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Properties
| Property Name | Value |
|---|
| TranscriptId | 613467 |
| Track | FilteredModels2 |
| ProteinId | 613381 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_73 | supercontig | scaffold_73:35940..37647 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10737 ID=mRNA_10737|Name=jgi.p|Nanoce1779_2|613381|organism=Nannochloropsis oceanica|type=mRNA|length=1299bp
CTTTGTCACGCATCTTGTGGGTGTCCCTTCTTTCCTTCGCCCGACCATCT
TCGATCTGTATCTTTTGCCATTCATTGATAGTATGAAGGCGCTGGCAGCT
GCAGATGTAACCACTACTCTTGAATCATTCCCCTGTACAAGATTACCATT
CACTCTAAGCCCTTTCCCCTTCCTCTCTTTCTGCCCCTCATCCCTCTCTA
CCCTTCTCTTCCTCTGTTCTCTTCCCTTGCTGTGGTCTGAGGGTAGTCGG
ACTTGTGCTCCCATTCCTCATGTCTCTTTTTTTCTCCCTTCATTTGTGGC
TGAGTCTTATTATAGTTACATTTCTTTCACCTTATTCCTTCCCTTCCACA
TACGCCTTCCATCTCCTAACTTCTTCGTCTGTCTCCCCATTCTTCGTTTG
CCCTTCTCCTGTTTACATGCATGCTTCATTACAACGACTTTTTTTGGCTC
CTACTACCTTTATCGGACTCTTTCGCTCCTTTCGTACGACGGCCGTACCA
CTCCGGGAGTTAGCGACATCCGCTTCCCACACACCGCCCTACAAACACCC
ACGCAATCTCCTCCTTCGCTTCTTCTTCATTCTCTCTTAAACTTGTTTCT
ATACACGATATAATTAAATCCTAATGACCCACTCCTCCTTTCTTTCTTTC
TTTCTTCCCTCCCCTCTTCTCTACGCACCCTCGCTCACTTACAAGCCTCA
CGAGCAAGCGTCCTTATCTTCTCTTTTTCCTTCCCATGCACATGCATACA
TTATATATGCACACGCATACATTATAGATGTTAAAAAACACGACGGCCAC
AAAACAAATAACTACACCAATTCTTCTCTCTCTTCCTCCCCCCTATCCTC
TCATCCATCCGTTCCCCCTAACGGGAGGGGCTCTAGTATTCCAACGCCAC
GCTTTTCTTCACATCAATCTTACAGAACTTGCCTAAGCCCATGACCACCT
CCGGCAGCTCCTCGTCCGTGCGTCCCTCCACGGTGAAGGCGCATTCAAAT
GCCACGAGCTTGAGCTTGTCCTGGAGAATCTGGATGCCTATTGACAGGAA
ATAAGATGGAAGAAAACAGGGAAAAAAAACGCGTGAGTGTCTACCGCTCC
TGCAGAAAAAGAAGGGGGGCAGGGAGGAAAGGAAGAGAGGGAGGGAAAGA
GGGAGGGAGGGAGATACCTTTGCGGGCCAAATAGGCAAATTTGTGCATGT
TGATGTCAATCTCGACGTAATCCTTGCCCCTGTAGTACTTGGCCGTGTGC
TTCACCAGGATGGGCTTGCCGTTGCACTGCGCTATAAACGACGGCAATC back to topprotein sequence of jgi.p|Nanoce1779_2|613381 >mRNA_10737-protein ID=mRNA_10737-protein|Name=jgi.p|Nanoce1779_2|613381|organism=Nannochloropsis oceanica|type=polypeptide|length=177bp
MKALAAADVTTTLESFPCTRLPFTLSPFPFLSFCPSSLSTLLFLCSLPLL
WSEGSRTCAPIPHVSFFLPSFVAESYYSYISFTLFLPFHIRLPSPNFFVC
LPILRLPFSCLHACFITTTFFGSYYLYRTLSLLSYDGRTTPGVSDIRFPH
TALQTPTQSPPSLLLHSLLNLFLYTI* back to topmRNA from alignment at scaffold_73:35940..37647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10737 ID=mRNA_10737|Name=jgi.p|Nanoce1779_2|613381|organism=Nannochloropsis oceanica|type=mRNA|length=1708bp|location=Sequence derived from alignment at scaffold_73:35940..37647+ (Nannochloropsis oceanica)
CTTTGTCACGCATCTTGTGGGTGTCCCTTCTTTCCTTCGCCCGACCATCT
TCGATCTGTATCTTTTGCCATTCATTGATAGTATGAAGGCGCTGGCAGCT
GCAGATGTAACCACTACTCTTGAATCATTCCCCTGTACAAGATTACCATT
CACTCTAAGCCCTTTCCCCTTCCTCTCTTTCTGCCCCTCATCCCTCTCTA
CCCTTCTCTTCCTCTGTTCTCTTCCCTTGCTGTGGTCTGAGGGTAGTCGG
ACTTGTGCTCCCATTCCTCATGTCTCTTTTTTTCTCCCTTCATTTGTGGC
TGAGTCTTATTATAGTTACATTTCTTTCACCTTATTCCTTCCCTTCCACA
TACGCCTTCCATCTCCTAACTTCTTCGTCTGTCTCCCCATTCTTCGTTTG
CCCTTCTCCTGTTTACATGCATGCTTCATTACAACGACTTTTTTTGGCTC
CTACTACCTTTATCGGACTCTTTCGCTCCTTTCGTACGACGGCCGTACCA
CTCCGGGAGTTAGCGACATCCGCTTCCCACACACCGCCCTACAAACACCC
ACGCAATCTCCTCCTTCGCTTCTTCTTCATTCTCTCTTAAACTTGTTTCT
ATACACGATATAATTAAATCCTAATGACCCACTCCTCCTTTCTTTCTTTC
TTTCTTCCCTCCCCTCTTCTCTACGCACCCTCGCTCACTTACAAGCCTCA
CGAGCAAGCGTCCTTATCTTCTCTTTTTCCTTCCCATGCACATGCATACA
TTATATATGCACACGCATACATTATAGATGTTAAAAAACACGACGGCCAC
AAAACAAATAACTACACCAATTCTTCTCTCTCTTCCTCCCCCCTATCCTC
TCATCCATCCGTTCCCCCTAACGGGAGGGGCTCTAGTATTCCAACGCCAC
GCTTTTCTTCACATCAATCTTACAGAACTTGCCTAAGCCCATGACCACCT
CCGGCAGCTCCTCGTCCGTGCGTCCCTCCACGGTGAAGGCGCATTCAAAT
GCCACGAGCCTATGCCATGGAGAGAGGAAGGAAGGAAGGGAGGGAGGGAG
GGAGGGAGGGTAAGAGATAGTGGTCAATGATCAGAGCACCTTGAGACGGG
CGAATGTCCCTCCCTCCTTCCCTTCTTCCCTCTCTCCTTCTATCCCGCTT
TCCGCCCCTCGCCCCGACTCTCCCTCTCAACTCGTACTTGAGCTTGTCCT
GGAGAATCTGGATGCCTATTGACAGGAAATAAGATGGAAGAAAACAGGGA
AAAAAAACGCGTGAGTGTCTACCGCTCCTGCAGAAAAAGAAGGGGGGCAG
GGAGGAAAGGAAGAGAGGGAGGGAAAGAGGGAGGGAGGGAGATACCTTTG
CGGGCCAAATAGGCAAATTTGTGCATGTTGATGTCAATCTCGACGTAATC
CTTGCCCCTGTAGTACTTGGCCGTGTGCTTCACCAGGATGGGCTTGCCGT
TGCACTGGAGGAGAGGAGGGAGGAGGGGGGAGATGAAGGGGGGGAAGGGT
AAATAGCATGAAAGATGCAAACGACTGTACAATACCCGTGCGCTCTTTGC
ACCCACTCTCTCCTTTCCTCCCTCCTTCTCTCTTTCCCAACCTCTCTTAT
TGCGCGAAAATCAAGGAAAATTTCAATTCCTTCCGAATCTCACACACTCC
AACACCTTTCCCTCCTTCTCTCCCTCCTTGTGTACCTGCGCTATAAACGA
CGGCAATC back to topCoding sequence (CDS) from alignment at scaffold_73:35940..37647+ >mRNA_10737 ID=mRNA_10737|Name=jgi.p|Nanoce1779_2|613381|organism=Nannochloropsis oceanica|type=CDS|length=531bp|location=Sequence derived from alignment at scaffold_73:35940..37647+ (Nannochloropsis oceanica)
ATGAAGGCGCTGGCAGCTGCAGATGTAACCACTACTCTTGAATCATTCCC
CTGTACAAGATTACCATTCACTCTAAGCCCTTTCCCCTTCCTCTCTTTCT
GCCCCTCATCCCTCTCTACCCTTCTCTTCCTCTGTTCTCTTCCCTTGCTG
TGGTCTGAGGGTAGTCGGACTTGTGCTCCCATTCCTCATGTCTCTTTTTT
TCTCCCTTCATTTGTGGCTGAGTCTTATTATAGTTACATTTCTTTCACCT
TATTCCTTCCCTTCCACATACGCCTTCCATCTCCTAACTTCTTCGTCTGT
CTCCCCATTCTTCGTTTGCCCTTCTCCTGTTTACATGCATGCTTCATTAC
AACGACTTTTTTTGGCTCCTACTACCTTTATCGGACTCTTTCGCTCCTTT
CGTACGACGGCCGTACCACTCCGGGAGTTAGCGACATCCGCTTCCCACAC
ACCGCCCTACAAACACCCACGCAATCTCCTCCTTCGCTTCTTCTTCATTC
TCTCTTAAACTTGTTTCTATACACGATATAA back to top
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