jgi.p|Nanoce1779_2|570110, mRNA_10739 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|570110
Unique NamemRNA_10739
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length771
Alignment locationscaffold_73:40962..41732 -

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Properties
Property NameValue
TranscriptId570196
TrackFilteredModels2
ProteinId570110
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_73supercontigscaffold_73:40962..41732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|570110gene_10739Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_10739CDS_10739Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|570110mRNA_10739-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_10739 ID=mRNA_10739|Name=jgi.p|Nanoce1779_2|570110|organism=Nannochloropsis oceanica|type=mRNA|length=771bp
ATGGAGGACGAGTACGAGGGCGAGGACGGGGAAGGGACGGACACGTTTGA
TACAGGCAGCGCCGGCCTCCATCACCACCAAAACACCATCACGACCAACA
ATGATGTCATCGCGCAGCAGCAGTCACAGTACGAGGGGCAAGGAGGAGGA
GAAGGAGTAGGGATGCTTCAAGGGGGCAATGGGCTGCCCTTCGGCTCGAT
TGACATGTCTGGTGCCGCGTTCGCCTCGTCGGCCTTTCCGAACGCCGCCG
CGTCGGGGATTTCGGAGTCGGTGGCTTCCACTGCCGAGGCTACGGAAATA
GGGAGGAAAGTGGGAGGAGGAGGAGAAGGAAACGGCAGTGGGGGCGAGGG
GGGATCACGCAGGAGGAGGGGGAGGAGGGGGAATGGCCATAAGGAGGGAG
GGAAGGGGCACCGCCACCACGCCAAGACGAGGAGCTGGGGAGGGAGTGGG
AGGCTGATAGTGGAAAGCGGCGGGAAGGACGGCGAGAGAGAGAAGAAGGA
GCAGGAGGAGCAGCTGGAAGTGGGGAATGGGGCATTGCCGTGGCTCTTGC
CGTCGTCGCCGCGGGAGGGGGGGCGGCTGGCGGTGGTGGAGTTACCAGCA
CAGGGGGATGGCGGGGGATACGAATTGGTGGGGACCCTCTTCAAGCGGAG
GGGAGGCATTGGCCGACTCTTAGGATGGAAGCCGCGGTTGTTCACGCTGT
ACAAAGGCAAGCTCTGTTACTACGAGGCGGAGATCCTGGAGGAGGTGGAC
AACCGCAGCAAACCCAGGTAA
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protein sequence of jgi.p|Nanoce1779_2|570110

>mRNA_10739-protein ID=mRNA_10739-protein|Name=jgi.p|Nanoce1779_2|570110|organism=Nannochloropsis oceanica|type=polypeptide|length=257bp
MEDEYEGEDGEGTDTFDTGSAGLHHHQNTITTNNDVIAQQQSQYEGQGGG
EGVGMLQGGNGLPFGSIDMSGAAFASSAFPNAAASGISESVASTAEATEI
GRKVGGGGEGNGSGGEGGSRRRRGRRGNGHKEGGKGHRHHAKTRSWGGSG
RLIVESGGKDGEREKKEQEEQLEVGNGALPWLLPSSPREGGRLAVVELPA
QGDGGGYELVGTLFKRRGGIGRLLGWKPRLFTLYKGKLCYYEAEILEEVD
NRSKPR*
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mRNA from alignment at scaffold_73:40962..41732-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10739 ID=mRNA_10739|Name=jgi.p|Nanoce1779_2|570110|organism=Nannochloropsis oceanica|type=mRNA|length=771bp|location=Sequence derived from alignment at scaffold_73:40962..41732- (Nannochloropsis oceanica)
ATGGAGGACGAGTACGAGGGCGAGGACGGGGAAGGGACGGACACGTTTGA
TACAGGCAGCGCCGGCCTCCATCACCACCAAAACACCATCACGACCAACA
ATGATGTCATCGCGCAGCAGCAGTCACAGTACGAGGGGCAAGGAGGAGGA
GAAGGAGTAGGGATGCTTCAAGGGGGCAATGGGCTGCCCTTCGGCTCGAT
TGACATGTCTGGTGCCGCGTTCGCCTCGTCGGCCTTTCCGAACGCCGCCG
CGTCGGGGATTTCGGAGTCGGTGGCTTCCACTGCCGAGGCTACGGAAATA
GGGAGGAAAGTGGGAGGAGGAGGAGAAGGAAACGGCAGTGGGGGCGAGGG
GGGATCACGCAGGAGGAGGGGGAGGAGGGGGAATGGCCATAAGGAGGGAG
GGAAGGGGCACCGCCACCACGCCAAGACGAGGAGCTGGGGAGGGAGTGGG
AGGCTGATAGTGGAAAGCGGCGGGAAGGACGGCGAGAGAGAGAAGAAGGA
GCAGGAGGAGCAGCTGGAAGTGGGGAATGGGGCATTGCCGTGGCTCTTGC
CGTCGTCGCCGCGGGAGGGGGGGCGGCTGGCGGTGGTGGAGTTACCAGCA
CAGGGGGATGGCGGGGGATACGAATTGGTGGGGACCCTCTTCAAGCGGAG
GGGAGGCATTGGCCGACTCTTAGGATGGAAGCCGCGGTTGTTCACGCTGT
ACAAAGGCAAGCTCTGTTACTACGAGGCGGAGATCCTGGAGGAGGTGGAC
AACCGCAGCAAACCCAGGTAA
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Coding sequence (CDS) from alignment at scaffold_73:40962..41732-

>mRNA_10739 ID=mRNA_10739|Name=jgi.p|Nanoce1779_2|570110|organism=Nannochloropsis oceanica|type=CDS|length=771bp|location=Sequence derived from alignment at scaffold_73:40962..41732- (Nannochloropsis oceanica)
ATGGAGGACGAGTACGAGGGCGAGGACGGGGAAGGGACGGACACGTTTGA
TACAGGCAGCGCCGGCCTCCATCACCACCAAAACACCATCACGACCAACA
ATGATGTCATCGCGCAGCAGCAGTCACAGTACGAGGGGCAAGGAGGAGGA
GAAGGAGTAGGGATGCTTCAAGGGGGCAATGGGCTGCCCTTCGGCTCGAT
TGACATGTCTGGTGCCGCGTTCGCCTCGTCGGCCTTTCCGAACGCCGCCG
CGTCGGGGATTTCGGAGTCGGTGGCTTCCACTGCCGAGGCTACGGAAATA
GGGAGGAAAGTGGGAGGAGGAGGAGAAGGAAACGGCAGTGGGGGCGAGGG
GGGATCACGCAGGAGGAGGGGGAGGAGGGGGAATGGCCATAAGGAGGGAG
GGAAGGGGCACCGCCACCACGCCAAGACGAGGAGCTGGGGAGGGAGTGGG
AGGCTGATAGTGGAAAGCGGCGGGAAGGACGGCGAGAGAGAGAAGAAGGA
GCAGGAGGAGCAGCTGGAAGTGGGGAATGGGGCATTGCCGTGGCTCTTGC
CGTCGTCGCCGCGGGAGGGGGGGCGGCTGGCGGTGGTGGAGTTACCAGCA
CAGGGGGATGGCGGGGGATACGAATTGGTGGGGACCCTCTTCAAGCGGAG
GGGAGGCATTGGCCGACTCTTAGGATGGAAGCCGCGGTTGTTCACGCTGT
ACAAAGGCAAGCTCTGTTACTACGAGGCGGAGATCCTGGAGGAGGTGGAC
AACCGCAGCAAACCCAGGTAA
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Synonyms
Publications