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Properties
Property Name | Value |
TranscriptId | 356366 |
Track | FilteredModels2 |
ProteinId | 356280 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_59 | supercontig | scaffold_59:19403..21938 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10781 ID=mRNA_10781|Name=jgi.p|Nanoce1779_2|356280|organism=Nannochloropsis oceanica|type=mRNA|length=974bp GACGGGACCATTCCTGGCATTGCCTTGGTGACCGGGTTGCGACTAAACAC AGTACATGACAATGGCACGCTCAATACCGGCGGTGGCTGCGGCTGCCTGC CTGCTTGTCAGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGCCTCCACCCC CTCCTCGTCCCGACTTTATTCTGCTGATGGCATGGCGCTGGCCTCCGGAG GTCTCCGGCCATCTACCCTCGATCTTAGCCAGATGACGGTTCACGCTGGG CAAGACGCATTGTTGAAATTTCAGGAGAAGCGCAAGGCGGCCGCCATCAT TTCTGACGCGGAGCATGAGCCTGTCGAGCACACGATGAAGCGCTTCAACA ACTTGTACGGCCGCCCTGTCATCCCCTTCTACCGCACTACACTCTACGAG CTCGTCCAGACGGGTCACTTGGCCGTGACGGACGCCTCCTTCATGTACAC ACACTTCTTCGCTTTCGGCTTCCTCTATGCCTTCGAGACCGTTTTCAAAG GATATCCTGTTCCCAACGAGTGGGAGGCGCTCTTCGAGGCAGCGGCCAAG AGCGCCAAGCTGGATCCAGCGAAGCTCCGAGCGGACGCGGAGGCTCTCAA GACGTATATGGCCAGTGGCAAGACACAGAATGACTTTGTCCGCGCCATCG ACAGCCCGAATGAATCCGACCCCATCGAGAAGGAGATCGCCGCCATTGCC AAAGCTAACACTTTCCTGCCCGAGCGTTACTTCTCGTTTGGCCTGTGCAA AACGATGGAGGCCGTCGGCGTCGAGGTGAACTGGGATTCGATCAAAGTTT GGTGCGGAAAGCTTAATATGGACGAATCCCGCACGCAACTCGATTGGGAT CTGCTGGAGCGGTACGTATGAAAGCCTCCCTCCCTTCCTCTGACCCTCCC TCCCTCCCTCCTTCCCTCCCTCCCTCCCGTTCTCTTGGCTCCAGGGGTCG ATGGCTGGACGCGGCCTATCCCAC back to topprotein sequence of jgi.p|Nanoce1779_2|356280 >mRNA_10781-protein ID=mRNA_10781-protein|Name=jgi.p|Nanoce1779_2|356280|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp MTMARSIPAVAAAACLLVSGASAFLLPFASTPSSSRLYSADGMALASGGL RPSTLDLSQMTVHAGQDALLKFQEKRKAAAIISDAEHEPVEHTMKRFNNL YGRPVIPFYRTTLYELVQTGHLAVTDASFMYTHFFAFGFLYAFETVFKGY PVPNEWEALFEAAAKSAKLDPAKLRADAEALKTYMASGKTQNDFVRAIDS PNESDPIEKEIAAIAKANTFLPERYFSFGLCKTMEAVGVEVNWDSIKVWC GKLNMDESRTQLDWDLLERYV* back to topmRNA from alignment at scaffold_59:19403..21938+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10781 ID=mRNA_10781|Name=jgi.p|Nanoce1779_2|356280|organism=Nannochloropsis oceanica|type=mRNA|length=2536bp|location=Sequence derived from alignment at scaffold_59:19403..21938+ (Nannochloropsis oceanica) GACGGGACCATTCCTGGCATTGCCTTGGTGACCGGGTTGCGACTAAGTTC
TGTCCGGGGCATCCACATCAGCATCGTGGAGGGAGCCACAGCACGCCAAA
ATGACGGACAAGCCTGTTTGCCCTTACGACCATACATCCAGCATCATCAC
CCCACTCTTCTAATTCTCGTCTCTTTCACCCACACAGACACAGTACATGA
CAATGGCACGCTCAATACCGGCGGTGGCTGCGGCTGCCTGCCTGCTTGTC
AGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGCCTCCACCCCCTCCTCGTC
CCGGTACGTGTAGCCGAGATCTATCCACATTCTGTGTAATGTGAACATTT
TTTCGATGGTGTACGTGCAGGTAGCATGTGCTCGTGCCGCGGCGTGTCCA
CCCAATAGCCTCGATACTTTTTCCCACTTGACCCTAACATATCGCAACCT
GCTACCTCCCGGCGTCCTGCGTCGCTCGCCCCTCTCACCTTTCGTAATCC
TATTTCCCAATTTAATCTACACATGCAGACTTTATTCTGCTGATGGCATG
GCGCTGGCCTCCGGAGGTCTCCGGCCATCTACCCTCGATCTTAGCCAGAT
GACGGTACGTCCTCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTC
CCTCCCTCCCTCCCTCCCACTCAAACACCCCCTCCCTTCCATCGGCATCA
CCAATGACTAACAGGTTCACGCTGGGCAAGACGCATTGTTGAAATTTCAG
GAGAAGCGCAAGGCGGCCGCCATCATTTCTGGTGCGTGTGGGTGGAGGAA
GAAGAGGAGGGAGAAAGGGAGGGGATGATGATATGCCGCATGGGCGTCAC
TATGTGCGTTGTCCGTGTAACCTACTGGTTAATTGACATAATACAATCTA
TCATCTTACCCTTCCCCCCCTCCCCCCCTCTCTCTCCATGCCACACTCCA
GACGCGGAGCATGAGCCTGTCGAGCACACGATGAAGCGCTTCAACAACTT
GTACGGCCGCCCTGTCATCCCCTTCTACCGCACTACACTCTACGAGCTCG
TCCAGGTACGCGTGCCTGTCCTCCCTCCCTCCCTCCCTGCCTCCCTCCTT
CCCCCTCCTCCTTCCTCTTCTTCCTCTTCTACTTGCTCCATGAGCCTTTG
ACTGGTCCCTCCCTCCCTCTTTCCCTCCCTCCCTCTCTCCCTTCCTCCCT
CCCTCCTCCCTCCTCCCTCCATGATCGTTCGACTCACTCCTCCCCCCCAT
CCCTCCCTCTTCAGACGGGTCACTTGGCCGTGACGGACGCCTCCTTCATG
TACACACACTTCTTCGCTTTCGGCTTCCTCTATGCCTTCGAGACCGTTTT
CAAAGGATATCCTGTTCCCAACGAGTGGGAGGCGCTCTTCGAGGCAGCGG
TACGTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCCCCCCCTCCCTTCCT
CCCTCCTTATCTCCGAGGCACACCCCCACCTCCCACCTCTCTTTCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTTCCCCAGGCCAAGAGCGCCAAGCTGGATCCAGCGAAGCT
CCGAGCGGACGCGGAGGCTCTCAAGACGTATATGGCCAGTGGCAAGACAC
AGAATGACTTTGTCCGCGCCATCGACAGCCCGAATGAATGTAAGCAAGCC
TTTCCTCCCTCCCACCCTCCCTCCCTCCCTCCCTCCTTCCCTCTCTTTCT
TTCTTTCGGCCTGCCCCCCTGTGCGCGTGCGCGCGGGGTGGAAGGGCGAC
CTTCTCTCCCTCCTTCTCTCCCTCCCTCCTTCTCTCCCTCCCTCCTTCTC
TCCTACCTTCTCTCCTACCTTCTCTCCCTCCTTCTCTCCCTCCTTCCCTC
CTCTTTCCTTCTCTCCTTCTCTCCCTCCCTTCCCCTTTTCCTCCCTCCCT
TTCTCTTTCCCAATTGTGTCTCTCTTGTCGAGCCTATTGCTCCAATGCTC
GTGTGTTGCTGTCTGCATAGAGCTTATCCCTCCCTCCCTCCCTCCCTCCC
TCGCAGCCGACCCCATCGAGAAGGAGATCGCCGCCATTGCCAAAGCTAAC
ACTTTCCTGCCCGAGCGTTACTTCTCGTTTGGCCTGTGCAAAACGATGGA
GGCCGTCGGCGTCGAGGTAGGGAGGGAGCGGAGCGGAATGGTTGTTATCC
CTCACAGGAGTTCACTACGCAGACACGCGCCTCCCTCTCCTTCCTTCCAC
TCACCTCCCCCTCCCCCCCCCCCCCCCCCCCTCCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGGTGAACTGGGATT
CGATCAAAGTTTGGTGCGGAAAGCTTAATATGGACGAATCCCGCACGCAA
CTCGATTGGGATCTGCTGGAGCGGTACGTATGAAAGCCTCCCTCCCTTCC
TCTGACCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCGTTCTCTTGG
CTCCAGGGGTCGATGGCTGGACGCGGCCTATCCCAC back to topCoding sequence (CDS) from alignment at scaffold_59:19403..21938+ >mRNA_10781 ID=mRNA_10781|Name=jgi.p|Nanoce1779_2|356280|organism=Nannochloropsis oceanica|type=CDS|length=6528bp|location=Sequence derived from alignment at scaffold_59:19403..21938+ (Nannochloropsis oceanica) ATGACAATGGCACGCTCAATACCGGCGGTGGCTGCGGCTGCCTGCCTGCT TGTCAGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGCCTCCACCCCCTCCT CGTCCCGACTTTATTCTGCTGATGGCATGGCGCTGGCCTCCGGAGGTCTC CGGCCATCTACCCTCGATCTTAGCCAGATGACGGTTCACGCTGGGCAAGA CGCATTGTTGAAATTTCAGGAGAAGCGCAAGGCGGCCGCCATCATTTCTG ACGCGGAGCATGAGCCTGTCGAGCACACGATGAAGCGCTTCAACAACTTG TACGGCCGCCCTGTCATCCCCTTCTACCGCACTACACTCTACGAGCTCGT CCAGACGGGTCACTTGGCCGTGACGGACGCCTCCTTCATGTACACACACT TCTTCGCTTTCGGCTTCCTCTATGCCTTCGAGACCGTTTTCAAAGGATAT CCTGTTCCCAACGAGTGGGAGGCGCTCTTCGAGGCAGCGGCCAAGAGCGC CAAGCTGGATCCAGCGAAGCTCCGAGCGGACGCGGAGGCTCTCAAGACGT ATATGGCCAGTGGCAAGACACAGAATGACTTTGTCCGCGCCATCGACAGC CCGAATGAATCCGACCCCATCGAGAAGGAGATCGCCGCCATTGCCAAAGC TAACACTTTCCTGCCCGAGCGTTACTTCTCGTTTGGCCTGTGCAAAACGA TGGAGGCCGTCGGCGTCGAGGTGAACTGGGATTCGATCAAAGTTTGGTGC GGAAAGCTTAATATGGACGAATCCCGCACGCAACTCGATTGGGATCTGCT GGAGCGGTACGTATGAATGACAATGGCACGCTCAATACCGGCGGTGGCTG CGGCTGCCTGCCTGCTTGTCAGCGGTGCTTCTGCCTTCCTCCTCCCCTTT GCCTCCACCCCCTCCTCGTCCCGACTTTATTCTGCTGATGGCATGGCGCT GGCCTCCGGAGGTCTCCGGCCATCTACCCTCGATCTTAGCCAGATGACGG TTCACGCTGGGCAAGACGCATTGTTGAAATTTCAGGAGAAGCGCAAGGCG GCCGCCATCATTTCTGACGCGGAGCATGAGCCTGTCGAGCACACGATGAA GCGCTTCAACAACTTGTACGGCCGCCCTGTCATCCCCTTCTACCGCACTA CACTCTACGAGCTCGTCCAGACGGGTCACTTGGCCGTGACGGACGCCTCC TTCATGTACACACACTTCTTCGCTTTCGGCTTCCTCTATGCCTTCGAGAC CGTTTTCAAAGGATATCCTGTTCCCAACGAGTGGGAGGCGCTCTTCGAGG CAGCGGCCAAGAGCGCCAAGCTGGATCCAGCGAAGCTCCGAGCGGACGCG GAGGCTCTCAAGACGTATATGGCCAGTGGCAAGACACAGAATGACTTTGT CCGCGCCATCGACAGCCCGAATGAATCCGACCCCATCGAGAAGGAGATCG CCGCCATTGCCAAAGCTAACACTTTCCTGCCCGAGCGTTACTTCTCGTTT GGCCTGTGCAAAACGATGGAGGCCGTCGGCGTCGAGGTGAACTGGGATTC GATCAAAGTTTGGTGCGGAAAGCTTAATATGGACGAATCCCGCACGCAAC TCGATTGGGATCTGCTGGAGCGGTACGTATGAATGACAATGGCACGCTCA ATACCGGCGGTGGCTGCGGCTGCCTGCCTGCTTGTCAGCGGTGCTTCTGC CTTCCTCCTCCCCTTTGCCTCCACCCCCTCCTCGTCCCGACTTTATTCTG CTGATGGCATGGCGCTGGCCTCCGGAGGTCTCCGGCCATCTACCCTCGAT CTTAGCCAGATGACGGTTCACGCTGGGCAAGACGCATTGTTGAAATTTCA GGAGAAGCGCAAGGCGGCCGCCATCATTTCTGACGCGGAGCATGAGCCTG TCGAGCACACGATGAAGCGCTTCAACAACTTGTACGGCCGCCCTGTCATC CCCTTCTACCGCACTACACTCTACGAGCTCGTCCAGACGGGTCACTTGGC CGTGACGGACGCCTCCTTCATGTACACACACTTCTTCGCTTTCGGCTTCC TCTATGCCTTCGAGACCGTTTTCAAAGGATATCCTGTTCCCAACGAGTGG GAGGCGCTCTTCGAGGCAGCGGCCAAGAGCGCCAAGCTGGATCCAGCGAA GCTCCGAGCGGACGCGGAGGCTCTCAAGACGTATATGGCCAGTGGCAAGA CACAGAATGACTTTGTCCGCGCCATCGACAGCCCGAATGAATCCGACCCC ATCGAGAAGGAGATCGCCGCCATTGCCAAAGCTAACACTTTCCTGCCCGA GCGTTACTTCTCGTTTGGCCTGTGCAAAACGATGGAGGCCGTCGGCGTCG AGGTGAACTGGGATTCGATCAAAGTTTGGTGCGGAAAGCTTAATATGGAC GAATCCCGCACGCAACTCGATTGGGATCTGCTGGAGCGGTACGTATGAAT GACAATGGCACGCTCAATACCGGCGGTGGCTGCGGCTGCCTGCCTGCTTG TCAGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGCCTCCACCCCCTCCTCG TCCCGACTTTATTCTGCTGATGGCATGGCGCTGGCCTCCGGAGGTCTCCG GCCATCTACCCTCGATCTTAGCCAGATGACGGTTCACGCTGGGCAAGACG CATTGTTGAAATTTCAGGAGAAGCGCAAGGCGGCCGCCATCATTTCTGAC GCGGAGCATGAGCCTGTCGAGCACACGATGAAGCGCTTCAACAACTTGTA CGGCCGCCCTGTCATCCCCTTCTACCGCACTACACTCTACGAGCTCGTCC AGACGGGTCACTTGGCCGTGACGGACGCCTCCTTCATGTACACACACTTC TTCGCTTTCGGCTTCCTCTATGCCTTCGAGACCGTTTTCAAAGGATATCC TGTTCCCAACGAGTGGGAGGCGCTCTTCGAGGCAGCGGCCAAGAGCGCCA AGCTGGATCCAGCGAAGCTCCGAGCGGACGCGGAGGCTCTCAAGACGTAT ATGGCCAGTGGCAAGACACAGAATGACTTTGTCCGCGCCATCGACAGCCC GAATGAATCCGACCCCATCGAGAAGGAGATCGCCGCCATTGCCAAAGCTA ACACTTTCCTGCCCGAGCGTTACTTCTCGTTTGGCCTGTGCAAAACGATG GAGGCCGTCGGCGTCGAGGTGAACTGGGATTCGATCAAAGTTTGGTGCGG AAAGCTTAATATGGACGAATCCCGCACGCAACTCGATTGGGATCTGCTGG AGCGGTACGTATGAATGACAATGGCACGCTCAATACCGGCGGTGGCTGCG GCTGCCTGCCTGCTTGTCAGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGC CTCCACCCCCTCCTCGTCCCGACTTTATTCTGCTGATGGCATGGCGCTGG CCTCCGGAGGTCTCCGGCCATCTACCCTCGATCTTAGCCAGATGACGGTT CACGCTGGGCAAGACGCATTGTTGAAATTTCAGGAGAAGCGCAAGGCGGC CGCCATCATTTCTGACGCGGAGCATGAGCCTGTCGAGCACACGATGAAGC GCTTCAACAACTTGTACGGCCGCCCTGTCATCCCCTTCTACCGCACTACA CTCTACGAGCTCGTCCAGACGGGTCACTTGGCCGTGACGGACGCCTCCTT CATGTACACACACTTCTTCGCTTTCGGCTTCCTCTATGCCTTCGAGACCG TTTTCAAAGGATATCCTGTTCCCAACGAGTGGGAGGCGCTCTTCGAGGCA GCGGCCAAGAGCGCCAAGCTGGATCCAGCGAAGCTCCGAGCGGACGCGGA GGCTCTCAAGACGTATATGGCCAGTGGCAAGACACAGAATGACTTTGTCC GCGCCATCGACAGCCCGAATGAATCCGACCCCATCGAGAAGGAGATCGCC GCCATTGCCAAAGCTAACACTTTCCTGCCCGAGCGTTACTTCTCGTTTGG CCTGTGCAAAACGATGGAGGCCGTCGGCGTCGAGGTGAACTGGGATTCGA TCAAAGTTTGGTGCGGAAAGCTTAATATGGACGAATCCCGCACGCAACTC GATTGGGATCTGCTGGAGCGGTACGTATGAATGACAATGGCACGCTCAAT ACCGGCGGTGGCTGCGGCTGCCTGCCTGCTTGTCAGCGGTGCTTCTGCCT TCCTCCTCCCCTTTGCCTCCACCCCCTCCTCGTCCCGACTTTATTCTGCT GATGGCATGGCGCTGGCCTCCGGAGGTCTCCGGCCATCTACCCTCGATCT TAGCCAGATGACGGTTCACGCTGGGCAAGACGCATTGTTGAAATTTCAGG AGAAGCGCAAGGCGGCCGCCATCATTTCTGACGCGGAGCATGAGCCTGTC GAGCACACGATGAAGCGCTTCAACAACTTGTACGGCCGCCCTGTCATCCC CTTCTACCGCACTACACTCTACGAGCTCGTCCAGACGGGTCACTTGGCCG TGACGGACGCCTCCTTCATGTACACACACTTCTTCGCTTTCGGCTTCCTC TATGCCTTCGAGACCGTTTTCAAAGGATATCCTGTTCCCAACGAGTGGGA GGCGCTCTTCGAGGCAGCGGCCAAGAGCGCCAAGCTGGATCCAGCGAAGC TCCGAGCGGACGCGGAGGCTCTCAAGACGTATATGGCCAGTGGCAAGACA CAGAATGACTTTGTCCGCGCCATCGACAGCCCGAATGAATCCGACCCCAT CGAGAAGGAGATCGCCGCCATTGCCAAAGCTAACACTTTCCTGCCCGAGC GTTACTTCTCGTTTGGCCTGTGCAAAACGATGGAGGCCGTCGGCGTCGAG GTGAACTGGGATTCGATCAAAGTTTGGTGCGGAAAGCTTAATATGGACGA ATCCCGCACGCAACTCGATTGGGATCTGCTGGAGCGGTACGTATGAATGA CAATGGCACGCTCAATACCGGCGGTGGCTGCGGCTGCCTGCCTGCTTGTC AGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGCCTCCACCCCCTCCTCGTC CCGACTTTATTCTGCTGATGGCATGGCGCTGGCCTCCGGAGGTCTCCGGC CATCTACCCTCGATCTTAGCCAGATGACGGTTCACGCTGGGCAAGACGCA TTGTTGAAATTTCAGGAGAAGCGCAAGGCGGCCGCCATCATTTCTGACGC GGAGCATGAGCCTGTCGAGCACACGATGAAGCGCTTCAACAACTTGTACG GCCGCCCTGTCATCCCCTTCTACCGCACTACACTCTACGAGCTCGTCCAG ACGGGTCACTTGGCCGTGACGGACGCCTCCTTCATGTACACACACTTCTT CGCTTTCGGCTTCCTCTATGCCTTCGAGACCGTTTTCAAAGGATATCCTG TTCCCAACGAGTGGGAGGCGCTCTTCGAGGCAGCGGCCAAGAGCGCCAAG CTGGATCCAGCGAAGCTCCGAGCGGACGCGGAGGCTCTCAAGACGTATAT GGCCAGTGGCAAGACACAGAATGACTTTGTCCGCGCCATCGACAGCCCGA ATGAATCCGACCCCATCGAGAAGGAGATCGCCGCCATTGCCAAAGCTAAC ACTTTCCTGCCCGAGCGTTACTTCTCGTTTGGCCTGTGCAAAACGATGGA GGCCGTCGGCGTCGAGGTGAACTGGGATTCGATCAAAGTTTGGTGCGGAA AGCTTAATATGGACGAATCCCGCACGCAACTCGATTGGGATCTGCTGGAG CGGTACGTATGAATGACAATGGCACGCTCAATACCGGCGGTGGCTGCGGC TGCCTGCCTGCTTGTCAGCGGTGCTTCTGCCTTCCTCCTCCCCTTTGCCT CCACCCCCTCCTCGTCCCGACTTTATTCTGCTGATGGCATGGCGCTGGCC TCCGGAGGTCTCCGGCCATCTACCCTCGATCTTAGCCAGATGACGGTTCA CGCTGGGCAAGACGCATTGTTGAAATTTCAGGAGAAGCGCAAGGCGGCCG CCATCATTTCTGACGCGGAGCATGAGCCTGTCGAGCACACGATGAAGCGC TTCAACAACTTGTACGGCCGCCCTGTCATCCCCTTCTACCGCACTACACT CTACGAGCTCGTCCAGACGGGTCACTTGGCCGTGACGGACGCCTCCTTCA TGTACACACACTTCTTCGCTTTCGGCTTCCTCTATGCCTTCGAGACCGTT TTCAAAGGATATCCTGTTCCCAACGAGTGGGAGGCGCTCTTCGAGGCAGC GGCCAAGAGCGCCAAGCTGGATCCAGCGAAGCTCCGAGCGGACGCGGAGG CTCTCAAGACGTATATGGCCAGTGGCAAGACACAGAATGACTTTGTCCGC GCCATCGACAGCCCGAATGAATCCGACCCCATCGAGAAGGAGATCGCCGC CATTGCCAAAGCTAACACTTTCCTGCCCGAGCGTTACTTCTCGTTTGGCC TGTGCAAAACGATGGAGGCCGTCGGCGTCGAGGTGAACTGGGATTCGATC AAAGTTTGGTGCGGAAAGCTTAATATGGACGAATCCCGCACGCAACTCGA TTGGGATCTGCTGGAGCGGTACGTATGA back to top
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