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Properties
| Property Name | Value |
|---|
| TranscriptId | 674946 |
| Track | FilteredModels2 |
| ProteinId | 674860 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_59 | supercontig | scaffold_59:50296..52501 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10793 ID=mRNA_10793|Name=jgi.p|Nanoce1779_2|674860|organism=Nannochloropsis oceanica|type=mRNA|length=1638bp
AGCTCAGGCACGTCTACAGGTAGGCATCCAGCACCTTGGGTTCTGCTAGG
TAATTTCTCTTTGTAGCTGCCGTGCCTCTCTAACCTCCCTGCACGCTCCG
TCTCGTGTGTCGGCGTGCCCCGGCGGGATTATCCTTTAATCGTTCCAAGG
CGAGGCCACACGCACCCAAGGAAATCGCTAGAAAGAAAATAGTTCTGCCC
CATGGCTTTATCCTCGTCCCGTGTCTTCTCGTTTCTTGGCGTCGGTGCTG
CGCTCCTCGCATTTCCTGAGCTTCTCATCCCCCTTCCCGATGGCCTCGTT
GTCGCAGCCAAAGCCTGGGGTCCTGCCAATGGGCCTCCCGTTCTAGCTCT
GCACGGATGGTTGGACAACGCAAACACATTCGATCGTCTTGCCCCCCCTC
TGGCTGCGGCGGGCCTAAGGGTTATGTGCATTGACTTTCCGGGGCATGGC
AAATCGGCGCATCGATCACCGGATGCCGTATACGCCTTCACAGACTACGT
GTACTACGTTTGGGCGTTGGCCAAACAATTGAAGTGGAAAAAATTCCAAA
TTCTCGGCCACTCGCTCGGCGCAGGCATTGGTCTGGCACTTGCAGGCACC
TACCCCGAAATGGTCGAGCGTATGGTGTGCATAGAGACCCTAGGTATTAT
CAGCAAGCCCGCCGAGAGCGCCCCCACCACATTACGGGAAGCAATCAGAC
AACGGGCGACCCTAGTAGAAGTGATGCGAAGAAATTTGGAAAAAGAAAAT
GTGAGGGGAAGGGGGGGAGGAAGGGGGGTTGGGAGTAAGGTTTATGCGAC
GGTAGAGGAGGCGGTGGAGGCAAGGTTGAGCACCGTGGGAAGGCTCCCAG
GGACGCAAACACTCGAGCCGTCTTCTGCCGCCATATTGGTCGGTAGAGGA
GCAGGGCCTGCAGATGCACCACATGCCAATGACTTGGTCTGGGGACATGA
TGGGAATGATGGAGGGGTACGGTTTCGGCATGACCAGCGGTTGGCGGCGT
CGGCGCACATTTACTTGACGGAAGAACAGTCGCGCGCGTTTTTGGCCGCA
AGTCGTTGTCCCGTGTTATTGTTACGAGGGGCCGAGGGGTGGCCGGCAGC
GTCGCCAGAGGAAGAGATTATGAGAGAGGCGGCGTTGGGAAATAGGTTGA
CGATGTTGAAGGTCCCGGGAAGTCACCATCTGCATTTGGATGAGAGCACA
TGCACGGAGGAGAGGGTGGTGAAGCCCGTGGTGGCATTTTTGGTGGAGGG
AGCGCGAGGCTTCACGTAGGATGGGGAGCTGTTTTTTCCACCAGCGTCAG
TCAGCTTTGCTATGTGATTTATACACTTCAGTGATGCTTATACTTGAGTG
AGATGATCCTGTACGCACAATGACATTGGTGCGACACGTTGGGACGGAAA
GCTGCGCACCAAGAACATATAGTAACTGGTAGGATTCTTTTCTTCAAGTC
CTCTACCTGCATCCTTGGAGGCTGGCTCGTGGACAAGAAATGTGTAGCTT
GATAAATATAGCGAGAGGTTACGAATAGGAAATGAGAGAGCTTGGTGTGG
TGTACCATATATAAGTGAGCATACAATGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG back to topprotein sequence of jgi.p|Nanoce1779_2|674860 >mRNA_10793-protein ID=mRNA_10793-protein|Name=jgi.p|Nanoce1779_2|674860|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MALSSSRVFSFLGVGAALLAFPELLIPLPDGLVVAAKAWGPANGPPVLAL
HGWLDNANTFDRLAPPLAAAGLRVMCIDFPGHGKSAHRSPDAVYAFTDYV
YYVWALAKQLKWKKFQILGHSLGAGIGLALAGTYPEMVERMVCIETLGII
SKPAESAPTTLREAIRQRATLVEVMRRNLEKENVRGRGGGRGVGSKVYAT
VEEAVEARLSTVGRLPGTQTLEPSSAAILVGRGAGPADAPHANDLVWGHD
GNDGGVRFRHDQRLAASAHIYLTEEQSRAFLAASRCPVLLLRGAEGWPAA
SPEEEIMREAALGNRLTMLKVPGSHHLHLDESTCTEERVVKPVVAFLVEG
ARGFT* back to topmRNA from alignment at scaffold_59:50296..52501- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10793 ID=mRNA_10793|Name=jgi.p|Nanoce1779_2|674860|organism=Nannochloropsis oceanica|type=mRNA|length=2206bp|location=Sequence derived from alignment at scaffold_59:50296..52501- (Nannochloropsis oceanica)
AGCTCAGGCACGTCTACAGGTAGGCATCCAGCACCTTGGGTTCTGCTAGG
TAATTTCTCTTTGTAGCTGCCGTGCCTCTCTAACCTCCCTGCACGCTCCG
TCTCGTGTGTCGGCGTGCCCCGGCGGGATTATCCTTTAATCGTTCCAAGG
CGAGGCCACACGCACCCAAGGAAATCGCTAGGTGAGGTTGGGAGACGCTG
TATGTTTTATAAGTTGGCCAGACCTGCAGGATGGTGGTGTCGTGGGAAGC
AAAATGCATAAGACACCTACATTCTATTTGAGTCTCCGCCTCCCTCAATC
CCTTTCTTCCGTCCTTCCCTCCACACAGAAAGAAAATAGTTCTGCCCCAT
GGCTTTATCCTCGTCCCGTGTCTTCTCGTTTCTTGGCGTCGGTGCTGCGC
TCCTCGCATTTCCTGGTACCACCACGGGCTTCGTCGTCCCCCCAACTCCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTCTCCTTCTCCTTCT
CCTCCTCCTTTGTGATTTCCTCCTCCCAGCCATCATCCAGCCAAGGCCCA
GTGTCCTCGTCTCTCCATCTTACAAGCCCCCTTTACGCCATCCCTCTTTC
TTCCCTCCCTCCCTCCCCCACCACCGCCGACTATGAAGAGCTTCTCATCC
CCCTTCCCGATGGCCTCGTTGTCGCAGCCAAAGCCTGGGGTCCTGCCAAT
GGGCCTCCCGTTCTAGCTCTGCACGGATGGTTGGACAACGCAAACACATT
CGATCGTCTTGCCCCCCCTCTGGCTGCGGCGGGCCTAAGGGTTATGTGCA
TTGACTTTCCGGGGCATGGCAAATCGGCGCATCGATCACCGGATGCCGTA
TACGCCTTCACAGACTACGTGTACTACGTTTGGGCGTTGGCCAAACAATT
GAAGTGGAAAGTAAGTTTGATTTAAACATGGTACTGTCCCATAATCCTCC
TTTATACAGAGTGAGTGTTCCAAACCACCTTGAAGCATGAACAAGATGGA
AAAAGTTGCCATTTAACTAACATTTCCTCTTGCTCTTTCTTCTCTATCCT
CACAAAAGAAATTCCAAATTCTCGGCCACTCGCTCGGCGCAGGCATTGGT
CTGGCACTTGCAGGCACCTACCCCGAAATGGTCGAGCGTATGGTGTGCAT
AGAGACCCTAGGTATTATCAGCAAGCCCGCCGAGAGCGCCCCCACCACAT
TACGGGAAGCAATCAGACAACGGGCGACCCTAGTAGAAGTGATGCGAAGA
AATTTGGAAAAAGAAAATGTGAGGGGAAGGGGGGGAGGAAGGGGGGTTGG
GAGTAAGGTTTATGCGACGGTAGAGGAGGCGGTGGAGGCAAGGTTGAGCA
CCGTGGGAAGGCTCCCAGGGACGCAAACACTCGAGCCGTCTTCTGCCGCC
ATATTGGTCGGTAGAGGAGCAGGGCCTGCAGATGCACCACATGCCAATGA
CTTGGTCTGGGGACATGATGGGAATGATGGAGGGGTACGGTTTCGGCATG
ACCAGCGGTTGGCGGCGTCGGCGCACATTTACTTGACGGAAGAACAGTCG
CGCGCGTTTTTGGCCGCAAGTCGTTGTCCCGTGTTATTGTTACGAGGGGC
CGAGGGGTGGCCGGCAGCGTCGCCAGAGGAAGAGATTATGAGAGAGGCGG
CGTTGGGAAATAGGTTGACGATGTTGAAGGTCCCGGGAAGTCACCATCTG
CATTTGGATGAGAGCACATGCACGGAGGAGAGGGTGGTGAAGCCCGTGGT
GGCATTTTTGGTGGAGGGAGCGCGAGGCTTCACGTAGGATGGGGAGCTGT
TTTTTCCACCAGCGTCAGTCAGCTTTGCTATGTGATTTATACACTTCAGT
GATGCTTATACTTGAGTGAGATGATCCTGTACGCACAATGACATTGGTGC
GACACGTTGGGACGGAAAGCTGCGCACCAAGAACATATAGTAACTGGTAG
GATTCTTTTCTTCAAGTCCTCTACCTGCATCCTTGGAGGCTGGCTCGTGG
ACAAGAAATGTGTAGCTTGATAAATATAGCGAGAGGTTACGAATAGGAAA
TGAGAGAGCTTGGTGTGGTGTACCATATATAAGTGAGCATACAATGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTG back to topCoding sequence (CDS) from alignment at scaffold_59:50296..52501- >mRNA_10793 ID=mRNA_10793|Name=jgi.p|Nanoce1779_2|674860|organism=Nannochloropsis oceanica|type=CDS|length=3204bp|location=Sequence derived from alignment at scaffold_59:50296..52501- (Nannochloropsis oceanica)
AAATTCCAAATTCTCGGCCACTCGCTCGGCGCAGGCATTGGTCTGGCACT
TGCAGGCACCTACCCCGAAATGGTCGAGCGTATGGTGTGCATAGAGACCC
TAGGTATTATCAGCAAGCCCGCCGAGAGCGCCCCCACCACATTACGGGAA
GCAATCAGACAACGGGCGACCCTAGTAGAAGTGATGCGAAGAAATTTGGA
AAAAGAAAATGTGAGGGGAAGGGGGGGAGGAAGGGGGGTTGGGAGTAAGG
TTTATGCGACGGTAGAGGAGGCGGTGGAGGCAAGGTTGAGCACCGTGGGA
AGGCTCCCAGGGACGCAAACACTCGAGCCGTCTTCTGCCGCCATATTGGT
CGGTAGAGGAGCAGGGCCTGCAGATGCACCACATGCCAATGACTTGGTCT
GGGGACATGATGGGAATGATGGAGGGGTACGGTTTCGGCATGACCAGCGG
TTGGCGGCGTCGGCGCACATTTACTTGACGGAAGAACAGTCGCGCGCGTT
TTTGGCCGCAAGTCGTTGTCCCGTGTTATTGTTACGAGGGGCCGAGGGGT
GGCCGGCAGCGTCGCCAGAGGAAGAGATTATGAGAGAGGCGGCGTTGGGA
AATAGGTTGACGATGTTGAAGGTCCCGGGAAGTCACCATCTGCATTTGGA
TGAGAGCACATGCACGGAGGAGAGGGTGGTGAAGCCCGTGGTGGCATTTT
TGGTGGAGGGAGCGCGAGGCTTCACGTAGAGCTTCTCATCCCCCTTCCCG
ATGGCCTCGTTGTCGCAGCCAAAGCCTGGGGTCCTGCCAATGGGCCTCCC
GTTCTAGCTCTGCACGGATGGTTGGACAACGCAAACACATTCGATCGTCT
TGCCCCCCCTCTGGCTGCGGCGGGCCTAAGGGTTATGTGCATTGACTTTC
CGGGGCATGGCAAATCGGCGCATCGATCACCGGATGCCGTATACGCCTTC
ACAGACTACGTGTACTACGTTTGGGCGTTGGCCAAACAATTGAAGTGGAA
AATGGCTTTATCCTCGTCCCGTGTCTTCTCGTTTCTTGGCGTCGGTGCTG
CGCTCCTCGCATTTCCTGAAATTCCAAATTCTCGGCCACTCGCTCGGCGC
AGGCATTGGTCTGGCACTTGCAGGCACCTACCCCGAAATGGTCGAGCGTA
TGGTGTGCATAGAGACCCTAGGTATTATCAGCAAGCCCGCCGAGAGCGCC
CCCACCACATTACGGGAAGCAATCAGACAACGGGCGACCCTAGTAGAAGT
GATGCGAAGAAATTTGGAAAAAGAAAATGTGAGGGGAAGGGGGGGAGGAA
GGGGGGTTGGGAGTAAGGTTTATGCGACGGTAGAGGAGGCGGTGGAGGCA
AGGTTGAGCACCGTGGGAAGGCTCCCAGGGACGCAAACACTCGAGCCGTC
TTCTGCCGCCATATTGGTCGGTAGAGGAGCAGGGCCTGCAGATGCACCAC
ATGCCAATGACTTGGTCTGGGGACATGATGGGAATGATGGAGGGGTACGG
TTTCGGCATGACCAGCGGTTGGCGGCGTCGGCGCACATTTACTTGACGGA
AGAACAGTCGCGCGCGTTTTTGGCCGCAAGTCGTTGTCCCGTGTTATTGT
TACGAGGGGCCGAGGGGTGGCCGGCAGCGTCGCCAGAGGAAGAGATTATG
AGAGAGGCGGCGTTGGGAAATAGGTTGACGATGTTGAAGGTCCCGGGAAG
TCACCATCTGCATTTGGATGAGAGCACATGCACGGAGGAGAGGGTGGTGA
AGCCCGTGGTGGCATTTTTGGTGGAGGGAGCGCGAGGCTTCACGTAGAGC
TTCTCATCCCCCTTCCCGATGGCCTCGTTGTCGCAGCCAAAGCCTGGGGT
CCTGCCAATGGGCCTCCCGTTCTAGCTCTGCACGGATGGTTGGACAACGC
AAACACATTCGATCGTCTTGCCCCCCCTCTGGCTGCGGCGGGCCTAAGGG
TTATGTGCATTGACTTTCCGGGGCATGGCAAATCGGCGCATCGATCACCG
GATGCCGTATACGCCTTCACAGACTACGTGTACTACGTTTGGGCGTTGGC
CAAACAATTGAAGTGGAAAATGGCTTTATCCTCGTCCCGTGTCTTCTCGT
TTCTTGGCGTCGGTGCTGCGCTCCTCGCATTTCCTGAAATTCCAAATTCT
CGGCCACTCGCTCGGCGCAGGCATTGGTCTGGCACTTGCAGGCACCTACC
CCGAAATGGTCGAGCGTATGGTGTGCATAGAGACCCTAGGTATTATCAGC
AAGCCCGCCGAGAGCGCCCCCACCACATTACGGGAAGCAATCAGACAACG
GGCGACCCTAGTAGAAGTGATGCGAAGAAATTTGGAAAAAGAAAATGTGA
GGGGAAGGGGGGGAGGAAGGGGGGTTGGGAGTAAGGTTTATGCGACGGTA
GAGGAGGCGGTGGAGGCAAGGTTGAGCACCGTGGGAAGGCTCCCAGGGAC
GCAAACACTCGAGCCGTCTTCTGCCGCCATATTGGTCGGTAGAGGAGCAG
GGCCTGCAGATGCACCACATGCCAATGACTTGGTCTGGGGACATGATGGG
AATGATGGAGGGGTACGGTTTCGGCATGACCAGCGGTTGGCGGCGTCGGC
GCACATTTACTTGACGGAAGAACAGTCGCGCGCGTTTTTGGCCGCAAGTC
GTTGTCCCGTGTTATTGTTACGAGGGGCCGAGGGGTGGCCGGCAGCGTCG
CCAGAGGAAGAGATTATGAGAGAGGCGGCGTTGGGAAATAGGTTGACGAT
GTTGAAGGTCCCGGGAAGTCACCATCTGCATTTGGATGAGAGCACATGCA
CGGAGGAGAGGGTGGTGAAGCCCGTGGTGGCATTTTTGGTGGAGGGAGCG
CGAGGCTTCACGTAGAGCTTCTCATCCCCCTTCCCGATGGCCTCGTTGTC
GCAGCCAAAGCCTGGGGTCCTGCCAATGGGCCTCCCGTTCTAGCTCTGCA
CGGATGGTTGGACAACGCAAACACATTCGATCGTCTTGCCCCCCCTCTGG
CTGCGGCGGGCCTAAGGGTTATGTGCATTGACTTTCCGGGGCATGGCAAA
TCGGCGCATCGATCACCGGATGCCGTATACGCCTTCACAGACTACGTGTA
CTACGTTTGGGCGTTGGCCAAACAATTGAAGTGGAAAATGGCTTTATCCT
CGTCCCGTGTCTTCTCGTTTCTTGGCGTCGGTGCTGCGCTCCTCGCATTT
CCTG back to top
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