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Properties
| Property Name | Value |
|---|
| TranscriptId | 613427 |
| Track | FilteredModels2 |
| ProteinId | 613341 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_73 | supercontig | scaffold_73:15628..19159 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10729 ID=mRNA_10729|Name=jgi.p|Nanoce1779_2|613341|organism=Nannochloropsis oceanica|type=mRNA|length=3532bp
ATCAACAAAGCGATAGACGAAGAGAACGGGGTGGATAAACACCGAAAAGC
ATGCATCAGCGTCGTGTCTAATTAATCATTCATATGTCTATTTATATGGG
TACATAACGCCAGGGGGGAAAAGCAGGAATTTTGTTTATGTGTGTGCAGG
AAGGAGAGGGAAAGAGCGGCGTGATATGGAGAATGGGGCAACAGTAGCAG
TACCATCATCATAAACGGCAGCAAAAGCAGCATCTGAGCTAGTGAAAGAA
ATACGAAGAGGGAGAAATGAACAGGGCATCACAAGGGATGGGCAGGGTCT
GCTCCAATCGCAAGGTGCTGCGTGAGAAAACGAGCTGTTTGCCCTCTACC
CTTGCCCTGCTCGTTATTTTTAGTGTTTTTTTCGCCTTTTTCCTTCTTCT
TCTTTTTCACTTTTAGAGCTCGATTTCTTCCGCGCGTTCCCTGTCACACA
TCTCCCACCACCGGTGGGCTTGCTAAGCTGTTACTGCTCGCATCTTCGCG
ATTTTTCTTCTTTTGCTTGTTCTGGTTATTCTCGTTACTCTTATTCTGAC
TCTCCTTCATCTTCTTCCTCTGCTTCTTCGTCTGCTTCCTCTTCTTCTTC
TCTATCTTCCTCTCCTTTTTCCTGCCACGGGTGAGATGAGACACTGAGTT
TTATTCAATCCTCTGGTGTCAACCGACACAGTCATACCGCGCGAAGGTGC
ATTCCAATGCGACGGGATCCTGGAAACGGCTTGTGCCCTATGACAAGACA
GAAGCATTCCCTCACCAAAACCACTGGGCCGTCGACATGAAATGCGCCGG
CGGCGTCCTCACTCTATAGCTTATGCGAACCAAAGTCGGCTCTCTCGCCA
GTACGACGAATCGACCGTCGTGTACGATGTGCCGCCCAATATTCTTGAAC
ACAATGTCGAGGATCTTCGCAAAGAGTGTCACGTGATGCGAACGTTGCTT
CAATGTAACGACCATGAGCTTGACTAGAAAATGTCTAAAGTACACCTAGT
GTATTCTTTTACCGTTTCCCTCCCTCCCTTCCTCGCTCCCTCGCTAGCTC
ACACTCTTCTAGAGAAAGGGCAGAGGGAGAGGACTCCTTCTCCATCCTTC
CCTACAGGCAGGGAGGGAGTAAGATATGTGCCATGTATCACATGGCGATA
GCTCGGAGGGAGAGTGAGAGAGGGAGAGAGTTAGGGAGGGAGAAAGGGAA
GAAGGGAAGGAGGGAGAGAGGGAGGAGGGAGAGCGGGAGAAAGGAGAGAG
GACGTACCTATCAGTAGAAGGTCCCAGCGGGCGTCGTCAAGTCGGGAGTG
AATACTTTGTTTTCCTACACGTTGGCCAAGATGGAAGCATAGCACTGGGG
CTTTTTTGGGGGGGGAGACCTCCCCCCCGAAAAAAAGGTAGACAGGAAAA
AAAACAAAAAAACAAGCTGCCCCCCACGAAAAACATATCTTTCAGAAGCA
GTTTCATCCACCTGCTGGTTTTTGGTGAGTATTTGCTTTCTTAGCCCTCC
TCTTAAGTGTCTGTTCTCTCTGTGCAATGTAACAATGTTGTTTTAGGGGC
CCTGGCACTCAACTCTTTGCAGACGTGAACTAACTTAGTTGTTGTTTTTT
TTCTGCGACGGCTCGCCCTCGCTCTCCATATTTACCGCATTACTAGGACG
GAGAAGTCGAACTTTTCCTCTCCTTCGAGCAGTGCCGTCTAGATGTTTGA
GGTGTTTAGATCGACGTCGATTGCATGTTTGTCTGCGCATAGCTACTGTG
CTATGTATGAATTTATGAATTACCGTTGGGCCCATAGCGCAGCCGTCTCA
GCCAGGGTCTGCTGGCAGACCTCTACCATATGTTATCCCCCCCTTTCACA
ACCCGGGCCGTCTTTTGCCCTTCTGCCTCTGACCTTGCCGCTGTTTCCAG
CACGTACTTGCAGCCTTATTGGCCTGTGGGTTAGGAAGAGAGACATGCCT
ATCCCTTTCGCCTTTTGCCACCACAGGCAGGTGCATCGCTATCGGCGTCT
GACATTTGCGCGCCCCCTCCCGTCCCATCTCTTGTCTCGACACTTTTCTT
TTTCACCTATACGTTCCTCCTCTAAGAACCAAAAATCAGACCACATGCAG
CACATCACCCACAGCACTCTCCCACACCCCACTGACCCACCGGTCTGCTG
ATATTGTGTTCGATGCGTAAGTGCCGGTCTCGCCCCTGGTACTTGGGTAG
CCTAAACAATAGCCAGCAGCTGTCGGAAGGCATGACTGATTTGCGACGCA
TGCACACGAACCCGCACGCCTCCTTCCCCTTCCTCCTCTTCCCTCCTCAC
TCTTCCCTCCACACTCCCTTCTCTCTTCTTCCTTTACCTACCATCTTCCC
TCTCTCCTCCTGTCCTTTTTCCCTCTTCTTCACATTTTCTTCCCCTCCCC
CTTCCCCTCTCCTCTTTTTCTTTTTAGCACTCTTCCTGCTTATCTTCGAA
AACCGCGAGCTATATTCGCAAAAGATTGCAGGCCCCTCCTTCCCCCCATC
CACATCCCCCTCCATTCCTCCTTTCAAATTTCTCTTCATTCCTCTCCTTA
ACACCACTTTCGTGTCATCCTCTTATTCCTTCCCGAGCGGGGCCGTCGTA
GTTCATCAGTTCATGTTATGTGTTTGTGGAAGTCCTGAAAAATTGAGATT
ATACCTGTTAGAAAACGAAATTCAAACGAGATGTAACACTTATATGAAAG
TATGCACCTCGTCTCCTACGTGCCCGCCCCCCCCTTCCTCGTAAACCTTA
CCCGTTTCTCCCTTCCATGTCATTTATCCCTGAATGTTCTGCGCCTCCCC
ATCGCCCCTACTCGCACCCATACCCAAATGTCTGCACGAGACACTTGGCG
CACAGAGTGACACAAACAAATAATTCCTGTCACCTCTTCATTTTACCTCG
TCATAGATAGTGCTTACTTAGTAGATACTGAGCGCTGTCTTCAACGTACC
CCTTCTTGGTCCCAGATTGTGCTTCCTAAGTAGATATTGAAGGCTCTCTT
TACCTGACAGCCCTCTTAAGAATCAGTCAAAGAAGTCACCTACCTCCATT
TTACACTTCACAACATCACTGCAAACAGGCATTTCGTGTAAACGTACGTT
TGCATCATGCAACGCATTTTTTCTCTGCTTGCCCTCGGTATTACCCTCGC
CGTTACGGCGGCTCAAAATGAGATAACTCTCACCTCCATCAGGGCAGTCA
GCGCACATAGGGCGAACAAGGACCTGTGGAGTATGAAGGGCTTCTTCAAC
GACCCTGACGGGACAGTTGTGGATGGCATCAGTGATTTTGGAGTGATCGC
AGGGATTGCAGACAAGGACCAAAACACCCTCAATATGGTTCCATACAGAC
CGATTGAGTGCAGATTGCTCAACAACGACAAAGGACTTGTTTGCAAGACT
ACGGGCACCCGCCTCTTGATCAAGACGACCAAAAGGGTTCCGAAGGGCGC
CACAATTCAGGCGCAGAGGAGCCACAACACAACCACATCCTCCTATTACA
TGCTTTCGGGTGTTTTCCGCCGTCAGGAGTTC back to topprotein sequence of jgi.p|Nanoce1779_2|613341 >mRNA_10729-protein ID=mRNA_10729-protein|Name=jgi.p|Nanoce1779_2|613341|organism=Nannochloropsis oceanica|type=polypeptide|length=194bp
MRKCRSRPWYLGSLNNSQQLSEGMTDLRRMHTNPHASFPFLLFPPHSSLH
TPFSLLPLPTIFPLSSCPFSLFFTFSSPPPSPLLFFFLALFLLIFENREL
YSQKIAGPSFPPSTSPSIPPFKFLFIPLLNTTFVSSSYSFPSGAVVVHQF
MLCVCGSPEKLRLYLLENEIQTRCNTYMKVCTSSPTCPPPPSS* back to topmRNA from alignment at scaffold_73:15628..19159- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10729 ID=mRNA_10729|Name=jgi.p|Nanoce1779_2|613341|organism=Nannochloropsis oceanica|type=mRNA|length=3532bp|location=Sequence derived from alignment at scaffold_73:15628..19159- (Nannochloropsis oceanica)
ATCAACAAAGCGATAGACGAAGAGAACGGGGTGGATAAACACCGAAAAGC
ATGCATCAGCGTCGTGTCTAATTAATCATTCATATGTCTATTTATATGGG
TACATAACGCCAGGGGGGAAAAGCAGGAATTTTGTTTATGTGTGTGCAGG
AAGGAGAGGGAAAGAGCGGCGTGATATGGAGAATGGGGCAACAGTAGCAG
TACCATCATCATAAACGGCAGCAAAAGCAGCATCTGAGCTAGTGAAAGAA
ATACGAAGAGGGAGAAATGAACAGGGCATCACAAGGGATGGGCAGGGTCT
GCTCCAATCGCAAGGTGCTGCGTGAGAAAACGAGCTGTTTGCCCTCTACC
CTTGCCCTGCTCGTTATTTTTAGTGTTTTTTTCGCCTTTTTCCTTCTTCT
TCTTTTTCACTTTTAGAGCTCGATTTCTTCCGCGCGTTCCCTGTCACACA
TCTCCCACCACCGGTGGGCTTGCTAAGCTGTTACTGCTCGCATCTTCGCG
ATTTTTCTTCTTTTGCTTGTTCTGGTTATTCTCGTTACTCTTATTCTGAC
TCTCCTTCATCTTCTTCCTCTGCTTCTTCGTCTGCTTCCTCTTCTTCTTC
TCTATCTTCCTCTCCTTTTTCCTGCCACGGGTGAGATGAGACACTGAGTT
TTATTCAATCCTCTGGTGTCAACCGACACAGTCATACCGCGCGAAGGTGC
ATTCCAATGCGACGGGATCCTGGAAACGGCTTGTGCCCTATGACAAGACA
GAAGCATTCCCTCACCAAAACCACTGGGCCGTCGACATGAAATGCGCCGG
CGGCGTCCTCACTCTATAGCTTATGCGAACCAAAGTCGGCTCTCTCGCCA
GTACGACGAATCGACCGTCGTGTACGATGTGCCGCCCAATATTCTTGAAC
ACAATGTCGAGGATCTTCGCAAAGAGTGTCACGTGATGCGAACGTTGCTT
CAATGTAACGACCATGAGCTTGACTAGAAAATGTCTAAAGTACACCTAGT
GTATTCTTTTACCGTTTCCCTCCCTCCCTTCCTCGCTCCCTCGCTAGCTC
ACACTCTTCTAGAGAAAGGGCAGAGGGAGAGGACTCCTTCTCCATCCTTC
CCTACAGGCAGGGAGGGAGTAAGATATGTGCCATGTATCACATGGCGATA
GCTCGGAGGGAGAGTGAGAGAGGGAGAGAGTTAGGGAGGGAGAAAGGGAA
GAAGGGAAGGAGGGAGAGAGGGAGGAGGGAGAGCGGGAGAAAGGAGAGAG
GACGTACCTATCAGTAGAAGGTCCCAGCGGGCGTCGTCAAGTCGGGAGTG
AATACTTTGTTTTCCTACACGTTGGCCAAGATGGAAGCATAGCACTGGGG
CTTTTTTGGGGGGGGAGACCTCCCCCCCGAAAAAAAGGTAGACAGGAAAA
AAAACAAAAAAACAAGCTGCCCCCCACGAAAAACATATCTTTCAGAAGCA
GTTTCATCCACCTGCTGGTTTTTGGTGAGTATTTGCTTTCTTAGCCCTCC
TCTTAAGTGTCTGTTCTCTCTGTGCAATGTAACAATGTTGTTTTAGGGGC
CCTGGCACTCAACTCTTTGCAGACGTGAACTAACTTAGTTGTTGTTTTTT
TTCTGCGACGGCTCGCCCTCGCTCTCCATATTTACCGCATTACTAGGACG
GAGAAGTCGAACTTTTCCTCTCCTTCGAGCAGTGCCGTCTAGATGTTTGA
GGTGTTTAGATCGACGTCGATTGCATGTTTGTCTGCGCATAGCTACTGTG
CTATGTATGAATTTATGAATTACCGTTGGGCCCATAGCGCAGCCGTCTCA
GCCAGGGTCTGCTGGCAGACCTCTACCATATGTTATCCCCCCCTTTCACA
ACCCGGGCCGTCTTTTGCCCTTCTGCCTCTGACCTTGCCGCTGTTTCCAG
CACGTACTTGCAGCCTTATTGGCCTGTGGGTTAGGAAGAGAGACATGCCT
ATCCCTTTCGCCTTTTGCCACCACAGGCAGGTGCATCGCTATCGGCGTCT
GACATTTGCGCGCCCCCTCCCGTCCCATCTCTTGTCTCGACACTTTTCTT
TTTCACCTATACGTTCCTCCTCTAAGAACCAAAAATCAGACCACATGCAG
CACATCACCCACAGCACTCTCCCACACCCCACTGACCCACCGGTCTGCTG
ATATTGTGTTCGATGCGTAAGTGCCGGTCTCGCCCCTGGTACTTGGGTAG
CCTAAACAATAGCCAGCAGCTGTCGGAAGGCATGACTGATTTGCGACGCA
TGCACACGAACCCGCACGCCTCCTTCCCCTTCCTCCTCTTCCCTCCTCAC
TCTTCCCTCCACACTCCCTTCTCTCTTCTTCCTTTACCTACCATCTTCCC
TCTCTCCTCCTGTCCTTTTTCCCTCTTCTTCACATTTTCTTCCCCTCCCC
CTTCCCCTCTCCTCTTTTTCTTTTTAGCACTCTTCCTGCTTATCTTCGAA
AACCGCGAGCTATATTCGCAAAAGATTGCAGGCCCCTCCTTCCCCCCATC
CACATCCCCCTCCATTCCTCCTTTCAAATTTCTCTTCATTCCTCTCCTTA
ACACCACTTTCGTGTCATCCTCTTATTCCTTCCCGAGCGGGGCCGTCGTA
GTTCATCAGTTCATGTTATGTGTTTGTGGAAGTCCTGAAAAATTGAGATT
ATACCTGTTAGAAAACGAAATTCAAACGAGATGTAACACTTATATGAAAG
TATGCACCTCGTCTCCTACGTGCCCGCCCCCCCCTTCCTCGTAAACCTTA
CCCGTTTCTCCCTTCCATGTCATTTATCCCTGAATGTTCTGCGCCTCCCC
ATCGCCCCTACTCGCACCCATACCCAAATGTCTGCACGAGACACTTGGCG
CACAGAGTGACACAAACAAATAATTCCTGTCACCTCTTCATTTTACCTCG
TCATAGATAGTGCTTACTTAGTAGATACTGAGCGCTGTCTTCAACGTACC
CCTTCTTGGTCCCAGATTGTGCTTCCTAAGTAGATATTGAAGGCTCTCTT
TACCTGACAGCCCTCTTAAGAATCAGTCAAAGAAGTCACCTACCTCCATT
TTACACTTCACAACATCACTGCAAACAGGCATTTCGTGTAAACGTACGTT
TGCATCATGCAACGCATTTTTTCTCTGCTTGCCCTCGGTATTACCCTCGC
CGTTACGGCGGCTCAAAATGAGATAACTCTCACCTCCATCAGGGCAGTCA
GCGCACATAGGGCGAACAAGGACCTGTGGAGTATGAAGGGCTTCTTCAAC
GACCCTGACGGGACAGTTGTGGATGGCATCAGTGATTTTGGAGTGATCGC
AGGGATTGCAGACAAGGACCAAAACACCCTCAATATGGTTCCATACAGAC
CGATTGAGTGCAGATTGCTCAACAACGACAAAGGACTTGTTTGCAAGACT
ACGGGCACCCGCCTCTTGATCAAGACGACCAAAAGGGTTCCGAAGGGCGC
CACAATTCAGGCGCAGAGGAGCCACAACACAACCACATCCTCCTATTACA
TGCTTTCGGGTGTTTTCCGCCGTCAGGAGTTC back to topCoding sequence (CDS) from alignment at scaffold_73:15628..19159- >mRNA_10729 ID=mRNA_10729|Name=jgi.p|Nanoce1779_2|613341|organism=Nannochloropsis oceanica|type=CDS|length=582bp|location=Sequence derived from alignment at scaffold_73:15628..19159- (Nannochloropsis oceanica)
ATGCGTAAGTGCCGGTCTCGCCCCTGGTACTTGGGTAGCCTAAACAATAG
CCAGCAGCTGTCGGAAGGCATGACTGATTTGCGACGCATGCACACGAACC
CGCACGCCTCCTTCCCCTTCCTCCTCTTCCCTCCTCACTCTTCCCTCCAC
ACTCCCTTCTCTCTTCTTCCTTTACCTACCATCTTCCCTCTCTCCTCCTG
TCCTTTTTCCCTCTTCTTCACATTTTCTTCCCCTCCCCCTTCCCCTCTCC
TCTTTTTCTTTTTAGCACTCTTCCTGCTTATCTTCGAAAACCGCGAGCTA
TATTCGCAAAAGATTGCAGGCCCCTCCTTCCCCCCATCCACATCCCCCTC
CATTCCTCCTTTCAAATTTCTCTTCATTCCTCTCCTTAACACCACTTTCG
TGTCATCCTCTTATTCCTTCCCGAGCGGGGCCGTCGTAGTTCATCAGTTC
ATGTTATGTGTTTGTGGAAGTCCTGAAAAATTGAGATTATACCTGTTAGA
AAACGAAATTCAAACGAGATGTAACACTTATATGAAAGTATGCACCTCGT
CTCCTACGTGCCCGCCCCCCCCTTCCTCGTAA back to top
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