Properties
| Property Name | Value |
|---|
| TranscriptId | 408597 |
| Track | FilteredModels2 |
| ProteinId | 408511 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_73 | supercontig | scaffold_73:37194..39137 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10738 ID=mRNA_10738|Name=jgi.p|Nanoce1779_2|408511|organism=Nannochloropsis oceanica|type=mRNA|length=1169bp
GGGGGAGGGGAGGAATAAGGGGAGAAAAGGTAAACTCAAAATGCATGGAC
TCACCTCTTCCTCCTTTTATTCTTCCATTCTTCCCTCCCTCTAAAGACGA
CTGCCCCTCCTCCCTCCCGCATGCCGCCCGTGGGCTCCACCATCCCTCGC
TGTCCTGCCGAGGTGGCGGGTGAGGGGGAGGGGTACGAGATGCCTCCCCA
CACGTGGACGACGGGCCTAGCGAGCAATATCAGGGTCCGCGCTCGGGGTT
ACAAGCAAAGCGGCAAAAAGGAGCCGTCGGCGGCGTCTCTCTACAAGCTC
GTCAACTTCGACTTTGTCCGCTCCCCATCCCGGGTCTCGCATGTCGCAAG
TTTGGTGCAGGATCTTCCGGAGGTGAAGGGATTGGAAGGCCTGCCTGCTC
ACATCCCAAAAACTCTGGTCGTCACGTGGCAGGCTCCCTCGGAGAAGCCT
TCCCTCCTCGCGCAAGAGGACGGTCCCGGCTGGTCTTGTATACTCTACTT
CGTCATCAAGCCTGACACCGCCCTTGCGTACATCAAGGGCGAGGAGGAGG
GAGGGAAGGAGGGAGGGGTGGCGATGACGGCGGGGATGAAGCTATTTGGC
GAGTTCATGCGGAATGCAGTGCCGGTGGATGGAGGCGCCACCCCATCCCC
TCTCGCTTTGGAATGGCGCGAGCGCTTCAAGGCAATTTGTTTGTGTAAAA
ACATGGATGAGCTTGGATTGCCGTCGTTTATAGCGCAGGTACACAAGGAG
GGAGAGAAGGAGGGAAAGGTGTTGGAGTGTGTGAGATTCGGAAGGAATTG
AAATTTTCCTTGATTTTCGCGCAATAAGAGAGGTTGGGAAAGAGAGAAGG
AGGGAGGAAAGGAGAGAGTGGGTGCAAAGAGCGCACGGGTATTGTACAGT
CGTTTGCATCTTTCATGCTATTTACCCTTCCCCCCCTTCATCTCCCCCCT
CCTCCCTCCTCTCCTCCAGTGCAACGGCAAGCCCATCCTGGTGAAGCACA
CGGCCAAGTACTACAGGGGCAAGGATTACGTCGAGATTGACATCAACATG
CACAAATTTGCCTATTTGGCCCGCAAAGGTATCTCCCTCCCTCCCTCTTT
CCCTCCCTCTCTTCCTTTCCTCCCTGCCCCCCTTCTTTTTCTGCAGGAGC
GGTAGACACTCACGCGTTT back to topprotein sequence of jgi.p|Nanoce1779_2|408511 >mRNA_10738-protein ID=mRNA_10738-protein|Name=jgi.p|Nanoce1779_2|408511|organism=Nannochloropsis oceanica|type=polypeptide|length=227bp
MPPVGSTIPRCPAEVAGEGEGYEMPPHTWTTGLASNIRVRARGYKQSGKK
EPSAASLYKLVNFDFVRSPSRVSHVASLVQDLPEVKGLEGLPAHIPKTLV
VTWQAPSEKPSLLAQEDGPGWSCILYFVIKPDTALAYIKGEEEGGKEGGV
AMTAGMKLFGEFMRNAVPVDGGATPSPLALEWRERFKAICLCKNMDELGL
PSFIAQVHKEGEKEGKVLECVRFGRN* back to topmRNA from alignment at scaffold_73:37194..39137- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10738 ID=mRNA_10738|Name=jgi.p|Nanoce1779_2|408511|organism=Nannochloropsis oceanica|type=mRNA|length=1944bp|location=Sequence derived from alignment at scaffold_73:37194..39137- (Nannochloropsis oceanica)
GGGGGAGGGGAGGAATAAGGGGAGAAAAGGTAAACTCAAAATGCATGGAC
TCACCTCTTCCTCCTTTTATTCTTCCATTCTTCCCTCCCTCTAAAGACGA
CTGCCCCTCCTCCCTCCCGCATGCCGCCCGTGGGCTCCACCATCCCTCGC
TGTCCTGCCGAGGTGGCGGGTGAGGGGGAGGGGTACGAGATGCCTCCCCA
CACGTGGACGACGGGCCTAGCGAGCAATATCAGGGTGAGGAAGGGGGGAG
GGAGGGAAGGAGGGAGAGAAGGAAGGAGGGAGGGAAGGAGGGAGGAAACG
AAGGAGGGAGAAAAGGAGGGAGGGTGCGAGGGCAGATCTTTTTTTGGCTC
GTCCGTGGCGTGTGGACAAGCTTAATTGACCACCCCCTTTCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTACCCATCCAGG
TCCGCGCTCGGGGTTACAAGCAAAGCGGCAAAAAGGAGCCGTCGGCGGCG
TCTCTCTACAAGCTCGTCAACTTCGACTTTGTCCGCTCCCCATCCCGGGT
CTCGCATGTCGCAAGTTTGGTGCAGGTAAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGCA
AGCAGCAGTCCCCATCCCGGGTCTCGCATGTCGCAAGTTTGGTGCAGGTA
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGCAAG
CAGCCTGGGATACATAATGGCTGTGTGCCATGCCATGCCATGCCATGCCT
CAAACTCGTTTCCTCCTCCCCCCCTCCCCAGGATCTTCCGGAGGTGAAGG
GATTGGAAGGCCTGCCTGCTCACATCCCAAAAACTCTGGTCGTCACGTGG
CAGGTGAATAGGGGGGAAAAGAGGGAGTGAAGGATGGGAGGAATCTGTAG
TTTGCCTTCGGTTGTCCAACTGCTTTCTCGTGCTTATCCGTTTTTCCTTT
GTCCTCTACCTTCCCTCTCACCCAACCCTCCCTCCCGCCCTCCCTTCTCA
GGCTCCCTCGGAGAAGCCTTCCCTCCTCGCGCAAGAGGACGGTCCCGGCT
GGTCTTGTATACTCTACTTCGTCATCAAGCCTGACACCGCCCTTGCGTAC
ATCAAGGGCGAGGAGGAGGGAGGGAAGGAGGGAGGGGTGGCGATGACGGC
GGGGATGAAGCTATTTGGCGAGTTCATGCGGAATGCAGTGCCGGTGGATG
GAGGTGAGGAGGGGAGGGAGGAAGGGAGGGAGGGAGAGAAGGAGGGCGGG
CGCGAGGCGATGAATTAGAGGTCTTCAGTGGCAAGCAGAATCATTCACAT
CTTCTCTGTCCCTGTACCTCACCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCCAACCAGGCGCCACCCCATCCCCTCTCGCTTTGGAATGGCGCGAGCGC
TTCAAGGCAATTTGTTTGTGTAAAAACATGGATGAGCTTGGATTGCCGTC
GTTTATAGCGCAGGTACACAAGGAGGGAGAGAAGGAGGGAAAGGTGTTGG
AGTGTGTGAGATTCGGAAGGAATTGAAATTTTCCTTGATTTTCGCGCAAT
AAGAGAGGTTGGGAAAGAGAGAAGGAGGGAGGAAAGGAGAGAGTGGGTGC
AAAGAGCGCACGGGTATTGTACAGTCGTTTGCATCTTTCATGCTATTTAC
CCTTCCCCCCCTTCATCTCCCCCCTCCTCCCTCCTCTCCTCCAGTGCAAC
GGCAAGCCCATCCTGGTGAAGCACACGGCCAAGTACTACAGGGGCAAGGA
TTACGTCGAGATTGACATCAACATGCACAAATTTGCCTATTTGGCCCGCA
AAGGTATCTCCCTCCCTCCCTCTTTCCCTCCCTCTCTTCCTTTCCTCCCT
GCCCCCCTTCTTTTTCTGCAGGAGCGGTAGACACTCACGCGTTT back to topCoding sequence (CDS) from alignment at scaffold_73:37194..39137- >mRNA_10738 ID=mRNA_10738|Name=jgi.p|Nanoce1779_2|408511|organism=Nannochloropsis oceanica|type=CDS|length=3405bp|location=Sequence derived from alignment at scaffold_73:37194..39137- (Nannochloropsis oceanica)
GCGCCACCCCATCCCCTCTCGCTTTGGAATGGCGCGAGCGCTTCAAGGCA
ATTTGTTTGTGTAAAAACATGGATGAGCTTGGATTGCCGTCGTTTATAGC
GCAGGTACACAAGGAGGGAGAGAAGGAGGGAAAGGTGTTGGAGTGTGTGA
GATTCGGAAGGAATTGAGCTCCCTCGGAGAAGCCTTCCCTCCTCGCGCAA
GAGGACGGTCCCGGCTGGTCTTGTATACTCTACTTCGTCATCAAGCCTGA
CACCGCCCTTGCGTACATCAAGGGCGAGGAGGAGGGAGGGAAGGAGGGAG
GGGTGGCGATGACGGCGGGGATGAAGCTATTTGGCGAGTTCATGCGGAAT
GCAGTGCCGGTGGATGGAGGATCTTCCGGAGGTGAAGGGATTGGAAGGCC
TGCCTGCTCACATCCCAAAAACTCTGGTCGTCACGTGGCAGGTCCGCGCT
CGGGGTTACAAGCAAAGCGGCAAAAAGGAGCCGTCGGCGGCGTCTCTCTA
CAAGCTCGTCAACTTCGACTTTGTCCGCTCCCCATCCCGGGTCTCGCATG
TCGCAAGTTTGGTGCAGATGCCGCCCGTGGGCTCCACCATCCCTCGCTGT
CCTGCCGAGGTGGCGGGTGAGGGGGAGGGGTACGAGATGCCTCCCCACAC
GTGGACGACGGGCCTAGCGAGCAATATCAGGGCGCCACCCCATCCCCTCT
CGCTTTGGAATGGCGCGAGCGCTTCAAGGCAATTTGTTTGTGTAAAAACA
TGGATGAGCTTGGATTGCCGTCGTTTATAGCGCAGGTACACAAGGAGGGA
GAGAAGGAGGGAAAGGTGTTGGAGTGTGTGAGATTCGGAAGGAATTGAGC
TCCCTCGGAGAAGCCTTCCCTCCTCGCGCAAGAGGACGGTCCCGGCTGGT
CTTGTATACTCTACTTCGTCATCAAGCCTGACACCGCCCTTGCGTACATC
AAGGGCGAGGAGGAGGGAGGGAAGGAGGGAGGGGTGGCGATGACGGCGGG
GATGAAGCTATTTGGCGAGTTCATGCGGAATGCAGTGCCGGTGGATGGAG
GATCTTCCGGAGGTGAAGGGATTGGAAGGCCTGCCTGCTCACATCCCAAA
AACTCTGGTCGTCACGTGGCAGGTCCGCGCTCGGGGTTACAAGCAAAGCG
GCAAAAAGGAGCCGTCGGCGGCGTCTCTCTACAAGCTCGTCAACTTCGAC
TTTGTCCGCTCCCCATCCCGGGTCTCGCATGTCGCAAGTTTGGTGCAGAT
GCCGCCCGTGGGCTCCACCATCCCTCGCTGTCCTGCCGAGGTGGCGGGTG
AGGGGGAGGGGTACGAGATGCCTCCCCACACGTGGACGACGGGCCTAGCG
AGCAATATCAGGGCGCCACCCCATCCCCTCTCGCTTTGGAATGGCGCGAG
CGCTTCAAGGCAATTTGTTTGTGTAAAAACATGGATGAGCTTGGATTGCC
GTCGTTTATAGCGCAGGTACACAAGGAGGGAGAGAAGGAGGGAAAGGTGT
TGGAGTGTGTGAGATTCGGAAGGAATTGAGCTCCCTCGGAGAAGCCTTCC
CTCCTCGCGCAAGAGGACGGTCCCGGCTGGTCTTGTATACTCTACTTCGT
CATCAAGCCTGACACCGCCCTTGCGTACATCAAGGGCGAGGAGGAGGGAG
GGAAGGAGGGAGGGGTGGCGATGACGGCGGGGATGAAGCTATTTGGCGAG
TTCATGCGGAATGCAGTGCCGGTGGATGGAGGATCTTCCGGAGGTGAAGG
GATTGGAAGGCCTGCCTGCTCACATCCCAAAAACTCTGGTCGTCACGTGG
CAGGTCCGCGCTCGGGGTTACAAGCAAAGCGGCAAAAAGGAGCCGTCGGC
GGCGTCTCTCTACAAGCTCGTCAACTTCGACTTTGTCCGCTCCCCATCCC
GGGTCTCGCATGTCGCAAGTTTGGTGCAGATGCCGCCCGTGGGCTCCACC
ATCCCTCGCTGTCCTGCCGAGGTGGCGGGTGAGGGGGAGGGGTACGAGAT
GCCTCCCCACACGTGGACGACGGGCCTAGCGAGCAATATCAGGGCGCCAC
CCCATCCCCTCTCGCTTTGGAATGGCGCGAGCGCTTCAAGGCAATTTGTT
TGTGTAAAAACATGGATGAGCTTGGATTGCCGTCGTTTATAGCGCAGGTA
CACAAGGAGGGAGAGAAGGAGGGAAAGGTGTTGGAGTGTGTGAGATTCGG
AAGGAATTGAGCTCCCTCGGAGAAGCCTTCCCTCCTCGCGCAAGAGGACG
GTCCCGGCTGGTCTTGTATACTCTACTTCGTCATCAAGCCTGACACCGCC
CTTGCGTACATCAAGGGCGAGGAGGAGGGAGGGAAGGAGGGAGGGGTGGC
GATGACGGCGGGGATGAAGCTATTTGGCGAGTTCATGCGGAATGCAGTGC
CGGTGGATGGAGGATCTTCCGGAGGTGAAGGGATTGGAAGGCCTGCCTGC
TCACATCCCAAAAACTCTGGTCGTCACGTGGCAGGTCCGCGCTCGGGGTT
ACAAGCAAAGCGGCAAAAAGGAGCCGTCGGCGGCGTCTCTCTACAAGCTC
GTCAACTTCGACTTTGTCCGCTCCCCATCCCGGGTCTCGCATGTCGCAAG
TTTGGTGCAGATGCCGCCCGTGGGCTCCACCATCCCTCGCTGTCCTGCCG
AGGTGGCGGGTGAGGGGGAGGGGTACGAGATGCCTCCCCACACGTGGACG
ACGGGCCTAGCGAGCAATATCAGGGCGCCACCCCATCCCCTCTCGCTTTG
GAATGGCGCGAGCGCTTCAAGGCAATTTGTTTGTGTAAAAACATGGATGA
GCTTGGATTGCCGTCGTTTATAGCGCAGGTACACAAGGAGGGAGAGAAGG
AGGGAAAGGTGTTGGAGTGTGTGAGATTCGGAAGGAATTGAGCTCCCTCG
GAGAAGCCTTCCCTCCTCGCGCAAGAGGACGGTCCCGGCTGGTCTTGTAT
ACTCTACTTCGTCATCAAGCCTGACACCGCCCTTGCGTACATCAAGGGCG
AGGAGGAGGGAGGGAAGGAGGGAGGGGTGGCGATGACGGCGGGGATGAAG
CTATTTGGCGAGTTCATGCGGAATGCAGTGCCGGTGGATGGAGGATCTTC
CGGAGGTGAAGGGATTGGAAGGCCTGCCTGCTCACATCCCAAAAACTCTG
GTCGTCACGTGGCAGGTCCGCGCTCGGGGTTACAAGCAAAGCGGCAAAAA
GGAGCCGTCGGCGGCGTCTCTCTACAAGCTCGTCAACTTCGACTTTGTCC
GCTCCCCATCCCGGGTCTCGCATGTCGCAAGTTTGGTGCAGATGCCGCCC
GTGGGCTCCACCATCCCTCGCTGTCCTGCCGAGGTGGCGGGTGAGGGGGA
GGGGTACGAGATGCCTCCCCACACGTGGACGACGGGCCTAGCGAGCAATA
TCAGG back to top
|