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Properties
| Property Name | Value |
|---|
| TranscriptId | 575336 |
| Track | FilteredModels2 |
| ProteinId | 575250 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:1174674..1176051 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1081 ID=mRNA_1081|Name=jgi.p|Nanoce1779_2|575250|organism=Nannochloropsis oceanica|type=mRNA|length=1065bp
CAGACCAAACAATAAATAGGACGTCAACTGTCAGTCTAAGTTGGTGAAGG
GAGAGCGGGATCTGGAGAGGGAAGGACACCCTTCCAAAGCAGATCAAAAA
AGAGAACGGCAACATCAACGGCGTCACCGTCAAGGTCATGTGGGGCCGGG
TCAAGGAGCTCTTTCGCATCCCAAAGTTGGCTGGTATTGGTGCCGAGAAA
GCACCACTCCCCATCTTAGCAGCCAACACCCTGGGTGCTGGAGGCACACC
AACCAAGCTAAAATGGACCGTGTTGACAGACTGCAGCATCGGGGGCAAAT
CCAAGGGGTCGTTCGAAGTGCTGCCAGCCGGAGACGCTGCGGAAGAGGAG
GAGGACGTCGGTGGTGGGGCAATGACGAAGACAGAGAGGAGAATACCCCT
TGCAGTCTTTTCCGGCCAGCTTTCAACCTTACGGCCTTCAATGGACCCCA
AAGTAAAGCGCACGGGGTACTCCGCCGTAAAAATCATCATGCCCCGGGCC
TTAAAAATCGAGAATTACGAGGGCCTCGAGCTTTCTGTCCGCACAGATGG
ACGGAACTACGTAACTAATCTTGAGGTAGTTAGAGCCTGCCTAGCTTTAT
ACGACAATCATGTGATTATCATTCATGCGAGAATGGACGCGTCCCATTGT
ACCAAATAAAGAGTACGGCGTAGCCTTTCGCGCCAATCAAACACGTCTCA
CCCTCCCATCATCCTTTCCCCCCACCTACAGGTGGACAGCTTCTTCCCCG
ACGAGCTCTACCAAGGGTACATAACAGGACTACCTGCAGGGCAGTGGTGG
ACGATCCAGTTACCTTTCAGAGACATGACCTTGACGCGTTTGGGGCGGTT
GTCGTACATCCAAAAGGAGCTTGACTCAACGTTTGCCTTGGAATCGATTG
GCTTCTTGGTGGCGGATGGAAAACCGGGCCCTTTTCGCTTGGAGATCGGC
GGGGTGAACGCTGTGGGGAAGGTTGAAGGGCGGCCGTTCGACGCGACAGT
CGGAGGCGGGGACGATGGTGCTGGGAGCAGTAAAGCGGATGAAGAAATGC
GGGAGGAAATGCAAG back to topprotein sequence of jgi.p|Nanoce1779_2|575250 >mRNA_1081-protein ID=mRNA_1081-protein|Name=jgi.p|Nanoce1779_2|575250|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MWGRVKELFRIPKLAGIGAEKAPLPILAANTLGAGGTPTKLKWTVLTDCS
IGGKSKGSFEVLPAGDAAEEEEDVGGGAMTKTERRIPLAVFSGQLSTLRP
SMDPKVKRTGYSAVKIIMPRALKIENYEGLELSVRTDGRNYVTNLEVVRA
CLALYDNHVIIIHARMDASHCTK* back to topmRNA from alignment at scaffold_2:1174674..1176051- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1081 ID=mRNA_1081|Name=jgi.p|Nanoce1779_2|575250|organism=Nannochloropsis oceanica|type=mRNA|length=1378bp|location=Sequence derived from alignment at scaffold_2:1174674..1176051- (Nannochloropsis oceanica)
CAGACCAAACAATAAATAGGACGTCAACTGTCAGTCTAAGTTGGTGAAGG
GAGAGCGGGATCTGGAGAGGGAAGGACACCCTTCCAAAGCAGATCAAAAA
AGAGAACGGCAACATCAACGGCGTCACCGTCAAGGTCATGTGGGGCCGGG
TCAAGGAGCTCTTTCGCATCCCAAAGTTGGCTGGTATTGGTGCCGAGAAA
GGTAAGCAGCCCAAGGGCTTCACGATATTTCTGCTTGGACTGTCATAATG
TTGAATAATAGACTGCAGCCTGCTCTCAACATACCCTTATGTCACAATCT
CCCACTCCCATTCCCCCACTCTTCTCTTGTAGCACCACTCCCCATCTTAG
CAGCCAACACCCTGGGTGCTGGAGGCACACCAACCAAGCTAAAATGGACC
GTGTTGACAGACTGCAGCATCGGGGGCAAATCCAAGGGGTCGTTCGAAGT
GCTGCCAGCCGGAGACGCTGCGGAAGAGGAGGAGGACGTCGGTGGTGGGG
CAATGACGAAGACAGAGAGGAGAATACCCCTTGCAGTCTTTTCCGGCCAG
CTTTCAACCTTACGGCCTTCAATGGACCCCAAGTAAGTTGTTTGGTGTCT
AATCCGTTTTTGGGCCTCGTTTTTGGGCCGGTGGCCTCGTCCCCGTCCCG
CGCAACGCGCAAGTTTGGCGTTCAGAGCGACACGTACACGCATAAGTTCC
CACCAACGAAATTCAATTCACGCCTCTCTGCCTTCAACTTATCTCTACAC
CCTCTGTATCGTAGAGTAAAGCGCACGGGGTACTCCGCCGTAAAAATCAT
CATGCCCCGGGCCTTAAAAATCGAGAATTACGAGGGCCTCGAGCTTTCTG
TCCGCACAGATGGACGGAACTACGTAACTAATCTTGAGGTAGTTAGAGCC
TGCCTAGCTTTATACGACAATCATGTGATTATCATTCATGCGAGAATGGA
CGCGTCCCATTGTACCAAATAAAGAGTACGGCGTAGCCTTTCGCGCCAAT
CAAACACGTCTCACCCTCCCATCATCCTTTCCCCCCACCTACAGGTGGAC
AGCTTCTTCCCCGACGAGCTCTACCAAGGGTACATAACAGGACTACCTGC
AGGGCAGTGGTGGACGATCCAGTTACCTTTCAGAGACATGACCTTGACGC
GTTTGGGGCGGTTGTCGTACATCCAAAAGGAGCTTGACTCAACGTTTGCC
TTGGAATCGATTGGCTTCTTGGTGGCGGATGGAAAACCGGGCCCTTTTCG
CTTGGAGATCGGCGGGGTGAACGCTGTGGGGAAGGTTGAAGGGCGGCCGT
TCGACGCGACAGTCGGAGGCGGGGACGATGGTGCTGGGAGCAGTAAAGCG
GATGAAGAAATGCGGGAGGAAATGCAAG back to topCoding sequence (CDS) from alignment at scaffold_2:1174674..1176051- >mRNA_1081 ID=mRNA_1081|Name=jgi.p|Nanoce1779_2|575250|organism=Nannochloropsis oceanica|type=CDS|length=1566bp|location=Sequence derived from alignment at scaffold_2:1174674..1176051- (Nannochloropsis oceanica)
AGTAAAGCGCACGGGGTACTCCGCCGTAAAAATCATCATGCCCCGGGCCT
TAAAAATCGAGAATTACGAGGGCCTCGAGCTTTCTGTCCGCACAGATGGA
CGGAACTACGTAACTAATCTTGAGGTAGTTAGAGCCTGCCTAGCTTTATA
CGACAATCATGTGATTATCATTCATGCGAGAATGGACGCGTCCCATTGTA
CCAAATAACACCACTCCCCATCTTAGCAGCCAACACCCTGGGTGCTGGAG
GCACACCAACCAAGCTAAAATGGACCGTGTTGACAGACTGCAGCATCGGG
GGCAAATCCAAGGGGTCGTTCGAAGTGCTGCCAGCCGGAGACGCTGCGGA
AGAGGAGGAGGACGTCGGTGGTGGGGCAATGACGAAGACAGAGAGGAGAA
TACCCCTTGCAGTCTTTTCCGGCCAGCTTTCAACCTTACGGCCTTCAATG
GACCCCAAATGTGGGGCCGGGTCAAGGAGCTCTTTCGCATCCCAAAGTTG
GCTGGTATTGGTGCCGAGAAAGAGTAAAGCGCACGGGGTACTCCGCCGTA
AAAATCATCATGCCCCGGGCCTTAAAAATCGAGAATTACGAGGGCCTCGA
GCTTTCTGTCCGCACAGATGGACGGAACTACGTAACTAATCTTGAGGTAG
TTAGAGCCTGCCTAGCTTTATACGACAATCATGTGATTATCATTCATGCG
AGAATGGACGCGTCCCATTGTACCAAATAACACCACTCCCCATCTTAGCA
GCCAACACCCTGGGTGCTGGAGGCACACCAACCAAGCTAAAATGGACCGT
GTTGACAGACTGCAGCATCGGGGGCAAATCCAAGGGGTCGTTCGAAGTGC
TGCCAGCCGGAGACGCTGCGGAAGAGGAGGAGGACGTCGGTGGTGGGGCA
ATGACGAAGACAGAGAGGAGAATACCCCTTGCAGTCTTTTCCGGCCAGCT
TTCAACCTTACGGCCTTCAATGGACCCCAAATGTGGGGCCGGGTCAAGGA
GCTCTTTCGCATCCCAAAGTTGGCTGGTATTGGTGCCGAGAAAGAGTAAA
GCGCACGGGGTACTCCGCCGTAAAAATCATCATGCCCCGGGCCTTAAAAA
TCGAGAATTACGAGGGCCTCGAGCTTTCTGTCCGCACAGATGGACGGAAC
TACGTAACTAATCTTGAGGTAGTTAGAGCCTGCCTAGCTTTATACGACAA
TCATGTGATTATCATTCATGCGAGAATGGACGCGTCCCATTGTACCAAAT
AACACCACTCCCCATCTTAGCAGCCAACACCCTGGGTGCTGGAGGCACAC
CAACCAAGCTAAAATGGACCGTGTTGACAGACTGCAGCATCGGGGGCAAA
TCCAAGGGGTCGTTCGAAGTGCTGCCAGCCGGAGACGCTGCGGAAGAGGA
GGAGGACGTCGGTGGTGGGGCAATGACGAAGACAGAGAGGAGAATACCCC
TTGCAGTCTTTTCCGGCCAGCTTTCAACCTTACGGCCTTCAATGGACCCC
AAATGTGGGGCCGGGTCAAGGAGCTCTTTCGCATCCCAAAGTTGGCTGGT
ATTGGTGCCGAGAAAG back to top
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