jgi.p|Nanoce1779_2|627461, mRNA_1075 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|627461
Unique Name	mRNA_1075
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4471
Alignment location	scaffold_2:1158610..1163484 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	627547
Track	FilteredModels2
ProteinId	627461

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_2	supercontig	scaffold_2:1158610..1163484 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627461	gene_1075	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627461	mRNA_1075-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1075	CDS_1075	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_2:1158610..1163484-
coding sequence from alignment at scaffold_2:1158610..1163484-

mRNA sequence

>mRNA_1075 ID=mRNA_1075|Name=jgi.p|Nanoce1779_2|627461|organism=Nannochloropsis oceanica|type=mRNA|length=4471bp
CAGAAATGGGACTCCCAAATGTCCCGGGCGGGCGACCAGGACGACGACGG
CATGATAGTTCAAGGAGCGCTCCTCTGCTGTTGTGCCTTGCTGCCGCCGC
CGCCGACTCCCACATGCTGCTGCTACCCCGCCATGTCATGGCTGCCGGCA
GTCCGAGCCTCACAAGTACACCTACAGCTTATGTCCTATCTTCCTTCCAC
CTTGGCTCCAGATTGCTGCAGAAGAGGCCTTTGCAACAACAAAAGACGAG
TATATCATCTACATCATCAGTGCCATCACGCCTTTCAACGACGTCAACCA
CGTCGACACAGCGAAAGTCCATCATGCCCGACGATTACTCAGGTCAACAG
CATGAACGCTTGACCTCCGCTCCTTCCTGGCGCAAGGCGGAGCAAGTCAA
GCAACCGTCAGCCCTCGAAAGTGCCTTGTGGAACTTGCCAGGCATGGCTT
GGTCCGGCGTTTCTTCCGCCCACGCCGGCCTCGTCAACCTAACGGGCTCT
GTGGCAGGCGGCGTCGTGTCAGGCTTTAACGCCGTTGTAAATCCTGTGGC
TGCTGCTTCGGCGACTACGATTACGAATACAATGGGGGCGGCTGCACGGA
ATGGGCGGGGACCCGGAGGGGAGGGAGCCGGCAGTGTACAGAGTCCGAGT
GGCACTAATCAACCGCATGAACTCTATGGTGATGATGGTGAGGAGCTCTT
CAGTCAAGAAGGGGAAGATGATGGTTTTTTTGCGCCGGTGCATGCGTACG
ATGATTCGTTGGAGTTGGTCGTGTGGGATGATGCCACGCTTTACGTGCCA
CCGCCGGATGTGGTAGCTGTCGAGGGACGGGAGGACGACTCACCCATCAT
GAGTCAATTGCAGAATGAGGTGGCTCAGATGCTGGGTAAAACACCTCCAT
CGCCGTCTCCGCGTGGGCCGAAGAAGAATGGGAACAAAGAGCAAATGAGG
GAAAGGAAGGCGCAGCAGCATGCACCAGTATGTGCTGACAGCAATTCTTT
GAGTGTGGCACATTCCAATGACGAGGACAAATCCTATGACACCCTCCACA
ATCGACGTAGTGCTACCGCCCGCCTTCTTGGTCAGGCTGCCCAAAAGGCT
GCCGCTGCTGGTTATCTTGCTGTTCAAGCCGTGTTGATGTGTGCTGCTGC
CCTCATCCAGGGGCCTCAGCAAAGAGCTCTGCAGCTCGCGCACGTGGTGG
ATGTGACTTTACGAGCCATGATTGCGACCCTCGCTTTGTATGGTGCCATT
ATCTCAACCTTCGTCCGTCGCGCCTTCGCTCCTAAAGCCAAAACCCTGCC
AAGGCCCGATGTCTTCCAAAGATTGACAACGACATTCACTCGTTTCCTGC
ATGCGAACTATCCTTGGCTGCTGGCCCACCCCATTTTCTACGGCCGCCCC
TTCCCCTGGCAATGGAAGGGATGGAAGCCTCAACGACCGTCTTCTGACCT
CTCCCGCTCCTCATTAAGTGAAAGCAGGATCCAGGGCTTGCCCACTCTTT
CCGCCCTCCTTCGTGACCTGGGCGATGCCGTCACGCCCCACAACCTCCTC
CAGAAAAAGCGCGAGCGTCGCGCCGAGGAACAGCAGCTGCAGCTTGACCA
GCTGCAGCCCTGGAATTTACCCTTTCATGTAAAGGATGACTGTTCGAAGT
CGACCTTACAGCTGAGCCATGATGCACGGGACTGGGGGGCGTTGAGGCCT
ACCTCTCCTCCCTCCCCACGTTTGGATGTCGTCACTCCACTGGTGGATTT
CTCGGCATTGGTTCCCCCTGCAGACGCAGAGGAAAATGATGAAACGATTC
TCCAGAAGGAGATTAATGAGGCATTGAAGTCCCAAGGAGAGGAGCAGCAG
CAGCAGCAGCGAGGAGCTGACACGGCTTTCCCGTCTTTTTCATCTTCCTC
TAACGCGCCCTCTGTCATACGTCACACACCTCCCTCCTTTCCAGTAGCGA
CGACAGCTGCGATTAACATAAATGATGAGGCGAGAAGTTTTAAGAAAACT
TCTGGCACCAACAGTGGCAGCAGCACAACGGAGCAAAGGGCGGCACCCTA
CAGCAAAGGCCCCGAGCTCTTCACTTCCTATTTTCCCCACGAACTCGGGG
AGGAGGAAGGGGCGATTTCTCCATATCTGCAAAAGCTGCACCACCAGCAG
CAGCAACAACAACAACAACAGCAGCAGCAGAAGTTTCAACAGTCAGGAGG
AGCAGCAGTGGCAGCGACAGCAGCAACAGCAGCGGCAACAACAACAATAA
CAGCTGCCCCAGAAAGTCCGACGGACAGCAGCAATAGCGACGACAGCAAC
GACAGCAGTGATGACAACAGTACCATTTTGGATGGAAGAAATGCCAGTGC
TCCTCCAAAAATGAAGAACTCGCGCAAAAAGAAGATGAAATAGACGCCAT
CCGGGCTGCCCAAGACTCAGCCTACGGTCGAATCCTGGCTGACCTCACCA
GCACTCCAATGGCCATCACAGAAGAAGACGTTGTTGACCCCCCTCCTGGT
CTAAATTTTCGAATGCCCTGGGCTGCGAGTGTGCCGAGCCTGGAGCAGAT
GGATAAGAAAATGGTGGTTTTGGCGGTAGAGTCTGCAAGGGCCGTGCAAA
GCAAAACGCAACTCTGGAGATATATTGAGGAGATTGGAATAGCTCCCCTT
CTGGCCGCCATCAAGAAAAGCTTTCATTCCACCGAGGAGGAAGCAGGTGG
TAGCAGCAGTACCGACGGTAGTAGTAGCAGTATCAGCAGCAGCAGCAGCA
CGTCGTCATCTTTTTCTCCTTCCTCTTATCCCTTTCCTCCGGGCTCGCCC
TCCTTTGCTTTTCCGTCCCTTGACGAGGCAACGGCAGGGGAAAAGGGGGT
GTTGCGAACACAAGCAGTGGAAGCCATCTTACATCTCATGAACGTCGCAA
TAGATCTACGTGTGCTCCGCGCTGCATTTGAAGAGGGTCCGGGCCTGGTG
CTAGTGGTAGGGCGAGAGGTTGTTTCTGACCTGATCGACATTGTGGAGGA
GCCCTTGTTGTTGCTTATGCCACGAATAATCCGTCCCCGGAACGACCAGC
TTTTGTATAGAGGGCAGAGAGCAGCGGTGGAGGTGTTGTTTCAACTAGTG
TTGGCATCGGATAAGGCGATAACATTGATTCAGAACGATGGGAGGTTGTG
GAATGCCTTGCAGCAGATGACGGCTGAAGGGATGTATGCCTCCGAGAGCC
CCACATATGCCACGTGCCATAAATTGTTGGCGGCGCTAGGGCACAATGAG
TGGAGGCCACGCCAGCCGGGCCAGAGGGGGTTGAGAATTCTATCCTTTGA
TGGGGGAGGGACACGGGGAGTGCTGTCGGTGGCGTTGTTGAAGCAGGTGA
TGGAGAGGGTAGGGAAGGATGTGTTTGAGACGTTCGACGTCATCTGTGGG
ACAAGCACGGGAGGGATCTTGGCCGTGTTGTTCGGGATTGAGAAGCGGAC
AATCAATGAGGCGGAGGAGTTGTATGATAAACTGGTTAGCAAGATCTTCG
CGTCATCCCCATTAATTCAAACGACCAAGTTGCTACTGCGCACGAGCTAT
TATGACGAGGTGGTGTGGGAGCAGGTGCTGCAAGAAATGCTAGGGGACGA
TTTGATGATCGATTCCATGGGCGAGGGCCCCCTGTCACCCAAAGTTTTCT
GTGCTTCGCTCTCTCTGAAGACCAATCCAGCTTCCCTCTACATTTGGAGA
AACTACGCCTACGGCCCCGACCAAGAGCCTAAACACAGCGGCTCCTTCCG
AGTCATGGTGCGGGATGCTCTGCGAGCCACTACTGCTGCGCCCACCTTCT
TTTCGCCGTTGGAAAAAGACGATGCCAAATACTGTGATGGGGCTTTTTTA
GCGAACAATCCTACAGGTGCGTGCATACGATCCCCTCTGCTTCTTCCTTT
CTTGCCCTCATCAGATGATTTATACTTACCGACCCATCTTATCTCTCCCT
TGCCTCCTCCCACAGCCGTAGCTCTTAATGAGGTCCGCACACTTTATCCC
GGTGTGCCTGTTGAGTGTGTGGTTTCGATTGGCACGGGCGTGCATGTTGA
TAAACGGAAGTCCGACGGTGGGTACGGCTGGGAGGGGATCGTGAATGATC
TGATTAATTGCGCGACCAACACGGAGGTGACGCATGAGACGCTGTCGGTG
TTTTTGCCCAAGAGCAAATATTACCGCTTTAATCCCCAGACTGAATTTTT
CCCCTTGGACGAGACCAAGCCCGAGAGGCTCGCGAGGATGAAGCGGATTG
CCCGCGAATATTTTTGGCAGAGTGAGAATAAGGAGAGGATGAATCAGCTG
GTGCAGTTGTTAAAGAAGGGGGGGAGCCCCTTACCGCACTTGAGGTCGTC
ATTGCGGCCGTAGCGAAGGGACGCGAGGGAAGGGTGAGAGGGAGTGCATG
GATTCAATTTGGGCAACTCTTTGAAAAGAAGAGGAGGGAGAAGGGAGGGA
GGGAGGGAAGAATGAGTGAAG

protein sequence of jgi.p|Nanoce1779_2|627461

>mRNA_1075-protein ID=mRNA_1075-protein|Name=jgi.p|Nanoce1779_2|627461|organism=Nannochloropsis oceanica|type=polypeptide|length=796bp
MGLPNVPGGRPGRRRHDSSRSAPLLLCLAAAAADSHMLLLPRHVMAAGSP
SLTSTPTAYVLSSFHLGSRLLQKRPLQQQKTSISSTSSVPSRLSTTSTTS
TQRKSIMPDDYSGQQHERLTSAPSWRKAEQVKQPSALESALWNLPGMAWS
GVSSAHAGLVNLTGSVAGGVVSGFNAVVNPVAAASATTITNTMGAAARNG
RGPGGEGAGSVQSPSGTNQPHELYGDDGEELFSQEGEDDGFFAPVHAYDD
SLELVVWDDATLYVPPPDVVAVEGREDDSPIMSQLQNEVAQMLGKTPPSP
SPRGPKKNGNKEQMRERKAQQHAPVCADSNSLSVAHSNDEDKSYDTLHNR
RSATARLLGQAAQKAAAAGYLAVQAVLMCAAALIQGPQQRALQLAHVVDV
TLRAMIATLALYGAIISTFVRRAFAPKAKTLPRPDVFQRLTTTFTRFLHA
NYPWLLAHPIFYGRPFPWQWKGWKPQRPSSDLSRSSLSESRIQGLPTLSA
LLRDLGDAVTPHNLLQKKRERRAEEQQLQLDQLQPWNLPFHVKDDCSKST
LQLSHDARDWGALRPTSPPSPRLDVVTPLVDFSALVPPADAEENDETILQ
KEINEALKSQGEEQQQQQRGADTAFPSFSSSSNAPSVIRHTPPSFPVATT
AAININDEARSFKKTSGTNSGSSTTEQRAAPYSKGPELFTSYFPHELGEE
EGAISPYLQKLHHQQQQQQQQQQQQKFQQSGGAAVAATAATAAATTTITA
APESPTDSSNSDDSNDSSDDNSTILDGRNASAPPKMKNSRKKKMK*

mRNA from alignment at scaffold_2:1158610..1163484-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1075 ID=mRNA_1075|Name=jgi.p|Nanoce1779_2|627461|organism=Nannochloropsis oceanica|type=mRNA|length=4875bp|location=Sequence derived from alignment at scaffold_2:1158610..1163484- (Nannochloropsis oceanica)
CAGAAATGGGACTCCCAAATGTCCCGGGCGGGCGACCAGGACGACGACGG
CATGATAGTTCAAGGAGCGCTCCTCTGCTGTTGTGCCTTGCTGCCGCCGC
CGCCGACTCCCACATGCTGCTGCTACCCCGCCATGTCATGGCTGCCGGCA
GTCCGAGCCTCACAAGTACACCTACAGCTTATGTCCTATCTTCCTTCCAC
CTTGGCTCCAGATTGCTGCAGAAGAGGCCTTTGCAACAACAAAAGACGAG
TATATCATCTACATCATCAGTGCCATCACGCCTTTCAACGACGTCAACCA
CGTCGACACAGCGAAAGTCCATCATGCCCGACGATTACTCAGGTCAACAG
CATGAACGCTTGACCTCCGCTCCTTCCTGGCGCAAGGCGGAGCAAGTCAA
GCAACCGTCAGCCCTCGAAAGTGCCTTGTGGAACTTGCCAGGCATGGCTT
GGTCCGGCGTTTCTTCCGCCCACGCCGGCCTCGTCAACCTAACGGGCTCT
GTGGCAGGCGGCGTCGTGTCAGGCTTTAACGCCGTTGTAAATCCTGTGGC
TGCTGCTTCGGCGACTACGATTACGAATACAATGGGGGCGGCTGCACGGA
ATGGGCGGGGACCCGGAGGGGAGGGAGCCGGCAGTGTACAGAGTCCGAGT
GGCACTAATCAACCGCATGAACTCTATGGTGATGATGGTGAGGAGCTCTT
CAGTCAAGAAGGGGAAGATGATGGTTTTTTTGCGCCGGTGCATGCGTACG
ATGATTCGTTGGAGTTGGTCGTGTGGGATGATGCCACGCTTTACGTGCCA
CCGCCGGATGTGGTAGCTGTCGAGGGACGGGAGGACGACTCACCCATCAT
GAGTCAATTGCAGAATGAGGTGGCTCAGATGCTGGGTAAAACACCTCCAT
CGCCGTCTCCGCGTGGGCCGAAGAAGAATGGGAACAAAGAGCAAATGAGG
GAAAGGAAGGCGCAGCAGCATGCACCAGTATGTGCTGACAGCAATTCTTT
GAGTGTGGCACATTCCAATGACGAGGACAAATCCTATGACACCCTCCACA
ATCGACGTAGTGCTACCGCCCGCCTTCTTGGTCAGGCTGCCCAAAAGGCT
GCCGCTGCTGGTTATCTTGCTGTTCAAGCCGTGTTGATGTGTGCTGCTGC
CCTCATCCAGGGGCCTCAGCAAAGAGCTCTGCAGCTCGCGCACGTGGTGG
ATGTGACTTTACGAGCCATGATTGCGACCCTCGCTTTGTATGGTGCCATT
ATCTCAACCTTCGTCCGTCGCGCCTTCGCTCCTAAAGCCAAAACCCTGCC
AAGGCCCGATGTCTTCCAAAGATTGACAACGACATTCACTCGTTTCCTGC
ATGCGAACTATCCTTGGCTGCTGGCCCACCCCATTTTCTACGGCCGCCCC
TTCCCCTGGCAATGGAAGGGATGGAAGCCTCAACGACCGTCTTCTGACCT
CTCCCGCTCCTCATTAAGTGAAAGCAGGATCCAGGGCTTGCCCACTCTTT
CCGCCCTCCTTCGTGACCTGGGCGATGCCGTCACGCCCCACAACCTCCTC
CAGAAAAAGCGCGAGCGTCGCGCCGAGGAACAGCAGCTGCAGCTTGACCA
GCTGCAGCCCTGGAATTTACCCTTTCATGTAAAGGATGACTGTTCGAAGT
CGACCTTACAGCTGAGCCATGATGCACGGGACTGGGGGGCGTTGAGGCCT
ACCTCTCCTCCCTCCCCACGTTTGGATGTCGTCACTCCACTGGTGGATTT
CTCGGCATTGGTTCCCCCTGCAGACGCAGAGGAAAATGATGAAACGATTC
TCCAGAAGGAGATTAATGAGGCATTGAAGTCCCAAGGAGAGGAGCAGCAG
CAGCAGCAGCGAGGAGCTGACACGGCTTTCCCGTCTTTTTCATCTTCCTC
TAACGCGCCCTCTGTCATACGTCACACACCTCCCTCCTTTCCAGTAGCGA
CGACAGCTGCGATTAACATAAATGATGAGGCGAGAAGTTTTAAGAAAACT
TCTGGCACCAACAGTGGCAGCAGCACAACGGAGCAAAGGGCGGCACCCTA
CAGCAAAGGCCCCGAGCTCTTCACTTCCTATTTTCCCCACGAACTCGGGG
AGGAGGAAGGGGCGATTTCTCCATATCTGCAAAAGCTGCACCACCAGCAG
CAGCAACAACAACAACAACAGCAGCAGCAGAAGTTTCAACAGTCAGGAGG
AGCAGCAGTGGCAGCGACAGCAGCAACAGCAGCGGCAACAACAACAATAA
CAGCTGCCCCAGAAAGTCCGACGGACAGCAGCAATAGCGACGACAGCAAC
GACAGCAGTGATGACAACAGTACCATTTTGGATGGAAGAAATGCCAGTGC
TCCTCCAAAAATGAAGGCAAGCTGGGCATCGGGTAAAATCGCCTCCGTCT
TCTCCGCTTCCAGCCGTAACAATACCACCAGCACCCGCCCTTCTTCCTCT
CATCTCTCCTCCTTCCCCTCCTCCCCTACAAACCTCGACAAATCCAAATC
CAAAGAACTCGCGCAAAAAGAAGATGAAATAGACGCCATCCGGGCTGCCC
AAGACTCAGCCTACGGTCGAATCCTGGCTGACCTCACCAGCACTCCAATG
GCCATCACAGAAGAAGACGTTGTTGACCCCCCTCCTGGTCTAAATTTTCG
AATGCCCTGGGCTGCGAGTGTGCCGAGCCTGGAGCAGATGGATAAGAAAA
TGGTGGTTTTGGCGGTAGAGTCTGCAAGGGCCGTGCAAAGCAAAACGCAA
CTCTGGAGATATATTGAGGAGATTGGAATAGCTCCCCTTCTGGCCGCCAT
CAAGAAAAGCTTTCATTCCACCGAGGAGGAAGCAGGTGGTAGCAGCAGTA
CCGACGGTAGTAGTAGCAGTATCAGCAGCAGCAGCAGCACGTCGTCATCT
TTTTCTCCTTCCTCTTATCCCTTTCCTCCGGGCTCGCCCTCCTTTGCTTT
TCCGTCCCTTGACGAGGCAACGGCAGGGGAAAAGGGGGTGTTGCGAACAC
AAGCAGTGGAAGCCATCTTACATCTCATGAACGTCGCAATAGATCTACGT
GTGCTCCGCGCTGCATTTGAAGAGGGTCCGGGCCTGGTGCTAGTGGTAGG
GCGAGAGGTTGTTTCTGACCTGATCGACATTGTGGAGGAGCCCTTGTTGT
TGCTTATGCCACGAATAATCCGTCCCCGGAACGACCAGCTTTTGTATAGA
GGGCAGAGAGCAGCGGTGGAGGTGTTGTTTCAACTAGTGTTGGCATCGGA
TAAGGCGATAACATTGATTCAGAACGATGGGAGGTTGTGGAATGCCTTGC
AGCAGATGACGGCTGAAGGGATGTATGCCTCCGAGAGCCCCACATATGCC
ACGTGCCATAAATTGTTGGCGGCGCTAGGGCACAATGAGTGGAGGCCACG
CCAGCCGGGCCAGAGGGGGTTGAGAATTCTATCCTTTGATGGGGGAGGGA
CACGGGGAGTGCTGTCGGTGGCGTTGTTGAAGCAGGTGATGGAGAGGGTA
GGGAAGGATGTGTTTGAGACGTTCGACGTCATCTGTGGGACAAGCACGGG
AGGGATCTTGGCCGTGTTGTTCGGGATTGAGAAGCGGACAATCAATGAGG
CGGAGGAGTTGTATGATAAACTGGTTAGCAAGATCTTCGCGTCATCCCCA
TTAATTCAAACGACCAAGTTGCTACTGCGCACGAGCTATTATGACGAGGT
GGTGTGGGAGCAGGTACGTTTCCAGTGGATTATCTTGCTTCGCGTTCGCT
CCTGAGCACGTTCCTCCATTTGCTATGGCGTCTCATCCCGTCCCCCCCCC
TCTCCTTGCCTCTTCTCCCATTTCCACTCTCCAGGTGCTGCAAGAAATGC
TAGGGGACGATTTGATGATCGATTCCATGGGCGAGGGCCCCCTGTCACCC
AAAGTTTTCTGTGCTTCGCTCTCTCTGAAGACCAATCCAGCTTCCCTCTA
CATTTGGAGGTACGTTTACGCCTGAGATAACCTTCCCTCCCTCCCTCCCT
CCCTCCCTCCTCCCTCGTCCGTTCATTTCATGCCTCCAATCAAAAGCTAT
ATTTCGGCTCCCTCACAAGCCTTCCCCCTTCCCTTCCTCCCTCCCCTCCC
CAGAAACTACGCCTACGGCCCCGACCAAGAGCCTAAACACAGCGGCTCCT
TCCGAGTCATGGTGCGGGATGCTCTGCGAGCCACTACTGCTGCGCCCACC
TTCTTTTCGCCGTTGGAAAAAGACGATGCCAAATACTGTGATGGGGCTTT
TTTAGCGAACAATCCTACAGGTGCGTGCATACGATCCCCTCTGCTTCTTC
CTTTCTTGCCCTCATCAGATGATTTATACTTACCGACCCATCTTATCTCT
CCCTTGCCTCCTCCCACAGCCGTAGCTCTTAATGAGGTCCGCACACTTTA
TCCCGGTGTGCCTGTTGAGTGTGTGGTTTCGATTGGCACGGGCGTGCATG
TTGATAAACGGAAGTCCGACGGTGGGTACGGCTGGGAGGGGATCGTGAAT
GATCTGATTAATTGCGCGACCAACACGGAGGTGACGCATGAGACGCTGTC
GGTGTTTTTGCCCAAGAGCAAATATTACCGCTTTAATCCCCAGACTGAAT
TTTTCCCCTTGGACGAGACCAAGCCCGAGAGGCTCGCGAGGATGAAGCGG
ATTGCCCGCGAATATTTTTGGCAGAGTGAGAATAAGGAGAGGATGAATCA
GCTGGTGCAGTTGTTAAAGAAGGGGGGGAGCCCCTTACCGCACTTGAGGT
CGTCATTGCGGCCGTAGCGAAGGGACGCGAGGGAAGGGTGAGAGGGAGTG
CATGGATTCAATTTGGGCAACTCTTTGAAAAGAAGAGGAGGGAGAAGGGA
GGGAGGGAGGGAAGAATGAGTGAAG

Coding sequence (CDS) from alignment at scaffold_2:1158610..1163484-

>mRNA_1075 ID=mRNA_1075|Name=jgi.p|Nanoce1779_2|627461|organism=Nannochloropsis oceanica|type=CDS|length=4776bp|location=Sequence derived from alignment at scaffold_2:1158610..1163484- (Nannochloropsis oceanica)
AACTCGCGCAAAAAGAAGATGAAATAGATGGGACTCCCAAATGTCCCGGG
CGGGCGACCAGGACGACGACGGCATGATAGTTCAAGGAGCGCTCCTCTGC
TGTTGTGCCTTGCTGCCGCCGCCGCCGACTCCCACATGCTGCTGCTACCC
CGCCATGTCATGGCTGCCGGCAGTCCGAGCCTCACAAGTACACCTACAGC
TTATGTCCTATCTTCCTTCCACCTTGGCTCCAGATTGCTGCAGAAGAGGC
CTTTGCAACAACAAAAGACGAGTATATCATCTACATCATCAGTGCCATCA
CGCCTTTCAACGACGTCAACCACGTCGACACAGCGAAAGTCCATCATGCC
CGACGATTACTCAGGTCAACAGCATGAACGCTTGACCTCCGCTCCTTCCT
GGCGCAAGGCGGAGCAAGTCAAGCAACCGTCAGCCCTCGAAAGTGCCTTG
TGGAACTTGCCAGGCATGGCTTGGTCCGGCGTTTCTTCCGCCCACGCCGG
CCTCGTCAACCTAACGGGCTCTGTGGCAGGCGGCGTCGTGTCAGGCTTTA
ACGCCGTTGTAAATCCTGTGGCTGCTGCTTCGGCGACTACGATTACGAAT
ACAATGGGGGCGGCTGCACGGAATGGGCGGGGACCCGGAGGGGAGGGAGC
CGGCAGTGTACAGAGTCCGAGTGGCACTAATCAACCGCATGAACTCTATG
GTGATGATGGTGAGGAGCTCTTCAGTCAAGAAGGGGAAGATGATGGTTTT
TTTGCGCCGGTGCATGCGTACGATGATTCGTTGGAGTTGGTCGTGTGGGA
TGATGCCACGCTTTACGTGCCACCGCCGGATGTGGTAGCTGTCGAGGGAC
GGGAGGACGACTCACCCATCATGAGTCAATTGCAGAATGAGGTGGCTCAG
ATGCTGGGTAAAACACCTCCATCGCCGTCTCCGCGTGGGCCGAAGAAGAA
TGGGAACAAAGAGCAAATGAGGGAAAGGAAGGCGCAGCAGCATGCACCAG
TATGTGCTGACAGCAATTCTTTGAGTGTGGCACATTCCAATGACGAGGAC
AAATCCTATGACACCCTCCACAATCGACGTAGTGCTACCGCCCGCCTTCT
TGGTCAGGCTGCCCAAAAGGCTGCCGCTGCTGGTTATCTTGCTGTTCAAG
CCGTGTTGATGTGTGCTGCTGCCCTCATCCAGGGGCCTCAGCAAAGAGCT
CTGCAGCTCGCGCACGTGGTGGATGTGACTTTACGAGCCATGATTGCGAC
CCTCGCTTTGTATGGTGCCATTATCTCAACCTTCGTCCGTCGCGCCTTCG
CTCCTAAAGCCAAAACCCTGCCAAGGCCCGATGTCTTCCAAAGATTGACA
ACGACATTCACTCGTTTCCTGCATGCGAACTATCCTTGGCTGCTGGCCCA
CCCCATTTTCTACGGCCGCCCCTTCCCCTGGCAATGGAAGGGATGGAAGC
CTCAACGACCGTCTTCTGACCTCTCCCGCTCCTCATTAAGTGAAAGCAGG
ATCCAGGGCTTGCCCACTCTTTCCGCCCTCCTTCGTGACCTGGGCGATGC
CGTCACGCCCCACAACCTCCTCCAGAAAAAGCGCGAGCGTCGCGCCGAGG
AACAGCAGCTGCAGCTTGACCAGCTGCAGCCCTGGAATTTACCCTTTCAT
GTAAAGGATGACTGTTCGAAGTCGACCTTACAGCTGAGCCATGATGCACG
GGACTGGGGGGCGTTGAGGCCTACCTCTCCTCCCTCCCCACGTTTGGATG
TCGTCACTCCACTGGTGGATTTCTCGGCATTGGTTCCCCCTGCAGACGCA
GAGGAAAATGATGAAACGATTCTCCAGAAGGAGATTAATGAGGCATTGAA
GTCCCAAGGAGAGGAGCAGCAGCAGCAGCAGCGAGGAGCTGACACGGCTT
TCCCGTCTTTTTCATCTTCCTCTAACGCGCCCTCTGTCATACGTCACACA
CCTCCCTCCTTTCCAGTAGCGACGACAGCTGCGATTAACATAAATGATGA
GGCGAGAAGTTTTAAGAAAACTTCTGGCACCAACAGTGGCAGCAGCACAA
CGGAGCAAAGGGCGGCACCCTACAGCAAAGGCCCCGAGCTCTTCACTTCC
TATTTTCCCCACGAACTCGGGGAGGAGGAAGGGGCGATTTCTCCATATCT
GCAAAAGCTGCACCACCAGCAGCAGCAACAACAACAACAACAGCAGCAGC
AGAAGTTTCAACAGTCAGGAGGAGCAGCAGTGGCAGCGACAGCAGCAACA
GCAGCGGCAACAACAACAATAACAGCTGCCCCAGAAAGTCCGACGGACAG
CAGCAATAGCGACGACAGCAACGACAGCAGTGATGACAACAGTACCATTT
TGGATGGAAGAAATGCCAGTGCTCCTCCAAAAATGAAGAACTCGCGCAAA
AAGAAGATGAAATAGATGGGACTCCCAAATGTCCCGGGCGGGCGACCAGG
ACGACGACGGCATGATAGTTCAAGGAGCGCTCCTCTGCTGTTGTGCCTTG
CTGCCGCCGCCGCCGACTCCCACATGCTGCTGCTACCCCGCCATGTCATG
GCTGCCGGCAGTCCGAGCCTCACAAGTACACCTACAGCTTATGTCCTATC
TTCCTTCCACCTTGGCTCCAGATTGCTGCAGAAGAGGCCTTTGCAACAAC
AAAAGACGAGTATATCATCTACATCATCAGTGCCATCACGCCTTTCAACG
ACGTCAACCACGTCGACACAGCGAAAGTCCATCATGCCCGACGATTACTC
AGGTCAACAGCATGAACGCTTGACCTCCGCTCCTTCCTGGCGCAAGGCGG
AGCAAGTCAAGCAACCGTCAGCCCTCGAAAGTGCCTTGTGGAACTTGCCA
GGCATGGCTTGGTCCGGCGTTTCTTCCGCCCACGCCGGCCTCGTCAACCT
AACGGGCTCTGTGGCAGGCGGCGTCGTGTCAGGCTTTAACGCCGTTGTAA
ATCCTGTGGCTGCTGCTTCGGCGACTACGATTACGAATACAATGGGGGCG
GCTGCACGGAATGGGCGGGGACCCGGAGGGGAGGGAGCCGGCAGTGTACA
GAGTCCGAGTGGCACTAATCAACCGCATGAACTCTATGGTGATGATGGTG
AGGAGCTCTTCAGTCAAGAAGGGGAAGATGATGGTTTTTTTGCGCCGGTG
CATGCGTACGATGATTCGTTGGAGTTGGTCGTGTGGGATGATGCCACGCT
TTACGTGCCACCGCCGGATGTGGTAGCTGTCGAGGGACGGGAGGACGACT
CACCCATCATGAGTCAATTGCAGAATGAGGTGGCTCAGATGCTGGGTAAA
ACACCTCCATCGCCGTCTCCGCGTGGGCCGAAGAAGAATGGGAACAAAGA
GCAAATGAGGGAAAGGAAGGCGCAGCAGCATGCACCAGTATGTGCTGACA
GCAATTCTTTGAGTGTGGCACATTCCAATGACGAGGACAAATCCTATGAC
ACCCTCCACAATCGACGTAGTGCTACCGCCCGCCTTCTTGGTCAGGCTGC
CCAAAAGGCTGCCGCTGCTGGTTATCTTGCTGTTCAAGCCGTGTTGATGT
GTGCTGCTGCCCTCATCCAGGGGCCTCAGCAAAGAGCTCTGCAGCTCGCG
CACGTGGTGGATGTGACTTTACGAGCCATGATTGCGACCCTCGCTTTGTA
TGGTGCCATTATCTCAACCTTCGTCCGTCGCGCCTTCGCTCCTAAAGCCA
AAACCCTGCCAAGGCCCGATGTCTTCCAAAGATTGACAACGACATTCACT
CGTTTCCTGCATGCGAACTATCCTTGGCTGCTGGCCCACCCCATTTTCTA
CGGCCGCCCCTTCCCCTGGCAATGGAAGGGATGGAAGCCTCAACGACCGT
CTTCTGACCTCTCCCGCTCCTCATTAAGTGAAAGCAGGATCCAGGGCTTG
CCCACTCTTTCCGCCCTCCTTCGTGACCTGGGCGATGCCGTCACGCCCCA
CAACCTCCTCCAGAAAAAGCGCGAGCGTCGCGCCGAGGAACAGCAGCTGC
AGCTTGACCAGCTGCAGCCCTGGAATTTACCCTTTCATGTAAAGGATGAC
TGTTCGAAGTCGACCTTACAGCTGAGCCATGATGCACGGGACTGGGGGGC
GTTGAGGCCTACCTCTCCTCCCTCCCCACGTTTGGATGTCGTCACTCCAC
TGGTGGATTTCTCGGCATTGGTTCCCCCTGCAGACGCAGAGGAAAATGAT
GAAACGATTCTCCAGAAGGAGATTAATGAGGCATTGAAGTCCCAAGGAGA
GGAGCAGCAGCAGCAGCAGCGAGGAGCTGACACGGCTTTCCCGTCTTTTT
CATCTTCCTCTAACGCGCCCTCTGTCATACGTCACACACCTCCCTCCTTT
CCAGTAGCGACGACAGCTGCGATTAACATAAATGATGAGGCGAGAAGTTT
TAAGAAAACTTCTGGCACCAACAGTGGCAGCAGCACAACGGAGCAAAGGG
CGGCACCCTACAGCAAAGGCCCCGAGCTCTTCACTTCCTATTTTCCCCAC
GAACTCGGGGAGGAGGAAGGGGCGATTTCTCCATATCTGCAAAAGCTGCA
CCACCAGCAGCAGCAACAACAACAACAACAGCAGCAGCAGAAGTTTCAAC
AGTCAGGAGGAGCAGCAGTGGCAGCGACAGCAGCAACAGCAGCGGCAACA
ACAACAATAACAGCTGCCCCAGAAAGTCCGACGGACAGCAGCAATAGCGA
CGACAGCAACGACAGCAGTGATGACAACAGTACCATTTTGGATGGAAGAA
ATGCCAGTGCTCCTCCAAAAATGAAG

Synonyms

Publications