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Properties
| Property Name | Value |
|---|
| TranscriptId | 613007 |
| Track | FilteredModels2 |
| ProteinId | 612921 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_69 | supercontig | scaffold_69:18288..19626 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10805 ID=mRNA_10805|Name=jgi.p|Nanoce1779_2|612921|organism=Nannochloropsis oceanica|type=mRNA|length=1339bp
CAGCCACTTAAAAAATATGCCTCGCATCCTGCTTCTCGGCCTCGCGGTCA
CTCTTTTGACATTGGCCTTTTCTCCCCTGGCGGCCCGCGCCCAAGCGCTC
CGTAGTGCTTCACCCATTGTTGAGACACCTAACAACACGCCTGCGGCCGG
TAGTAGTGCCTTGGGTGCAGCTCCTGAAGGTGAAATGCCGGCGTACCCCA
AGGGTCCTATCCCTTCCCAGGGCTTTAACAAGCCTCGATCGAAAGCCGTT
AGCATGGTCAAGCTAACACAGATCAATTCTTCCACATGGCAGGATCCCGA
GGGCCACACCTGGTACACTTCGGAATACTGGGTTGCCAATACCGCTGCCT
ATGAGATTTGCGACGTAAAACTGGCCATACCTCTAGCGTCAGGTGTAAAC
TCGGAGAGTGTACGCATCAACTCTTCTTTCGCTCTTGTCTTTGGCGGCGT
CAACGACGACATGGCTAGCAGCAGCAACACCTATAACGACAACTATAACA
ACGATCGCAACAACGGAAATAATGCCGATATGCCCTATGCTGTCAAGCCC
AGAAAGGAGGCAGTTTCAACTTTGTTTTTCAACAGTGATGCGAATGAGCT
TACTGCCTCGCTGAGCCCTCCTTACGTGCGTGCTCTACGAGTGAAGGAAA
GTGTTGATATCGGATTTACTCTTGCGGGATCTCCTGGCCTCGCACAGACG
GATATGGCACGGGTTGTAGAAGCGCGATACTGTGACGGTGGAATTGAGGA
AATGCCGAAGAGAGAGCGGCAGGGACAGCAACAGCAAGACCTACAGCAGT
TGCAGCCCAACGGGGGCGGGAATGTCGGGAACGGGCAGCAACAGGGAGCG
GAGCAACAACTCGAAGATGTGGTCCGTCGTCCTGAGTACGCTGCGGACGG
ACATTAAGAAGTGGTGAAAACGGATTGCAATGAACGAACGGGTTACGAAT
GCAGTAAGAGTGGTATGTATACATCAGGAGATAAAATGATATGGAAAAGT
GAAGTGAAGTGAAATAGTGAATCGCTACTGAATGTTATGACTGAAAGAAA
ACTACTACCTTTAATACGAAGAGCGATATAGTCATATATATGTAAAGGTG
CGCACGGCTGGAGTCTTCTGAACTTATACATTACAGTGATGTTGAAGGAT
TGAAACCAGAATAGGTTTCGCTGACCAACACCTTTTTCCCATTGATCGGG
TCCAGCGTCATGAGAGAGCACAAAAGGACGGGAGTTAGACCGAGAACTGC
GAAGATCACCACAAAAGAAGAGACACTTACGGTTCCCTATCCCAAAATGT
CGTCAATTGTTTTACTTTGGTGCATACTGCGTGTACTTT back to topprotein sequence of jgi.p|Nanoce1779_2|612921 >mRNA_10805-protein ID=mRNA_10805-protein|Name=jgi.p|Nanoce1779_2|612921|organism=Nannochloropsis oceanica|type=polypeptide|length=297bp
MPRILLLGLAVTLLTLAFSPLAARAQALRSASPIVETPNNTPAAGSSALG
AAPEGEMPAYPKGPIPSQGFNKPRSKAVSMVKLTQINSSTWQDPEGHTWY
TSEYWVANTAAYEICDVKLAIPLASGVNSESVRINSSFALVFGGVNDDMA
SSSNTYNDNYNNDRNNGNNADMPYAVKPRKEAVSTLFFNSDANELTASLS
PPYVRALRVKESVDIGFTLAGSPGLAQTDMARVVEARYCDGGIEEMPKRE
RQGQQQQDLQQLQPNGGGNVGNGQQQGAEQQLEDVVRRPEYAADGH* back to topmRNA from alignment at scaffold_69:18288..19626- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10805 ID=mRNA_10805|Name=jgi.p|Nanoce1779_2|612921|organism=Nannochloropsis oceanica|type=mRNA|length=1339bp|location=Sequence derived from alignment at scaffold_69:18288..19626- (Nannochloropsis oceanica)
CAGCCACTTAAAAAATATGCCTCGCATCCTGCTTCTCGGCCTCGCGGTCA
CTCTTTTGACATTGGCCTTTTCTCCCCTGGCGGCCCGCGCCCAAGCGCTC
CGTAGTGCTTCACCCATTGTTGAGACACCTAACAACACGCCTGCGGCCGG
TAGTAGTGCCTTGGGTGCAGCTCCTGAAGGTGAAATGCCGGCGTACCCCA
AGGGTCCTATCCCTTCCCAGGGCTTTAACAAGCCTCGATCGAAAGCCGTT
AGCATGGTCAAGCTAACACAGATCAATTCTTCCACATGGCAGGATCCCGA
GGGCCACACCTGGTACACTTCGGAATACTGGGTTGCCAATACCGCTGCCT
ATGAGATTTGCGACGTAAAACTGGCCATACCTCTAGCGTCAGGTGTAAAC
TCGGAGAGTGTACGCATCAACTCTTCTTTCGCTCTTGTCTTTGGCGGCGT
CAACGACGACATGGCTAGCAGCAGCAACACCTATAACGACAACTATAACA
ACGATCGCAACAACGGAAATAATGCCGATATGCCCTATGCTGTCAAGCCC
AGAAAGGAGGCAGTTTCAACTTTGTTTTTCAACAGTGATGCGAATGAGCT
TACTGCCTCGCTGAGCCCTCCTTACGTGCGTGCTCTACGAGTGAAGGAAA
GTGTTGATATCGGATTTACTCTTGCGGGATCTCCTGGCCTCGCACAGACG
GATATGGCACGGGTTGTAGAAGCGCGATACTGTGACGGTGGAATTGAGGA
AATGCCGAAGAGAGAGCGGCAGGGACAGCAACAGCAAGACCTACAGCAGT
TGCAGCCCAACGGGGGCGGGAATGTCGGGAACGGGCAGCAACAGGGAGCG
GAGCAACAACTCGAAGATGTGGTCCGTCGTCCTGAGTACGCTGCGGACGG
ACATTAAGAAGTGGTGAAAACGGATTGCAATGAACGAACGGGTTACGAAT
GCAGTAAGAGTGGTATGTATACATCAGGAGATAAAATGATATGGAAAAGT
GAAGTGAAGTGAAATAGTGAATCGCTACTGAATGTTATGACTGAAAGAAA
ACTACTACCTTTAATACGAAGAGCGATATAGTCATATATATGTAAAGGTG
CGCACGGCTGGAGTCTTCTGAACTTATACATTACAGTGATGTTGAAGGAT
TGAAACCAGAATAGGTTTCGCTGACCAACACCTTTTTCCCATTGATCGGG
TCCAGCGTCATGAGAGAGCACAAAAGGACGGGAGTTAGACCGAGAACTGC
GAAGATCACCACAAAAGAAGAGACACTTACGGTTCCCTATCCCAAAATGT
CGTCAATTGTTTTACTTTGGTGCATACTGCGTGTACTTT back to topCoding sequence (CDS) from alignment at scaffold_69:18288..19626- >mRNA_10805 ID=mRNA_10805|Name=jgi.p|Nanoce1779_2|612921|organism=Nannochloropsis oceanica|type=CDS|length=891bp|location=Sequence derived from alignment at scaffold_69:18288..19626- (Nannochloropsis oceanica)
ATGCCTCGCATCCTGCTTCTCGGCCTCGCGGTCACTCTTTTGACATTGGC
CTTTTCTCCCCTGGCGGCCCGCGCCCAAGCGCTCCGTAGTGCTTCACCCA
TTGTTGAGACACCTAACAACACGCCTGCGGCCGGTAGTAGTGCCTTGGGT
GCAGCTCCTGAAGGTGAAATGCCGGCGTACCCCAAGGGTCCTATCCCTTC
CCAGGGCTTTAACAAGCCTCGATCGAAAGCCGTTAGCATGGTCAAGCTAA
CACAGATCAATTCTTCCACATGGCAGGATCCCGAGGGCCACACCTGGTAC
ACTTCGGAATACTGGGTTGCCAATACCGCTGCCTATGAGATTTGCGACGT
AAAACTGGCCATACCTCTAGCGTCAGGTGTAAACTCGGAGAGTGTACGCA
TCAACTCTTCTTTCGCTCTTGTCTTTGGCGGCGTCAACGACGACATGGCT
AGCAGCAGCAACACCTATAACGACAACTATAACAACGATCGCAACAACGG
AAATAATGCCGATATGCCCTATGCTGTCAAGCCCAGAAAGGAGGCAGTTT
CAACTTTGTTTTTCAACAGTGATGCGAATGAGCTTACTGCCTCGCTGAGC
CCTCCTTACGTGCGTGCTCTACGAGTGAAGGAAAGTGTTGATATCGGATT
TACTCTTGCGGGATCTCCTGGCCTCGCACAGACGGATATGGCACGGGTTG
TAGAAGCGCGATACTGTGACGGTGGAATTGAGGAAATGCCGAAGAGAGAG
CGGCAGGGACAGCAACAGCAAGACCTACAGCAGTTGCAGCCCAACGGGGG
CGGGAATGTCGGGAACGGGCAGCAACAGGGAGCGGAGCAACAACTCGAAG
ATGTGGTCCGTCGTCCTGAGTACGCTGCGGACGGACATTAA back to top
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