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Properties
| Property Name | Value |
|---|
| TranscriptId | 356416 |
| Track | FilteredModels2 |
| ProteinId | 356330 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_59 | supercontig | scaffold_59:23272..24422 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10782 ID=mRNA_10782|Name=jgi.p|Nanoce1779_2|356330|organism=Nannochloropsis oceanica|type=mRNA|length=739bp
CCCTCCCTCCCTCACTCCCTCCCTTAGGCGTTATCGTTCCTTACAAAGCC
CAGGCGTTACGGATCAAGCATTTGATGAAGGCAAAAGGCCTTCTCTCTCC
CAATAAGGCAGGCGCTGCCTGTGCACACGTCAAAGTCTCCACTGTCGACG
CCTTCCAGGGCGCAGAGAGGGAGGTCATCATCTACTCCTCCGTCCGCACC
GCCGGTTTAGGTTTCCTCGACAGCCCCAAAAGGCTGAACGTGGCTATCAC
CCGTGCCCGACGTCATCTCATTCTTGTGGGCAACGCCCAGGCCCTTGCCA
TGCTCTCTGCCGCTGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGGCGG
GGAGGAGGACATCGGGGCATGTACGTGCTCAAGTTTTGTATTGCAATTTC
CTTCCTTTCTCCCTCCCGCCTGCTCTCCCTCCTTTCTGTCCCCTTTCCCT
CGTCTCCTTTGGTTCCCACAATTCGTCTCCTTTTGCTGCAACGTTCGGTT
CTTTGTGAAGTCTCTCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCT
TCCCTTGACAGGTGGGGTGAGATCGTGCGTCGCGCCGTCCACTGCTCGCA
CGTCCAGGAGCTGGCCGGGTGGTTGACAGAGGAATGATGGAGAGGAGGGG
GAGGGAAGGAGGGGAGGAGGGAGGGAGGGAGGATAGAAACGAGGGCGGGG
AAAATGTCCAAAATAGTGGACTATTTGTCGAGAGCGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|356330 >mRNA_10782-protein ID=mRNA_10782-protein|Name=jgi.p|Nanoce1779_2|356330|organism=Nannochloropsis oceanica|type=polypeptide|length=184bp
MKAKGLLSPNKAGAACAHVKVSTVDAFQGAEREVIIYSSVRTAGLGFLDS
PKRLNVAITRARRHLILVGNAQALAMLSAAGGGGGGGGGGGRGGGHRGMY
VLKFCIAISFLSPSRLLSLLSVPFPSSPLVPTIRLLLLQRSVLCEVSPPL
PPSLPPSFLPLTGGVRSCVAPSTARTSRSWPGG* back to topmRNA from alignment at scaffold_59:23272..24422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10782 ID=mRNA_10782|Name=jgi.p|Nanoce1779_2|356330|organism=Nannochloropsis oceanica|type=mRNA|length=1151bp|location=Sequence derived from alignment at scaffold_59:23272..24422- (Nannochloropsis oceanica)
CCCTCCCTCCCTCACTCCCTCCCTTAGGCGTTATCGTTCCTTACAAAGCC
CAGGCGTTACGGATCAAGCATTTGATGAAGGTGAGGGAAGGAGGGAAGGA
GGGAGGGAGCGAGTGAGCGAAAGAGTACCTCGAAAAAAAATAAGACTAAC
GACGCCTATCACCTACCCCTCCCTCCCTGCATTCTTTCCTCCTCCCCTCC
CTCCCTCCCTCCCTCCCTCAGGGCAAGACCCCCTCTCCCCTCCCATTAAA
CGTGTGTGTGACATTCACCTCTCCCTCCCTCCCTCCCTCCATCCCCTCCT
CCCTCCATCCCTCCCTCCCTCCCTTCCCTTGCAGGCAAAAGGCCTTCTCT
CTCCCAATAAGGCAGGCGCTGCCTGTGCACACGTCAAAGTCTCCACTGTC
GACGCCTTCCAGGGCGCAGAGAGGGAGGTCATCATCTACTCCTCCGTCCG
CACCGCCGGTTTAGGTTTCCTCGACAGCCCCAAAAGGTGCAGCCCTTCCT
CCCTCCCTTTGTCCCTCCCACCTCCCCTCCCTTCTTTCCCCTTGACGATC
ATTTCCTAACCTTTTCCCCTCCCTCCCTCCCTTCCCCTTGACGATCATTT
CCTAACCTTTTCCCCTCCCTCTCTCTTTCTCTCCCTCCCTCCAGGCTGAA
CGTGGCTATCACCCGTGCCCGACGTCATCTCATTCTTGTGGGCAACGCCC
AGGCCCTTGCCATGCTCTCTGCCGCTGGAGGAGGAGGAGGAGGAGGAGGG
GGAGGAGGGCGGGGAGGAGGACATCGGGGCATGTACGTGCTCAAGTTTTG
TATTGCAATTTCCTTCCTTTCTCCCTCCCGCCTGCTCTCCCTCCTTTCTG
TCCCCTTTCCCTCGTCTCCTTTGGTTCCCACAATTCGTCTCCTTTTGCTG
CAACGTTCGGTTCTTTGTGAAGTCTCTCCTCCCCTCCCTCCCTCCCTCCC
TCCCTCCTTCCTTCCCTTGACAGGTGGGGTGAGATCGTGCGTCGCGCCGT
CCACTGCTCGCACGTCCAGGAGCTGGCCGGGTGGTTGACAGAGGAATGAT
GGAGAGGAGGGGGAGGGAAGGAGGGGAGGAGGGAGGGAGGGAGGATAGAA
ACGAGGGCGGGGAAAATGTCCAAAATAGTGGACTATTTGTCGAGAGCGAG
G back to topCoding sequence (CDS) from alignment at scaffold_59:23272..24422- >mRNA_10782 ID=mRNA_10782|Name=jgi.p|Nanoce1779_2|356330|organism=Nannochloropsis oceanica|type=CDS|length=1656bp|location=Sequence derived from alignment at scaffold_59:23272..24422- (Nannochloropsis oceanica)
GCTGAACGTGGCTATCACCCGTGCCCGACGTCATCTCATTCTTGTGGGCA
ACGCCCAGGCCCTTGCCATGCTCTCTGCCGCTGGAGGAGGAGGAGGAGGA
GGAGGGGGAGGAGGGCGGGGAGGAGGACATCGGGGCATGTACGTGCTCAA
GTTTTGTATTGCAATTTCCTTCCTTTCTCCCTCCCGCCTGCTCTCCCTCC
TTTCTGTCCCCTTTCCCTCGTCTCCTTTGGTTCCCACAATTCGTCTCCTT
TTGCTGCAACGTTCGGTTCTTTGTGAAGTCTCTCCTCCCCTCCCTCCCTC
CCTCCCTCCCTCCTTCCTTCCCTTGACAGGTGGGGTGAGATCGTGCGTCG
CGCCGTCCACTGCTCGCACGTCCAGGAGCTGGCCGGGTGGTTGAGCAAAA
GGCCTTCTCTCTCCCAATAAGGCAGGCGCTGCCTGTGCACACGTCAAAGT
CTCCACTGTCGACGCCTTCCAGGGCGCAGAGAGGGAGGTCATCATCTACT
CCTCCGTCCGCACCGCCGGTTTAGGTTTCCTCGACAGCCCCAAAAGATGA
AGGCTGAACGTGGCTATCACCCGTGCCCGACGTCATCTCATTCTTGTGGG
CAACGCCCAGGCCCTTGCCATGCTCTCTGCCGCTGGAGGAGGAGGAGGAG
GAGGAGGGGGAGGAGGGCGGGGAGGAGGACATCGGGGCATGTACGTGCTC
AAGTTTTGTATTGCAATTTCCTTCCTTTCTCCCTCCCGCCTGCTCTCCCT
CCTTTCTGTCCCCTTTCCCTCGTCTCCTTTGGTTCCCACAATTCGTCTCC
TTTTGCTGCAACGTTCGGTTCTTTGTGAAGTCTCTCCTCCCCTCCCTCCC
TCCCTCCCTCCCTCCTTCCTTCCCTTGACAGGTGGGGTGAGATCGTGCGT
CGCGCCGTCCACTGCTCGCACGTCCAGGAGCTGGCCGGGTGGTTGAGCAA
AAGGCCTTCTCTCTCCCAATAAGGCAGGCGCTGCCTGTGCACACGTCAAA
GTCTCCACTGTCGACGCCTTCCAGGGCGCAGAGAGGGAGGTCATCATCTA
CTCCTCCGTCCGCACCGCCGGTTTAGGTTTCCTCGACAGCCCCAAAAGAT
GAAGGCTGAACGTGGCTATCACCCGTGCCCGACGTCATCTCATTCTTGTG
GGCAACGCCCAGGCCCTTGCCATGCTCTCTGCCGCTGGAGGAGGAGGAGG
AGGAGGAGGGGGAGGAGGGCGGGGAGGAGGACATCGGGGCATGTACGTGC
TCAAGTTTTGTATTGCAATTTCCTTCCTTTCTCCCTCCCGCCTGCTCTCC
CTCCTTTCTGTCCCCTTTCCCTCGTCTCCTTTGGTTCCCACAATTCGTCT
CCTTTTGCTGCAACGTTCGGTTCTTTGTGAAGTCTCTCCTCCCCTCCCTC
CCTCCCTCCCTCCCTCCTTCCTTCCCTTGACAGGTGGGGTGAGATCGTGC
GTCGCGCCGTCCACTGCTCGCACGTCCAGGAGCTGGCCGGGTGGTTGAGC
AAAAGGCCTTCTCTCTCCCAATAAGGCAGGCGCTGCCTGTGCACACGTCA
AAGTCTCCACTGTCGACGCCTTCCAGGGCGCAGAGAGGGAGGTCATCATC
TACTCCTCCGTCCGCACCGCCGGTTTAGGTTTCCTCGACAGCCCCAAAAG
ATGAAG back to top
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