCCCCTCCTCCGCCA
CCTCCCTCCCTCCCGGGGGCCGTGCCCAAGGCAGACGAGATCTCCCTGCG
GACAGGGGTAGTGGCAGACGACCTCCGAGACATGTTTTCCAAAAGTGTAT
AGGAGGCCAAGACCTTCCTTCCCGCCCTCCCTCCTTCCCTCCCTCCTTTC
TTCCCTTCGGATAACCTCGAGATAGGGAGATCCAGTCCTTGTTGCCCTTT
GTTTCTCTGTCCCTCCCTCCTCTTCTCGCTCTCGCTGTGTGTAAATAGAT
TTGTAAGATAGTCCAGCATCAGAAGGGAGAGGCCAGCCGCCTACCTTCCC
CAGAGGCTTTGGACCAGGGCAAAGGAGGAGCAAGAGCAGGGGAAGCGAGG
GCACACAGTCTATGATAGTGATTCTTTTCGACAGAATCTTAGGTCTTTTA
TTTTCATTCTGTGATTCTGCTTTTGGTCTCTCATTGGACGAAGGTGGAGA
AAGGGGAGAGAGATATGAGGACATGTCCTGGTGTGGACTAGGGGGAGGCC
CGAGTAGAAGAGGCAAGAAGTAGCAGCATGAAGACAAATGAATAAGAGAC
GCAAGAAGGAAAAATCGAAGCGGAAGATGAAAGGAAAAGACGCAAAACGA
CTGATTCGAAAAAGCCATTGGAAATGGATGATGGAGAGGAGGAGGAGGAG
GGGAAGGGGATGATAAGACCGACAACAAAGTATTCCGATGAAGGCAAAGT
CAATTGAGATATGGGGGGCAGCTTTTACGCGCGCCACGTGTGCAAGCCTT
TGTCTGCACCTGTGTCTGTGTCCATCTGTCTATGTGGGTATATGTGACAC
GATAGAAAAGGGGCTTACATCCGGGTAGCAGCAGCAGTAGCAGCAGCAGC
AGTCGTAGAAATAGTAGTTTCGGCAGAAATAGTAACAGCATCGATGGAAG
CTGTGGTAAAAATAGAGGCGAAGAGATATGTAAACAGTAGCTGATCATCC
AGACTAAAGAGAGGCGAGAAGGAATATGGAAGAGCTAAAGATCGGTAGAA
ATGAGGCAAGATGGCGGGTCGCGGGCACCGTAAATGGTGACCTGCAAAGC
AAGCAAGCGTTCAGACACACGTATCCGTACTCATACCCACATCCATCGTC
CTCATATACCACTTGTCCTCCTCCTTCTCTCCTGCCTTACCGTCCTCATC
GCGTGCTTTCATTCTTGTTCCCCTCGCTTTCTTTCCTTTCTTCCACCATT
TTCGGTTCCCACTCTAACTTCCTTTCGTCCTTCTTTCCTCCCTCCCCCCC
CCCTCTTCCTCGACAATTTTTACGCCTCTTCACTCCTCTTTTTTCCCTTT
TCTCCCACCTTCTTCACCTCCTTCTCCTCCTTGTCCTTCTCTCCCTCCAC
TCTTCTTTTCTC back to topCoding sequence (CDS) from alignment at scaffold_69:33226..35987+ >mRNA_10811 ID=mRNA_10811|Name=jgi.p|Nanoce1779_2|612949|organism=Nannochloropsis oceanica|type=CDS|length=3405bp|location=Sequence derived from alignment at scaffold_69:33226..35987+ (Nannochloropsis oceanica)
ATGTTCGACCGCACCAAGATGCGCCTCTTCGCGGAAGAAGAGTTTGTGTC
CCCCCAGTACCTCTATCGCTTTGTGCGCGTGCCCATCGCCCGCCCCGGGA
TCTGCTACAGCATGAAGCAAGTCAAGCCGCACTACCACCTGCCCGCCTTG
GACGAGATTTATCACTTCCTCCGCACCCTCTTCAAGAAGGCCGCCCTCTC
ATCCGAATGTGCCATCGTCTGCCTCATCTACGTAGAAAGACTGATGCAAG
TAGCCCACATACCGCTCGTCGCTATCACATGGCGACCCATCGTGCTCTGC
GGCCTCCTCCTCGCCTCCAAAGTCTGGCAAGACCTGTCTTCGTGGAACGT
GGAGTTCTCCCAGATCTTTCCCCATTTCTCCCTCCAGTCTATCAACCGCC
TCGAGCGCCTCTTTATCAACCAGCTCAAGTGGGACCTGTACATCTCCTCC
TCGCTCTACGCCAAGTACTACTTCGCCTTGCGGAGCCTTTACGAGAACAA
GGACGTCCGTCGTCGCTACAACACCTTCTTTATCAAGCCATCCCTCCACA
CGGCCCGAAAGCCCCCCCCTCCTCCGCCACCTCCCTCCCTCCCGGGGGCC
GTGCCCAAGGCAGACGAGATCTCCCTGCGGACAGGGGTAGTGGCAGACGA
CCTCCGAGACATGTTTTCCAAAAGTGTATAGATGTTCGACCGCACCAAGA
TGCGCCTCTTCGCGGAAGAAGAGTTTGTGTCCCCCCAGTACCTCTATCGC
TTTGTGCGCGTGCCCATCGCCCGCCCCGGGATCTGCTACAGCATGAAGCA
AGTCAAGCCGCACTACCACCTGCCCGCCTTGGACGAGATTTATCACTTCC
TCCGCACCCTCTTCAAGAAGGCCGCCCTCTCATCCGAATGTGCCATCGTC
TGCCTCATCTACGTAGAAAGACTGATGCAAGTAGCCCACATACCGCTCGT
CGCTATCACATGGCGACCCATCGTGCTCTGCGGCCTCCTCCTCGCCTCCA
AAGTCTGGCAAGACCTGTCTTCGTGGAACGTGGAGTTCTCCCAGATCTTT
CCCCATTTCTCCCTCCAGTCTATCAACCGCCTCGAGCGCCTCTTTATCAA
CCAGCTCAAGTGGGACCTGTACATCTCCTCCTCGCTCTACGCCAAGTACT
ACTTCGCCTTGCGGAGCCTTTACGAGAACAAGGACGTCCGTCGTCGCTAC
AACACCTTCTTTATCAAGCCATCCCTCCACACGGCCCGAAAGCCCCCCCC
TCCTCCGCCACCTCCCTCCCTCCCGGGGGCCGTGCCCAAGGCAGACGAGA
TCTCCCTGCGGACAGGGGTAGTGGCAGACGACCTCCGAGACATGTTTTCC
AAAAGTGTATAGATGTTCGACCGCACCAAGATGCGCCTCTTCGCGGAAGA
AGAGTTTGTGTCCCCCCAGTACCTCTATCGCTTTGTGCGCGTGCCCATCG
CCCGCCCCGGGATCTGCTACAGCATGAAGCAAGTCAAGCCGCACTACCAC
CTGCCCGCCTTGGACGAGATTTATCACTTCCTCCGCACCCTCTTCAAGAA
GGCCGCCCTCTCATCCGAATGTGCCATCGTCTGCCTCATCTACGTAGAAA
GACTGATGCAAGTAGCCCACATACCGCTCGTCGCTATCACATGGCGACCC
ATCGTGCTCTGCGGCCTCCTCCTCGCCTCCAAAGTCTGGCAAGACCTGTC
TTCGTGGAACGTGGAGTTCTCCCAGATCTTTCCCCATTTCTCCCTCCAGT
CTATCAACCGCCTCGAGCGCCTCTTTATCAACCAGCTCAAGTGGGACCTG
TACATCTCCTCCTCGCTCTACGCCAAGTACTACTTCGCCTTGCGGAGCCT
TTACGAGAACAAGGACGTCCGTCGTCGCTACAACACCTTCTTTATCAAGC
CATCCCTCCACACGGCCCGAAAGCCCCCCCCTCCTCCGCCACCTCCCTCC
CTCCCGGGGGCCGTGCCCAAGGCAGACGAGATCTCCCTGCGGACAGGGGT
AGTGGCAGACGACCTCCGAGACATGTTTTCCAAAAGTGTATAGATGTTCG
ACCGCACCAAGATGCGCCTCTTCGCGGAAGAAGAGTTTGTGTCCCCCCAG
TACCTCTATCGCTTTGTGCGCGTGCCCATCGCCCGCCCCGGGATCTGCTA
CAGCATGAAGCAAGTCAAGCCGCACTACCACCTGCCCGCCTTGGACGAGA
TTTATCACTTCCTCCGCACCCTCTTCAAGAAGGCCGCCCTCTCATCCGAA
TGTGCCATCGTCTGCCTCATCTACGTAGAAAGACTGATGCAAGTAGCCCA
CATACCGCTCGTCGCTATCACATGGCGACCCATCGTGCTCTGCGGCCTCC
TCCTCGCCTCCAAAGTCTGGCAAGACCTGTCTTCGTGGAACGTGGAGTTC
TCCCAGATCTTTCCCCATTTCTCCCTCCAGTCTATCAACCGCCTCGAGCG
CCTCTTTATCAACCAGCTCAAGTGGGACCTGTACATCTCCTCCTCGCTCT
ACGCCAAGTACTACTTCGCCTTGCGGAGCCTTTACGAGAACAAGGACGTC
CGTCGTCGCTACAACACCTTCTTTATCAAGCCATCCCTCCACACGGCCCG
AAAGCCCCCCCCTCCTCCGCCACCTCCCTCCCTCCCGGGGGCCGTGCCCA
AGGCAGACGAGATCTCCCTGCGGACAGGGGTAGTGGCAGACGACCTCCGA
GACATGTTTTCCAAAAGTGTATAGATGTTCGACCGCACCAAGATGCGCCT
CTTCGCGGAAGAAGAGTTTGTGTCCCCCCAGTACCTCTATCGCTTTGTGC
GCGTGCCCATCGCCCGCCCCGGGATCTGCTACAGCATGAAGCAAGTCAAG
CCGCACTACCACCTGCCCGCCTTGGACGAGATTTATCACTTCCTCCGCAC
CCTCTTCAAGAAGGCCGCCCTCTCATCCGAATGTGCCATCGTCTGCCTCA
TCTACGTAGAAAGACTGATGCAAGTAGCCCACATACCGCTCGTCGCTATC
ACATGGCGACCCATCGTGCTCTGCGGCCTCCTCCTCGCCTCCAAAGTCTG
GCAAGACCTGTCTTCGTGGAACGTGGAGTTCTCCCAGATCTTTCCCCATT
TCTCCCTCCAGTCTATCAACCGCCTCGAGCGCCTCTTTATCAACCAGCTC
AAGTGGGACCTGTACATCTCCTCCTCGCTCTACGCCAAGTACTACTTCGC
CTTGCGGAGCCTTTACGAGAACAAGGACGTCCGTCGTCGCTACAACACCT
TCTTTATCAAGCCATCCCTCCACACGGCCCGAAAGCCCCCCCCTCCTCCG
CCACCTCCCTCCCTCCCGGGGGCCGTGCCCAAGGCAGACGAGATCTCCCT
GCGGACAGGGGTAGTGGCAGACGACCTCCGAGACATGTTTTCCAAAAGTG
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