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Properties
| Property Name | Value |
|---|
| TranscriptId | 613475 |
| Track | FilteredModels2 |
| ProteinId | 613389 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_73 | supercontig | scaffold_73:43492..45152 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10742 ID=mRNA_10742|Name=jgi.p|Nanoce1779_2|613389|organism=Nannochloropsis oceanica|type=mRNA|length=1537bp
ACAGGCGTGCCAGCACGACTGAGAACGTCAATGCACGCCCAGATGCAACA
AAAGCAACAGCAACAGCGGTGGCCGTCACCACACCAGCAAGGGGGTATGC
AGTACATGTTGGCAATGAGAGACACGGTATTAACAGTAGCAAAAATAGCA
ACTGCAGCAACAGCAGCAACGGAATGGAGGTTGGCGAGGGAGGTAGGAAG
TGGAAATTTGGCGGTCTTAGATGAGTGAGGAAGAATGTGGAGGATGGATG
GATTGGAGGATGTGGGAAGAGATGGAATTGGAGAGAAAAGACAACTATTC
TTAATTTTTGGCCTCATGTTTGGGTAGAATGCCGAGAAAGAGAAATGGAG
GAGGGCGAGGGAGATTCGACCAGAGAAGGTCAGGGAAACTTCTTGGTCAG
GAAAAGGATGGGGCATACAATTCTCGCTCATGTGGGTAGCGGATTCTTAC
GGAGATAAGACTTAGGGTAAAAAAAAAACCGTGACTTCGACGATAGGTTG
GCATTCATTTATAATAGTACTGCCATGCCACCACCATCGCCACCACCCTG
GCTTCACCATCTTATCCTCTGCGTCGTCGTTGTCCTTTCCCTGCTTCTCC
TCCCCCCTGCTGATGGCTTCTTTCCCCGCTCTCCCTTTTCGTCGTCCCCT
ACTACAATCTCTTTCCTTCCCTTCCCCCAGCTTGGCCTTGGCGTCCGCTT
GACCACGCCCACGTACACAACCTTTCTCAACCCTCATGCTGGCGTCCATA
GCTTCTTCATGGCTGCCATGGACAGTGTATCCGCCGATACAGATGACGGC
TGCGAAGATGAGTGGGTCGAGTCTCCATGTCCCTGTACGGAATTGGGCCT
GGGCTCTGGCGCTGCCGGTCCTTTGACCGACAGATGTAATGTAGGAGATG
TCGTCGTCCTCGTTCATTCGCCCTCTTTCCCGGGTGTTCCTTCTCCCCTA
GTTCTTGCCGTGGTTGACGGGCCCAACGAAGTGTGCCTGTTGTGTATGCG
AGGTCTGAAATGGTACAGGGACTGTCGAGACGAGGTCAATGTCTTGACAA
ACGTATCGTCTACGGCGTTGGTGCGTGTGCTTAGTGATGCCCATTACAGC
CCCAGAAATATGTCCTCGAATGGAGGAGCGATACAAATGGGGTATGAAGC
CAGTGCTGTAGATTGTTGGTTAATAGATGAGGAGGATCTGCCGGATGGGC
TGGGACGATCCCTCGACTGACTTGGCGCAGAGCGCTAGCACCGTGGAGTG
AGGTCTTCTTCGGGGCAGGGAAGCAGGGATGTAAAGAGAGAGAAGCTTAA
ACGCGGTATTGAAGTCCGGGAAAACTGTGGTGAAGTCTCCAAGCTTGTCT
TGAAAGAAACAAAGTAATTCTGCGACACGTAAAAGCATCCAGGGATTGGA
CCGTGGTCGATTACGACTCAGTATGGTAATGCTGCTTTGTACAGTCAACC
CCCTCTCCCTCCTTTCCTCCCTCTTTCTGCTCAGTCCGTGCCCTCATCAT
TCGCCTCCTCCACCCACGCCGCCCCCTCCCCCTCCCG back to topprotein sequence of jgi.p|Nanoce1779_2|613389 >mRNA_10742-protein ID=mRNA_10742-protein|Name=jgi.p|Nanoce1779_2|613389|organism=Nannochloropsis oceanica|type=polypeptide|length=232bp
MPPPSPPPWLHHLILCVVVVLSLLLLPPADGFFPRSPFSSSPTTISFLPF
PQLGLGVRLTTPTYTTFLNPHAGVHSFFMAAMDSVSADTDDGCEDEWVES
PCPCTELGLGSGAAGPLTDRCNVGDVVVLVHSPSFPGVPSPLVLAVVDGP
NEVCLLCMRGLKWYRDCRDEVNVLTNVSSTALVRVLSDAHYSPRNMSSNG
GAIQMGYEASAVDCWLIDEEDLPDGLGRSLD* back to topmRNA from alignment at scaffold_73:43492..45152+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10742 ID=mRNA_10742|Name=jgi.p|Nanoce1779_2|613389|organism=Nannochloropsis oceanica|type=mRNA|length=1661bp|location=Sequence derived from alignment at scaffold_73:43492..45152+ (Nannochloropsis oceanica)
ACAGGCGTGCCAGCACGACTGAGAACGTCAATGCACGCCCAGATGCAACA
AAAGCAACAGCAACAGCGGTGGCCGTCACCACACCAGCAAGGGGGTATGC
AGTACATGTTGGCAATGAGAGACACGGTATTAACAGTAGCAAAAATAGCA
ACTGCAGCAACAGCAGCAACGGAATGGAGGTTGGCGAGGGAGGTAGGAAG
TGGAAATTTGGCGGTCTTAGATGAGTGAGGAAGAATGTGGAGGATGGATG
GATTGGAGGATGTGGGAAGAGATGGAATTGGAGAGAAAAGACAACTATTC
TTAATTTTTGGCCTCATGTTTGGGTAGAATGCCGAGAAAGAGAAATGGAG
GAGGGCGAGGGAGATTCGACCAGAGAAGGTCAGGGAAACTTCTTGGTCAG
GAAAAGGATGGGGCATACAATTCTCGCTCATGTGGGTAGCGGATTCTTAC
GGAGATAAGACTTAGGGTAAAAAAAAAACCGTGACTTCGACGATAGGTTG
GCATTCATTTATAATGTAAGGGTCTATGTCTTGCATGCGTGTGGGAGTTT
TCTTTTTGAGGGGGGTTTGAGGGGGACGTAAAAACCTGCTTCGACTTTCG
TTCATCTATAATTCATCGCACAACCCTCCGCATGCACAGAGTACTGCCAT
GCCACCACCATCGCCACCACCCTGGCTTCACCATCTTATCCTCTGCGTCG
TCGTTGTCCTTTCCCTGCTTCTCCTCCCCCCTGCTGATGGCTTCTTTCCC
CGCTCTCCCTTTTCGTCGTCCCCTACTACAATCTCTTTCCTTCCCTTCCC
CCAGCTTGGCCTTGGCGTCCGCTTGACCACGCCCACGTACACAACCTTTC
TCAACCCTCATGCTGGCGTCCATAGCTTCTTCATGGCTGCCATGGACAGT
GTATCCGCCGATACAGATGACGGCTGCGAAGATGAGTGGGTCGAGTCTCC
ATGTCCCTGTACGGAATTGGGCCTGGGCTCTGGCGCTGCCGGTCCTTTGA
CCGACAGATGTAATGTAGGAGATGTCGTCGTCCTCGTTCATTCGCCCTCT
TTCCCGGGTGTTCCTTCTCCCCTAGTTCTTGCCGTGGTTGACGGGCCCAA
CGAAGTGTGCCTGTTGTGTATGCGAGGTCTGAAATGGTACAGGGACTGTC
GAGACGAGGTCAATGTCTTGACAAACGTATCGTCTACGGCGTTGGTGCGT
GTGCTTAGTGATGCCCATTACAGCCCCAGAAATATGTCCTCGAATGGAGG
AGCGATACAAATGGGGTATGAAGCCAGTGCTGTAGATTGTTGGTTAATAG
ATGAGGAGGATCTGCCGGATGGGCTGGGACGATCCCTCGACTGACTTGGC
GCAGAGCGCTAGCACCGTGGAGTGAGGTCTTCTTCGGGGCAGGGAAGCAG
GGATGTAAAGAGAGAGAAGCTTAAACGCGGTATTGAAGTCCGGGAAAACT
GTGGTGAAGTCTCCAAGCTTGTCTTGAAAGAAACAAAGTAATTCTGCGAC
ACGTAAAAGCATCCAGGGATTGGACCGTGGTCGATTACGACTCAGTATGG
TAATGCTGCTTTGTACAGTCAACCCCCTCTCCCTCCTTTCCTCCCTCTTT
CTGCTCAGTCCGTGCCCTCATCATTCGCCTCCTCCACCCACGCCGCCCCC
TCCCCCTCCCG back to topCoding sequence (CDS) from alignment at scaffold_73:43492..45152+ >mRNA_10742 ID=mRNA_10742|Name=jgi.p|Nanoce1779_2|613389|organism=Nannochloropsis oceanica|type=CDS|length=696bp|location=Sequence derived from alignment at scaffold_73:43492..45152+ (Nannochloropsis oceanica)
ATGCCACCACCATCGCCACCACCCTGGCTTCACCATCTTATCCTCTGCGT
CGTCGTTGTCCTTTCCCTGCTTCTCCTCCCCCCTGCTGATGGCTTCTTTC
CCCGCTCTCCCTTTTCGTCGTCCCCTACTACAATCTCTTTCCTTCCCTTC
CCCCAGCTTGGCCTTGGCGTCCGCTTGACCACGCCCACGTACACAACCTT
TCTCAACCCTCATGCTGGCGTCCATAGCTTCTTCATGGCTGCCATGGACA
GTGTATCCGCCGATACAGATGACGGCTGCGAAGATGAGTGGGTCGAGTCT
CCATGTCCCTGTACGGAATTGGGCCTGGGCTCTGGCGCTGCCGGTCCTTT
GACCGACAGATGTAATGTAGGAGATGTCGTCGTCCTCGTTCATTCGCCCT
CTTTCCCGGGTGTTCCTTCTCCCCTAGTTCTTGCCGTGGTTGACGGGCCC
AACGAAGTGTGCCTGTTGTGTATGCGAGGTCTGAAATGGTACAGGGACTG
TCGAGACGAGGTCAATGTCTTGACAAACGTATCGTCTACGGCGTTGGTGC
GTGTGCTTAGTGATGCCCATTACAGCCCCAGAAATATGTCCTCGAATGGA
GGAGCGATACAAATGGGGTATGAAGCCAGTGCTGTAGATTGTTGGTTAAT
AGATGAGGAGGATCTGCCGGATGGGCTGGGACGATCCCTCGACTGA back to top
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