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Properties
| Property Name | Value |
|---|
| TranscriptId | 611914 |
| Track | FilteredModels2 |
| ProteinId | 611828 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_59 | supercontig | scaffold_59:34897..37869 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10786 ID=mRNA_10786|Name=jgi.p|Nanoce1779_2|611828|organism=Nannochloropsis oceanica|type=mRNA|length=2456bp
ACAGCACCCACTCTCTCCGATAACAACCATGAAGTTGACCGTATCCTCCG
TCCTCCTCGCCGGCGTCGCCCTCTTGTCCGCCATGTCCGCTGTTAGCGGC
AGCGGCCACGTCCAAACCGGCGCCAAGTCCGTGCTCGTGAAAAAGGGTAG
AATCGTGACTGTCACCCAGAGGTTTGTAGCCCAGAGCTTCAACGTTGGTC
GTCGTCTTGTTGATGTTCAGGAGCCTGTCATGGCTGGGCTCACGACTGAC
CCTGAGGGGGAGTTTGACTTCGGCTTCGGCCCCTTCTCCTCTACCAACAA
AACCAAACGCAACAAGACGGCCAAAAGCAAGACGGACAAATGGGCGGACG
ACGTCGGAATCACCATCAAGTCGGCCAAGATCCTCCCCAATACGTGGAAG
CCTAAGGTGTCTGCGAACATGACCTCGACCGTCGATGGTGACTACGCCAT
CTTCGAGCTCCCGCAGGACGGCCTGGACCTGAACAGGGAGTACAAGATCG
TCTACAAGGTGCGCGTTGGGAGGGGCATCCCCTCTGGTTCCTTCATCGAG
CTTCCGTATAATTTCGATGGTATCTCCTTTGGAGACGACTTTGCTGTGAC
TGTTATTGTCAAGTAATCAAATGTCTTGGCCTGGCTCCGCTCCCTTGTGG
AAAAATGAGGGTCGAGATGCATGTGTTGCGATCATGATGAAAAATGGTGG
CGTGGCTTTTTTTCGTACATATATGTGTGTAAATCTGTTGTGATGTACAT
GCGTACATCTATCCGTGCGCGGCGTGATCCCTGCTTCGCGTCAGATGTTG
TACGTTTCGCTGTGTGTCATGTGTTTGTGTTTGTGTCTGTCTACGTGTAA
TTGTGTGTGTTGGCGTGTAGGTGTGGATGTTTCCTCTTTCAAAGGGAAAT
ATTATAAGAAAGACAAAAAGCTACAACACCTGAGTGGCAATCCATTTTTT
TGTTTGGTGGACATAGCCTCAATACGGTGGGGGGTCACGATCCTTGTTTT
TTTAAACACATGACGTTCCCATCGCTGTTGTTGATGCCCTGCTGTTGCAC
CGGCAAGATCACCTTTCTAATTTTCTTTCTTCTCTTCCTTGTCGTGTGTG
CAGACATTCAAAGAGTCAATACACACAGTCAGATGGTTAAATCAATATAA
ATGATTTAAAAATGAATATATGGTAAAGTAGGCGAAGTAGGGGATGAGGA
GAGTATGAGGAAAATGAACTAGGGCGAGGACAGATCCTTCCGCTACAGAT
TTATGGTCATATAATGTTTGTGTTGGTCTCGTCTTGTTGGATATGTCAGG
GGATTGGCACGGGACCTTTGAGGGACAGTACACTACGTTTTCTCAGAATG
AGTATTGATATTTTGGACTCGCAAATGGTTATTGATGACCCGTTTAGATG
TTTTGGTAATTCAAGAGGCTTAACCATTGTCACTATCGAACTCACAAAAG
ATTCAATCAATCAATCAATCCACTTTTTCAGCCTATACAACTCATTCTGG
CACATTTCGTGTGTCATTGACGACTTTAAAGTAATATCTTCACTGTAGGG
TTCCAAAGATTCCTCGAGGCATCGATTTCGGACCCTCTGACGCTCTCGCG
GTGGGGTAGCCCTGCATGGGCTGGATTCTTTCTTCCACTAAGAGCTCACT
TGCCATGCTTTACACTTCCTGTCCTTCCTCCAACAGCTTGAGGCCTATCA
AAGCAATTGATTTCTTTCTCTCGGATGCCTTTAGTCTGTCCCTTCTTTTC
TCTTTTCTTTCCCCCCCCTTCTGTCTCCTCTGCTTTCTCCGTTCAAGAAG
CATCGCCCTACTTCACTCAAGCACGCAAGCGACGCCGATCTCTGTGCAAT
TCCACTGCACACATCCTTCGTCATCGCCTCTACCTTCCCTTCTTCCTTAC
GTCTCTTCCACATTCCCCCCTCCTTTCTTCACGTGCATCCAAGTGCACGT
CCTTGTTGCCGTACACTCTACATACGCATATACAGCTACACGTGCAAGTC
ACAAGCAGTACGCAGAATGTTGTTACTTTCGTTCACATCTCCCTGTTTCA
CCGGCTGTCTTCCCCCTTCTTGATTTTCTAGGCCATTTCCGCATTTTCCT
CTTGTTGCTTTCTGTCTCATTCTGTCCTCTCTTTACCTCTCTTTTCTTCT
CGTTGCTTCCCTTCTCTTTGCTTCACTTCTATACTCCCTTTTCCCTCTCC
TACCGGTCGTCCCCGAGAATGTTTTGGGCACTCAATTGCTTCAACCCGGC
TACAGCCCCCTGGAAACCTATGGAGGGATTCGGGAGGGAGAGAGGGAGAG
AGGGAGGTCGGAAGAAATGAGAGCTCTGGGAAGGAGTAGGAGTAGGATAT
ACGGTGGTGTCCGTGACTTACCAGCACTGTAGTCCAGGGCAACCTCGTTC
CTGTCGTTTTATCGTGTGCATATGTATAAATAAATATTTTGGTAGAAACA
ATCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|611828 >mRNA_10786-protein ID=mRNA_10786-protein|Name=jgi.p|Nanoce1779_2|611828|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MGWILSSTKSSLAMLYTSCPSSNSLRPIKAIDFFLSDAFSLSLLFSFLSP
PFCLLCFLRSRSIALLHSSTQATPISVQFHCTHPSSSPLPSLLPYVSSTF
PPPFFTCIQVHVLVAVHSTYAYTATRASHKQYAECCYFRSHLPVSPAVFP
LLDFLGHFRIFLLLLSVSFCPLFTSLFFSLLPFSLLHFYTPFSLSYRSSP
RMFWALNCFNPATAPWKPMEGFGRERGREGGRKK* back to topmRNA from alignment at scaffold_59:34897..37869- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10786 ID=mRNA_10786|Name=jgi.p|Nanoce1779_2|611828|organism=Nannochloropsis oceanica|type=mRNA|length=2973bp|location=Sequence derived from alignment at scaffold_59:34897..37869- (Nannochloropsis oceanica)
ACAGCACCCACTCTCTCCGATAACAACCATGAAGTTGACCGTATCCTCCG
TCCTCCTCGCCGGCGTCGCCCTCTTGTCCGCCATGGTGCGTTCTGACACA
CCCATTTATCCATGCACGGATGCAAGTGTCTATCCTACAAATCGATGTCG
TGTTCACATTCTGTTATGTCACGCTCTTCCTCTCTTTCTTGCTCTATCTT
CCCCCCCCCCCCTTTATGACACAGTCCGCTGTTAGCGGCAGCGGCCACGT
CCAAACCGGCGCCAAGTCCGTGCTCGTGAAAAAGGGTAGAATCGTGACTG
TCACCCAGAGGTTTGTAGCCCAGAGCTTCAACGTTGGTCGTCGTCTTGTT
GATGTTCAGGAGCCTGTCATGGCTGGGGTACGTTGCAAAAAGAGGGCAGT
CGAGGGGTGGGGGGGGGGGAAGGGCTTGCCCTCGCAGAATTTGTGCCGGA
CCTGTTGGCATACTCACAGACGTGCGATCAGATCGATACATTCGCTATCT
CGCCGCCTGAATGAACAAACATTACCATTTCTCATTCCTTCCTTTGCTTC
CTGCTTTCCCTCCCACCACTCGCTGTCTCCATCCATCTACTTCTCCACAG
CTCACGACTGACCCTGAGGGGGAGTTTGACTTCGGCTTCGGCCCCTTCTC
CTCTACCAACAAAACCAAACGCAACAAGACGGCCAAAAGCAAGACGGACA
AATGGGCGGACGACGTCGGAATCACCATCAAGTCGGCCAAGATCCTCCCC
AATACGTGGAAGCCTAAGTGAGTGAAACAGGCGGAAGGGGAGGGAAGAGT
GGGGTTGGAGGGAGGAAGCGGGAGTTCGTAAAACGTATAATTTCTCCTCG
GTTTGCCCTGCTCTGATTCTCAAAGCCTCTTTCCCTCTCCTTCTCCCCTC
TCCCTTGTCTTGTCTCCCACAGGGTGTCTGCGAACATGACCTCGACCGTC
GATGGTGACTACGCCATCTTCGAGCTCCCGCAGGACGGCCTGGACCTGAA
CAGGGAGTACAAGATCGTCTACAAGGTGCGCGTTGGGAGGGGCATCCCCT
CTGGTTCCTTCATCGAGCTTCCGTATAATTTCGATGGTATCTCCTTTGGA
GACGACTTTGCTGTGACTGTTATTGTCAAGTAATCAAATGTCTTGGCCTG
GCTCCGCTCCCTTGTGGAAAAATGAGGGTCGAGATGCATGTGTTGCGATC
ATGATGAAAAATGGTGGCGTGGCTTTTTTTCGTACATATATGTGTGTAAA
TCTGTTGTGATGTACATGCGTACATCTATCCGTGCGCGGCGTGATCCCTG
CTTCGCGTCAGATGTTGTACGTTTCGCTGTGTGTCATGTGTTTGTGTTTG
TGTCTGTCTACGTGTAATTGTGTGTGTTGGCGTGTAGGTGTGGATGTTTC
CTCTTTCAAAGGGAAATATTATAAGAAAGACAAAAAGCTACAACACCTGA
GTGGCAATCCATTTTTTTGTTTGGTGGACATAGCCTCAATACGGTGGGGG
GTCACGATCCTTGTTTTTTTAAACACATGACGTTCCCATCGCTGTTGTTG
ATGCCCTGCTGTTGCACCGGCAAGATCACCTTTCTAATTTTCTTTCTTCT
CTTCCTTGTCGTGTGTGCAGACATTCAAAGAGTCAATACACACAGTCAGA
TGGTTAAATCAATATAAATGATTTAAAAATGAATATATGGTAAAGTAGGC
GAAGTAGGGGATGAGGAGAGTATGAGGAAAATGAACTAGGGCGAGGACAG
ATCCTTCCGCTACAGATTTATGGTCATATAATGTTTGTGTTGGTCTCGTC
TTGTTGGATATGTCAGGGGATTGGCACGGGACCTTTGAGGGACAGTACAC
TACGTTTTCTCAGAATGAGTATTGATATTTTGGACTCGCAAATGGTTATT
GATGACCCGTTTAGATGTTTTGGTAATTCAAGAGGCTTAACCATTGTCAC
TATCGAACTCACAAAAGATTCAATCAATCAATCAATCCACTTTTTCAGCC
TATACAACTCATTCTGGCACATTTCGTGTGTCATTGACGACTTTAAAGTA
ATATCTTCACTGTAGGGTTCCAAAGATTCCTCGAGGCATCGATTTCGGAC
CCTCTGACGCTCTCGCGGTGGGGTAGCCCTGCATGGGCTGGATTCTTTCT
TCCACTAAGAGCTCACTTGCCATGCTTTACACTTCCTGTCCTTCCTCCAA
CAGCTTGAGGCCTATCAAAGCAATTGATTTCTTTCTCTCGGATGCCTTTA
GTCTGTCCCTTCTTTTCTCTTTTCTTTCCCCCCCCTTCTGTCTCCTCTGC
TTTCTCCGTTCAAGAAGCATCGCCCTACTTCACTCAAGCACGCAAGCGAC
GCCGATCTCTGTGCAATTCCACTGCACACATCCTTCGTCATCGCCTCTAC
CTTCCCTTCTTCCTTACGTCTCTTCCACATTCCCCCCTCCTTTCTTCACG
TGCATCCAAGTGCACGTCCTTGTTGCCGTACACTCTACATACGCATATAC
AGCTACACGTGCAAGTCACAAGCAGTACGCAGAATGTTGTTACTTTCGTT
CACATCTCCCTGTTTCACCGGCTGTCTTCCCCCTTCTTGATTTTCTAGGC
CATTTCCGCATTTTCCTCTTGTTGCTTTCTGTCTCATTCTGTCCTCTCTT
TACCTCTCTTTTCTTCTCGTTGCTTCCCTTCTCTTTGCTTCACTTCTATA
CTCCCTTTTCCCTCTCCTACCGGTCGTCCCCGAGAATGTTTTGGGCACTC
AATTGCTTCAACCCGGCTACAGCCCCCTGGAAACCTATGGAGGGATTCGG
GAGGGAGAGAGGGAGAGAGGGAGGTCGGAAGAAATGAGAGCTCTGGGAAG
GAGTAGGAGTAGGATATACGGTGGTGTCCGTGACTTACCAGCACTGTAGT
CCAGGGCAACCTCGTTCCTGTCGTTTTATCGTGTGCATATGTATAAATAA
ATATTTTGGTAGAAACAATCAAA back to topCoding sequence (CDS) from alignment at scaffold_59:34897..37869- >mRNA_10786 ID=mRNA_10786|Name=jgi.p|Nanoce1779_2|611828|organism=Nannochloropsis oceanica|type=CDS|length=705bp|location=Sequence derived from alignment at scaffold_59:34897..37869- (Nannochloropsis oceanica)
ATGGGCTGGATTCTTTCTTCCACTAAGAGCTCACTTGCCATGCTTTACAC
TTCCTGTCCTTCCTCCAACAGCTTGAGGCCTATCAAAGCAATTGATTTCT
TTCTCTCGGATGCCTTTAGTCTGTCCCTTCTTTTCTCTTTTCTTTCCCCC
CCCTTCTGTCTCCTCTGCTTTCTCCGTTCAAGAAGCATCGCCCTACTTCA
CTCAAGCACGCAAGCGACGCCGATCTCTGTGCAATTCCACTGCACACATC
CTTCGTCATCGCCTCTACCTTCCCTTCTTCCTTACGTCTCTTCCACATTC
CCCCCTCCTTTCTTCACGTGCATCCAAGTGCACGTCCTTGTTGCCGTACA
CTCTACATACGCATATACAGCTACACGTGCAAGTCACAAGCAGTACGCAG
AATGTTGTTACTTTCGTTCACATCTCCCTGTTTCACCGGCTGTCTTCCCC
CTTCTTGATTTTCTAGGCCATTTCCGCATTTTCCTCTTGTTGCTTTCTGT
CTCATTCTGTCCTCTCTTTACCTCTCTTTTCTTCTCGTTGCTTCCCTTCT
CTTTGCTTCACTTCTATACTCCCTTTTCCCTCTCCTACCGGTCGTCCCCG
AGAATGTTTTGGGCACTCAATTGCTTCAACCCGGCTACAGCCCCCTGGAA
ACCTATGGAGGGATTCGGGAGGGAGAGAGGGAGAGAGGGAGGTCGGAAGA
AATGA back to top
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