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Properties
Property Name | Value |
TranscriptId | 409029 |
Track | FilteredModels2 |
ProteinId | 408943 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_73 | supercontig | scaffold_73:68489..70908 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10751 ID=mRNA_10751|Name=jgi.p|Nanoce1779_2|408943|organism=Nannochloropsis oceanica|type=mRNA|length=1889bp GGGAGGGAGGGAGGGAGGGAGGGAAGGAAAGGAGGTGGGGTTTCAATTCG GATGCATAGCTTAGTGCCTTGGTAATTGTGTGCGGCGAATCTTACCCCAT ACACCCTTATGTTTCCCTTCTCCCTCTCTCCCCTCCACCTCAGCCACTGG ATCTGAGCACGCCCAAGACGTTGCACCTTATCATCAACGGCAGCCACGCC TCTTCCTCCCCCTCTTCCTCCCCCCCTTCCTCCTCGCCCTCCCTCCCTGC CTCGGCCCCTAGTTCCTTGCGTGGGCCATCGTCCCTGTCGACCCTCGCTG GTCATCATGGGAGGGACGGAAGGAATGTGAGCGGCAGCAGTAGCAATGGT GCGGCTGTCATGTTTCCCCGACCGACGGCTACCTCGCCTATCCCCGTGAC AGGAGGAGGAGGGGGAGGAGAGGGGGGGGGAGGAGGAGCAGGCGCTTTAC CGCATGGAATGATCGTGGAAGCTGGGGAAGAGAGGGGTAGGGAGAACATT CGTGCCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATGATGTCAC GGAGGAGGGGGTGCAACGACAGGGATTGTCGCGCCTAATTGCCGGGCGTG GCCGACGAGTGGCAGGAGGGGAAGAGACAGGCCTTCCCTCCTTCCCTCCC TCGGCCCCGGGGGACTCTCCTGGGACTGCAGGAGAGGGGAACATCAACAT TCCCTCAGGCGAATGTGGTCCGCAGCCACCTGCCCCTCCCTCCGTCCCTT CTTCCACCCCTTCCTCCGCCGTTTCCTCCTCCTTTTCCTCTTCTTCCGCC CACACCCGCGTTCCCACCAGCAGCACCGCCGGAAACTATGAAGCCTCTGA GCAGGAAGCTTTTGCACGGCTCCACCAGGAGGAGCAACAGCAGGAGCAGG AGCAACTGCAGCTGCAGCAGCAACAGCAGTACCTGCTGTCTTATCATTAC TACCAAGCACTCCAGCACTACCACCTCTGGTACGCGCACCAGCAGCAGCA GCAGCAGCATCAGCATTATCATTACTACATGCAGCTGCACCAGCAGCAGC AGCAGTACCAGCAGCAGCAGTACAATCCGCTCTTCCAGCAGCAACAAGAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCCGGAACAAGCAGCCGATGCGAA TGCCCTCATCCTCCCTGCTTGGCCACGGATTGTGGAGGGTGGGCGCGCTG TCCTCGGCCTCTGTGACTGGCAACTAGCGGCCAAGATGGTGATGCTCATC TTCCTCCTTAATCCAGGCGATCCCCGTCGTCTCATGACTCTGTGCGGAGT GGCAGCTGTCGCGTACATGTACCAGACGGGCATCCTCGCCTTGGTCTTGG GCTCTCCGTTCCGCTGGCCAGTCGAAGGAGCAGCAGCCGCGGCCGACGGG CAACCACCACAGCAGCAGCCGCCACAGGAGGCAGGAGGGGAGGGAGGAAG GGAGGGAGGGGCAGCTATGACGTTTTGGGACAAGGCGAAGAAGATGTGCT ACACGGGAGCACTGCCGGGAGGGGAACAGAGGTGGTGGATAGAGGGTTTC GTGCTCGGGGCCTCCTTCTTCCTCTCCCTCTTCCCAACCTGGATTCCGTA TGCGGTGGTAGAGGGAGGGGCGGAGGGAAGGGAGGAGAGGGTGGAGCCGG CAGTGAGGGAGGGGCTTGTGCAGGGATAAGAGGGATAAGATGAAGATAAG CAGGAAGTGTGGTGAAAAACGATTTTCCAAAGGACGGAGATGAGGGCGAC TGGGGAGGGAAAGATGGAAGGAGGGAGGAAGAGTATGGCACCTGGACTGC TTGGTCACGGTGTGTACATTGTAGTCAAGCGTCGTCTTGGGAGGATAAAA AAAGTGGCAGCAGCAGCAGCAGCAGCAGCCACGTTCACG back to topprotein sequence of jgi.p|Nanoce1779_2|408943 >mRNA_10751-protein ID=mRNA_10751-protein|Name=jgi.p|Nanoce1779_2|408943|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp MFPRPTATSPIPVTGGGGGGEGGGGGAGALPHGMIVEAGEERGRENIRAN SSSSSSSSSSNDVTEEGVQRQGLSRLIAGRGRRVAGGEETGLPSFPPSAP GDSPGTAGEGNINIPSGECGPQPPAPPSVPSSTPSSAVSSSFSSSSAHTR VPTSSTAGNYEASEQEAFARLHQEEQQQEQEQLQLQQQQQYLLSYHYYQA LQHYHLWYAHQQQQQQHQHYHYYMQLHQQQQQYQQQQYNPLFQQQQEQQQ QQQQQQPEQAADANALILPAWPRIVEGGRAVLGLCDWQLAAKMVMLIFLL NPGDPRRLMTLCGVAAVAYMYQTGILALVLGSPFRWPVEGAAAAADGQPP QQQPPQEAGGEGGREGGAAMTFWDKAKKMCYTGALPGGEQRWWIEGFVLG ASFFLSLFPTWIPYAVVEGGAEGREERVEPAVREGLVQG* back to topmRNA from alignment at scaffold_73:68489..70908- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10751 ID=mRNA_10751|Name=jgi.p|Nanoce1779_2|408943|organism=Nannochloropsis oceanica|type=mRNA|length=2420bp|location=Sequence derived from alignment at scaffold_73:68489..70908- (Nannochloropsis oceanica) GGGAGGGAGGGAGGGAGGGAGGGAAGGAAAGGAGGTGGGGTTTCAATTCG
GATGCATAGCTTAGTGCCTTGGTAATTGTGTGCGGCGAATCTTACCCCAT
ACACCCTTATGTTTCCCTTCTCCCTCTCTCCCCTCCACCTCAGCCACTGG
ATCTGAGCACGCCCAAGACGTTGCACCTTATCATCAACGGCAGCCACGCC
TCTTCCTCCCCCTCTTCCTCCCCCCCTTCCTCCTCGCCCTCCCTCCCTGC
CTCGGCCCCTAGTTCCTTGCGTGGGCCATCGTCCCTGTCGACCCTCGCTG
GTCATCATGGGAGGGACGGAAGGAATGTGAGCGGCAGCAGTAGCAATGGT
GCGGCTGTCATGTTTCCCCGACCGACGGCTACCTCGCCTATCCCCGTGAC
AGGAGGTGGAGGGGGAGGAGGGGGGGGGAGGAGGAGGGGGAGGAGAGGGG
GGGGGAGGAGGAGCAGGCGCTTTACCGCATGGAATGATCGTGGAAGCTGG
GGAAGAGAGGGGTAGGGAGAACATTCGTGCCAACAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAATGATGTCACGGAGGAGGGGGTGCAACGACAGGGA
TTGTCGCGCCTAATTGCCGGGCGTGGCCGACGAGTGGCAGGAGGGGAAGA
GACAGGCCTTCCCTCCTTCCCTCCCTCGGCCCCGGGGGACTCTCCTGGGA
CTGCAGGAGAGGGGAACATCAACATTCCCTCAGGCGAATGTGGTCCGCAG
CCACCTGCCCCTCCCTCCGTCCCTTCTTCCACCCCTTCCTCCGCCGTTTC
CTCCTCCTTTTCCTCTTCTTCCGCCCACACCCGCGTTCCCACCAGCAGCA
CCGCCGGAAACTATGAAGCCTCTGAGCAGGAAGCTTTTGCACGGCTCCAC
CAGGAGGAGCAACAGCAGGAGCAGGAGCAACTGCAGCTGCAGCAGCAACA
GCAGTACCTGCTGTCTTATCATTACTACCAAGCACTCCAGCACTACCACC
TCTGGTACGCGCACCAGCAGCAGCAGCAGCAGCATCAGCATTATCATTAC
TACATGCAGCTGCACCAGCAGCAGCAGCAGTACCAGCAGCAGCAGTACAA
TCCGCTCTTCCAGCAGCAACAAGAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCCGGAACAAGCAGCCGATGCGAATGCCCTCATCCTCCCTGCTTGGCCA
CGGATTGTGGAGGTACGTCCTCCTTGCGTCCATTCCACCCTTTCTCTCTC
CCTCCTTTCTTCTCTTCTTCCTCCTCGAATCATCTCGATACTTCTCCCAA
AGTCATTGAACCACACCCTCCCTCCCTCCCTTCTTCCCTTTCTCCCTCCC
TTCCTCCCTTCCTTCCTCTAGGGTGGGCGCGCTGTCCTCGGCCTCTGTGA
CTGGCAACTAGCGGCCAAGATGGTGATGCTCATCTTCCTCCTTAATCCAG
GCGATCCCCGTCGTCTCATGACTCTGTGCGGAGTGGCAGCTGTCGCGTAC
ATGTACCAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGG
GAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GATACATTCATACCCATGACAGAGTAGGGGGTTCCTTAGGTCTTGTGAGA
GCTTGATTATATATTACTGAGTTAGTCTCTAGTTTAATATGAGTCATGAC
CTGTACGTAGAATTATTTCCTCGGCATGTCCCTCCTTCCTGTCTTTTGCA
TTCGCCAATCGCTTTTTACGCTCCGTACTTGTCCTACTCCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTCTCACGTTTCTCC
CCACAGACGGGCATCCTCGCCTTGGTCTTGGGCTCTCCGTTCCGCTGGCC
AGTCGAAGGAGCAGCAGCCGCGGCCGACGGGCAACCACCACAGCAGCAGC
CGCCACAGGAGGCAGGAGGGGAGGGAGGAAGGGAGGGAGGGGCAGCTATG
ACGTTTTGGGACAAGGCGAAGAAGATGTGCTACACGGGAGCACTGCCGGG
AGGGGAACAGAGGTGGTGGATAGAGGGTTTCGTGCTCGGGGCCTCCTTCT
TCCTCTCCCTCTTCCCAACCTGGATTCCGTATGCGGTGGTAGAGGGAGGG
GCGGAGGGAAGGGAGGAGAGGGTGGAGCCGGCAGTGAGGGAGGGGCTTGT
GCAGGGATAAGAGGGATAAGATGAAGATAAGCAGGAAGTGTGGTGAAAAA
CGATTTTCCAAAGGACGGAGATGAGGGCGACTGGGGAGGGAAAGATGGAA
GGAGGGAGGAAGAGTATGGCACCTGGACTGCTTGGTCACGGTGTGTACAT
TGTAGTCAAGCGTCGTCTTGGGAGGATAAAAAAAGTGGCAGCAGCAGCAG
CAGCAGCAGCCACGTTCACG back to topCoding sequence (CDS) from alignment at scaffold_73:68489..70908- >mRNA_10751 ID=mRNA_10751|Name=jgi.p|Nanoce1779_2|408943|organism=Nannochloropsis oceanica|type=CDS|length=5280bp|location=Sequence derived from alignment at scaffold_73:68489..70908- (Nannochloropsis oceanica) ACGGGCATCCTCGCCTTGGTCTTGGGCTCTCCGTTCCGCTGGCCAGTCGA AGGAGCAGCAGCCGCGGCCGACGGGCAACCACCACAGCAGCAGCCGCCAC AGGAGGCAGGAGGGGAGGGAGGAAGGGAGGGAGGGGCAGCTATGACGTTT TGGGACAAGGCGAAGAAGATGTGCTACACGGGAGCACTGCCGGGAGGGGA ACAGAGGTGGTGGATAGAGGGTTTCGTGCTCGGGGCCTCCTTCTTCCTCT CCCTCTTCCCAACCTGGATTCCGTATGCGGTGGTAGAGGGAGGGGCGGAG GGAAGGGAGGAGAGGGTGGAGCCGGCAGTGAGGGAGGGGCTTGTGCAGGG ATAAGGTGGGCGCGCTGTCCTCGGCCTCTGTGACTGGCAACTAGCGGCCA AGATGGTGATGCTCATCTTCCTCCTTAATCCAGGCGATCCCCGTCGTCTC ATGACTCTGTGCGGAGTGGCAGCTGTCGCGTACATGTACCAGGAGGAGGG GGAGGAGAGGGGGGGGGAGGAGGAGCAGGCGCTTTACCGCATGGAATGAT CGTGGAAGCTGGGGAAGAGAGGGGTAGGGAGAACATTCGTGCCAACAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAATGATGTCACGGAGGAGGGGGTG CAACGACAGGGATTGTCGCGCCTAATTGCCGGGCGTGGCCGACGAGTGGC AGGAGGGGAAGAGACAGGCCTTCCCTCCTTCCCTCCCTCGGCCCCGGGGG ACTCTCCTGGGACTGCAGGAGAGGGGAACATCAACATTCCCTCAGGCGAA TGTGGTCCGCAGCCACCTGCCCCTCCCTCCGTCCCTTCTTCCACCCCTTC CTCCGCCGTTTCCTCCTCCTTTTCCTCTTCTTCCGCCCACACCCGCGTTC CCACCAGCAGCACCGCCGGAAACTATGAAGCCTCTGAGCAGGAAGCTTTT GCACGGCTCCACCAGGAGGAGCAACAGCAGGAGCAGGAGCAACTGCAGCT GCAGCAGCAACAGCAGTACCTGCTGTCTTATCATTACTACCAAGCACTCC AGCACTACCACCTCTGGTACGCGCACCAGCAGCAGCAGCAGCAGCATCAG CATTATCATTACTACATGCAGCTGCACCAGCAGCAGCAGCAGTACCAGCA GCAGCAGTACAATCCGCTCTTCCAGCAGCAACAAGAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCCGGAACAAGCAGCCGATGCGAATGCCCTCATCCTC CCTGCTTGGCCACGGATTGTGGAGATGTTTCCCCGACCGACGGCTACCTC GCCTATCCCCGTGACAGGAGACGGGCATCCTCGCCTTGGTCTTGGGCTCT CCGTTCCGCTGGCCAGTCGAAGGAGCAGCAGCCGCGGCCGACGGGCAACC ACCACAGCAGCAGCCGCCACAGGAGGCAGGAGGGGAGGGAGGAAGGGAGG GAGGGGCAGCTATGACGTTTTGGGACAAGGCGAAGAAGATGTGCTACACG GGAGCACTGCCGGGAGGGGAACAGAGGTGGTGGATAGAGGGTTTCGTGCT CGGGGCCTCCTTCTTCCTCTCCCTCTTCCCAACCTGGATTCCGTATGCGG TGGTAGAGGGAGGGGCGGAGGGAAGGGAGGAGAGGGTGGAGCCGGCAGTG AGGGAGGGGCTTGTGCAGGGATAAGGTGGGCGCGCTGTCCTCGGCCTCTG TGACTGGCAACTAGCGGCCAAGATGGTGATGCTCATCTTCCTCCTTAATC CAGGCGATCCCCGTCGTCTCATGACTCTGTGCGGAGTGGCAGCTGTCGCG TACATGTACCAGGAGGAGGGGGAGGAGAGGGGGGGGGAGGAGGAGCAGGC GCTTTACCGCATGGAATGATCGTGGAAGCTGGGGAAGAGAGGGGTAGGGA GAACATTCGTGCCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATG ATGTCACGGAGGAGGGGGTGCAACGACAGGGATTGTCGCGCCTAATTGCC GGGCGTGGCCGACGAGTGGCAGGAGGGGAAGAGACAGGCCTTCCCTCCTT CCCTCCCTCGGCCCCGGGGGACTCTCCTGGGACTGCAGGAGAGGGGAACA TCAACATTCCCTCAGGCGAATGTGGTCCGCAGCCACCTGCCCCTCCCTCC GTCCCTTCTTCCACCCCTTCCTCCGCCGTTTCCTCCTCCTTTTCCTCTTC TTCCGCCCACACCCGCGTTCCCACCAGCAGCACCGCCGGAAACTATGAAG CCTCTGAGCAGGAAGCTTTTGCACGGCTCCACCAGGAGGAGCAACAGCAG GAGCAGGAGCAACTGCAGCTGCAGCAGCAACAGCAGTACCTGCTGTCTTA TCATTACTACCAAGCACTCCAGCACTACCACCTCTGGTACGCGCACCAGC AGCAGCAGCAGCAGCATCAGCATTATCATTACTACATGCAGCTGCACCAG CAGCAGCAGCAGTACCAGCAGCAGCAGTACAATCCGCTCTTCCAGCAGCA ACAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGGAACAAGCAGCCG ATGCGAATGCCCTCATCCTCCCTGCTTGGCCACGGATTGTGGAGATGTTT CCCCGACCGACGGCTACCTCGCCTATCCCCGTGACAGGAGACGGGCATCC TCGCCTTGGTCTTGGGCTCTCCGTTCCGCTGGCCAGTCGAAGGAGCAGCA GCCGCGGCCGACGGGCAACCACCACAGCAGCAGCCGCCACAGGAGGCAGG AGGGGAGGGAGGAAGGGAGGGAGGGGCAGCTATGACGTTTTGGGACAAGG CGAAGAAGATGTGCTACACGGGAGCACTGCCGGGAGGGGAACAGAGGTGG TGGATAGAGGGTTTCGTGCTCGGGGCCTCCTTCTTCCTCTCCCTCTTCCC AACCTGGATTCCGTATGCGGTGGTAGAGGGAGGGGCGGAGGGAAGGGAGG AGAGGGTGGAGCCGGCAGTGAGGGAGGGGCTTGTGCAGGGATAAGGTGGG CGCGCTGTCCTCGGCCTCTGTGACTGGCAACTAGCGGCCAAGATGGTGAT GCTCATCTTCCTCCTTAATCCAGGCGATCCCCGTCGTCTCATGACTCTGT GCGGAGTGGCAGCTGTCGCGTACATGTACCAGGAGGAGGGGGAGGAGAGG GGGGGGGAGGAGGAGCAGGCGCTTTACCGCATGGAATGATCGTGGAAGCT GGGGAAGAGAGGGGTAGGGAGAACATTCGTGCCAACAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAATGATGTCACGGAGGAGGGGGTGCAACGACAGG GATTGTCGCGCCTAATTGCCGGGCGTGGCCGACGAGTGGCAGGAGGGGAA GAGACAGGCCTTCCCTCCTTCCCTCCCTCGGCCCCGGGGGACTCTCCTGG GACTGCAGGAGAGGGGAACATCAACATTCCCTCAGGCGAATGTGGTCCGC AGCCACCTGCCCCTCCCTCCGTCCCTTCTTCCACCCCTTCCTCCGCCGTT TCCTCCTCCTTTTCCTCTTCTTCCGCCCACACCCGCGTTCCCACCAGCAG CACCGCCGGAAACTATGAAGCCTCTGAGCAGGAAGCTTTTGCACGGCTCC ACCAGGAGGAGCAACAGCAGGAGCAGGAGCAACTGCAGCTGCAGCAGCAA CAGCAGTACCTGCTGTCTTATCATTACTACCAAGCACTCCAGCACTACCA CCTCTGGTACGCGCACCAGCAGCAGCAGCAGCAGCATCAGCATTATCATT ACTACATGCAGCTGCACCAGCAGCAGCAGCAGTACCAGCAGCAGCAGTAC AATCCGCTCTTCCAGCAGCAACAAGAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCCGGAACAAGCAGCCGATGCGAATGCCCTCATCCTCCCTGCTTGGC CACGGATTGTGGAGATGTTTCCCCGACCGACGGCTACCTCGCCTATCCCC GTGACAGGAGACGGGCATCCTCGCCTTGGTCTTGGGCTCTCCGTTCCGCT GGCCAGTCGAAGGAGCAGCAGCCGCGGCCGACGGGCAACCACCACAGCAG CAGCCGCCACAGGAGGCAGGAGGGGAGGGAGGAAGGGAGGGAGGGGCAGC TATGACGTTTTGGGACAAGGCGAAGAAGATGTGCTACACGGGAGCACTGC CGGGAGGGGAACAGAGGTGGTGGATAGAGGGTTTCGTGCTCGGGGCCTCC TTCTTCCTCTCCCTCTTCCCAACCTGGATTCCGTATGCGGTGGTAGAGGG AGGGGCGGAGGGAAGGGAGGAGAGGGTGGAGCCGGCAGTGAGGGAGGGGC TTGTGCAGGGATAAGGTGGGCGCGCTGTCCTCGGCCTCTGTGACTGGCAA CTAGCGGCCAAGATGGTGATGCTCATCTTCCTCCTTAATCCAGGCGATCC CCGTCGTCTCATGACTCTGTGCGGAGTGGCAGCTGTCGCGTACATGTACC AGGAGGAGGGGGAGGAGAGGGGGGGGGAGGAGGAGCAGGCGCTTTACCGC ATGGAATGATCGTGGAAGCTGGGGAAGAGAGGGGTAGGGAGAACATTCGT GCCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATGATGTCACGGA GGAGGGGGTGCAACGACAGGGATTGTCGCGCCTAATTGCCGGGCGTGGCC GACGAGTGGCAGGAGGGGAAGAGACAGGCCTTCCCTCCTTCCCTCCCTCG GCCCCGGGGGACTCTCCTGGGACTGCAGGAGAGGGGAACATCAACATTCC CTCAGGCGAATGTGGTCCGCAGCCACCTGCCCCTCCCTCCGTCCCTTCTT CCACCCCTTCCTCCGCCGTTTCCTCCTCCTTTTCCTCTTCTTCCGCCCAC ACCCGCGTTCCCACCAGCAGCACCGCCGGAAACTATGAAGCCTCTGAGCA GGAAGCTTTTGCACGGCTCCACCAGGAGGAGCAACAGCAGGAGCAGGAGC AACTGCAGCTGCAGCAGCAACAGCAGTACCTGCTGTCTTATCATTACTAC CAAGCACTCCAGCACTACCACCTCTGGTACGCGCACCAGCAGCAGCAGCA GCAGCATCAGCATTATCATTACTACATGCAGCTGCACCAGCAGCAGCAGC AGTACCAGCAGCAGCAGTACAATCCGCTCTTCCAGCAGCAACAAGAGCAG CAGCAGCAGCAGCAGCAGCAGCAGCCGGAACAAGCAGCCGATGCGAATGC CCTCATCCTCCCTGCTTGGCCACGGATTGTGGAGATGTTTCCCCGACCGA CGGCTACCTCGCCTATCCCCGTGACAGGAG back to top
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